Showing : DataFrame • reset
11
votes
17
replies
3.9k
views
SV4Vectors DataFrame bug with haven_labelled data
S4Vectors DataFrame haven_labelled haven
updated 2.9 years ago by ▴ 20 • written 2.9 years ago by ▴ 30
1
vote
3
replies
2.1k
views
Extract specific portion of a string and paste to a new column in R
Rscript tidyr dataframe tidyverse offtopic
updated 3.2 years ago by 700 • written 3.3 years ago by • 0
1
vote
0
replies
3.0k
views
stuck on unimplemented type 'list' in 'EncodeElement'
list save dataframe
updated 3.4 years ago by 4.2k • written 3.4 years ago by ▴ 10
0
votes
1
reply
988
views
How to insert a qvalues column in a dataframe with pvalues in R
qvalues dataframe
updated 3.8 years ago by 53k • written 3.8 years ago by • 0
1
vote
5
replies
4.5k
views
DESeq2 swap ensembl gene id rownames with gene symbol column
deseq2 dataframe ensembl gene id gene symbol entrezid
updated 7 months ago by • 0 • written 5.9 years ago by ▴ 10
1
vote
1
reply
1.1k
views
Checking if to DataFrames are identical
S4Vectors DataFrame
6.2 years ago maltethodberg ▴ 180
5
votes
2
replies
1.4k
views
DataFrame after splitting and back
DataFrame S4Vectors
updated 6.5 years ago by ★ 11k • written 6.5 years ago by 1.6k
2
votes
2
replies
1.6k
views
DataFrame compatible left_join (merge) operation supporting S4 complex columns that never reorders rows
s4 dataframe left_join merge
updated 6.5 years ago by 16k • written 6.5 years ago by ▴ 90
1
vote
5
replies
2.1k
views
DESeq2: differential expression analysis from matrix count with gene annotation
deseq2 dataframe pasilla
updated 6.6 years ago by 43k • written 6.6 years ago by ▴ 30
0
votes
2
replies
1.8k
views
DataFrame matrix subsetting
DataFrame subsetting S4Vectors
updated 6.8 years ago by 16k • written 6.8 years ago by • 0
1
vote
2
replies
1.7k
views
Split AME .tsv file into GRanges object or DataFrame
meme ame motif dataframe granges
updated 7.0 years ago by ★ 11k • written 7.0 years ago by ▴ 60
0
votes
5
replies
5.5k
views
Unable to find an inherited method for function distanceToNearest for signature GRanges
chipenrich granges distancetonearest function dataframe
8.0 years ago rbronste ▴ 60
6
votes
6
replies
7.4k
views
converting a GRangesList object with different lengths into a data frame
genomicranges grangeslist dataframe irangeslist lists
updated 8.2 years ago by ★ 11k • written 8.2 years ago by ★ 1.5k
0
votes
2
replies
1.7k
views
how to build gene.pathway data.frame for non-model organism
limma kegg topgo dataframe edger
8.2 years ago mictadlo ▴ 10
3
votes
2
replies
1.8k
views
matrix as a column of mcols of GRanges would not be extracted correctly by lapply
mcols DataFrame GRanges
updated 8.3 years ago by ★ 11k • written 8.3 years ago by ▴ 30
2
votes
4
replies
2.1k
views
Generic functions for DataFrames of Rle objects ?
DataFrame Rle generic expression table
updated 2.4 years ago by 16k • written 8.4 years ago by ▴ 180
4
votes
10
replies
3.0k
views
Printing DataFrame with nested DataFrames causes error
s4vectors dataframe
updated 8.7 years ago by 16k • written 8.7 years ago by ▴ 70
2
votes
2
replies
1.5k
views
How to conditionally combine IntegerList in the DataFrame more elegantly?
r iranges integerlist DataFrame
updated 9.0 years ago by ▴ 80 • written 9.0 years ago by • 0
2
votes
2
replies
1.6k
views
getting global Fisher score for overlap of 3 GRanges object by element-wise [solved]
r DataFrame fisher-method
9.3 years ago Jurat Shahidin ▴ 80
0
votes
0
replies
999
views
Error in TopologyGSA
topologyGSA dataframe
9.5 years ago saamar.rajput • 0
1
vote
1
reply
2.0k
views
Write the "map" DataFrame from genotypeToSnpMatrix() to a text file
variantannotation DataFrame snpstats
10.0 years ago TimothéeFlutre ▴ 80
21 results • Page 1 of 1
Recent ...
Replies
Comment: Failure to download resources (MeSHDb) from AnnotationHub by Steve Lianoglou ★ 13k
That fixed it, thanks Lori!
Comment: Suppress warning in RHDF5 write by nicolas.lhuillier • 0
Thanks a lot for the quick and effective reply. I had tried "suppressWarnings" but not "suppressMessages".
Answer: Suppress warning in RHDF5 write by James W. MacDonald 68k
``` > fun <- function() message("this is a message") > fun() this is a message > suppressMessages(fun()) > ```
Answer: Failure to download resources (MeSHDb) from AnnotationHub by shepherl 4.2k
apologies. These are contributed by someone outside the core team. On upload I did not realize they included the older Bioconductor storage…
Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k
This should now be resolved
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
Awards • All
Scholar to shepherl 4.2k
Scholar to James W. MacDonald 68k
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