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2
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591
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TnSeq as ZINB? Alternatives in R?
DESeq2 R edgeR Python TnSeq
updated 11 months ago by • 0 • written 12 months ago by ▴ 70
1
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0
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623
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Job: Bioconductor Core developers group opening
R cloud github python git
15 months ago Vincent J. Carey, Jr. 6.7k
0
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1
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760
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Change the interval of bed file
mappability bed python
updated 22 months ago by 64k • written 22 months ago by • 0
0
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1
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692
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python and R
snpeff python tophat r RNAseq123
updated 2.4 years ago by 3.9k • written 2.4 years ago by • 0
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0
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692
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Job: Senior Data Engineer | Poland | remote
AWS BigData Engineer python
2.6 years ago Ewa • 0
1
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2
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1.3k
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DEXSeq Python script dexseq_prepare_annotation.py unable to process my .gtf file
dexseq python gtf gff3 annotation
3.6 years ago Raito92 ▴ 60
1
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2
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1.1k
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Load data with rhdf5
rhdf5 python
updated 9 months ago by • 0 • written 3.6 years ago by • 0
2
votes
4
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926
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Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R python normalization matrix
updated 4.3 years ago by ▴ 30 • written 4.3 years ago by ▴ 10
0
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0
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800
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Job: Bioinformatics Analyst II, Genomics Shared Resource (Seattle, WA)
GENOMICS BIOINFORMATICS SEATTLE R PYTHON Job
4.3 years ago Fred Hutch (Recruiting) ▴ 40
0
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0
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744
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Job: Summer Studentships in Data Science & Computational Biology (2019) at the University of Cambridge
R Python Computational-Biology Cancer Job
4.7 years ago Shamith.Samarajiwa ▴ 180
0
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0
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885
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Job: Bioinformatics Scientist II
bioinformatics scientist python computational Job
4.8 years ago careers • 0
0
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0
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913
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Job: 2 Postdoc Positions in computational epigenetics and non-coding RNA analysis (#CNPD08)
bioinformatician job rna-seq chipseq gsea python Job
5.3 years ago l.brown ▴ 10
1
vote
1
reply
704
views
Python functionality feature request
python bioconductor
updated 5.3 years ago by 25k • written 5.3 years ago by • 0
0
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0
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1.1k
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Job: Bioinformatics Engineer / Data Analyst
python bio ngs linux Job
5.7 years ago EMBL Recruitment • 0
2
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0
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1.1k
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Job: Full-time bioinformatics instructor position at Fred Hutch
R shell Python SQL Job
5.8 years ago ematsen ▴ 20
5
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0
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1.3k
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Job: Summer Studentships in Data Science (Computational Cancer Biology) at the University of Cambridge
R python deep learning machine learning cancer genomics Job
6.7 years ago Shamith.Samarajiwa ▴ 180
0
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0
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1.3k
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Job: Data Scientist / Bioinformatician / Statistician at University of California
R python stats bioinformatics perl Job
7.4 years ago • updated 7.3 years ago clif.duhn • 0
0
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0
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1.7k
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Job: Bioinformatics Programmer (Statistician) at University of California at San Francisco
R bioinformatician job Perl Python statistics Job
7.6 years ago • updated 7.4 years ago clif.duhn • 0
0
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0
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1.5k
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Job: Harvard Medical School: Biomedical Data Scientist Postdoctoral Associate
biomedical informatics data science python SQL Job
7.8 years ago Doe, Aimee ▴ 40
5
votes
23
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5.7k
views
Convertion of indexed bam file to tsv file format
python samtools
updated 8.1 years ago by 16k • written 8.2 years ago by • 0
0
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0
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1.4k
views
DEXSeq analysis of alternative splicing: error 'SAM optional field tag NH not found'
DEXSeq splicing python SAM
8.1 years ago Fiona ▴ 70
3
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4
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1.5k
views
seq2pathway error on Mac OS X
seq2pathway error python mac os x
8.2 years ago termanini ▴ 10
0
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0
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1.5k
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Job: Calling all Clinical Genomic Scientist
computational biology genomics genetics Python java Job
8.4 years ago careers • 0
23 results • Page 1 of 1
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Comment: DiffBind getting Fold values of near 0 by ATpoint ★ 3.6k
Almost certainly data are noisy and DESeq2 (which is used internally) shrinks the fold changes towards zero, because the naive fold changes…
Comment: metagenomeSeq 1.16.0: unique features give NA's for logFC / p-val? by liqiong464 • 0
Hey, I encountered similiar problems now as handibles metentioned. But it seems a bit different somehow. I have 51 samples divided…
Comment: bam or VCF files from GSE75010 by 3 • 0
Because it is so clever and unique, I believe that many more ideas will be inspired by and borrowed from your original concept. [five night…
Comment: How does Deseq2 deal with the row with zero when calculating size factors by 3 • 0
Thank you for sharing. I've read a great deal on relevant topics! Unlike other articles, yours really made an impression on me. I hope you'…
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by 3 • 0
Wonderful blog. It was wonderful to read your writings. This was a pretty fun read for me. I've bookmarked it and can't wait to read more f…
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Comment: Ensembl down???
Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and
Comment: Ensembl down???
Answer: SingleR annotation of several slots/patients
Answer: List of Deprecated Packages for Bioc3.18
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