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PYTHON
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0
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2
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683
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TnSeq as ZINB? Alternatives in R?
DESeq2
R
edgeR
Python
TnSeq
updated 15 months ago by
chaco001
• 0 • written 16 months ago by
David R
▴ 90
1
vote
0
replies
768
views
Job:
Bioconductor Core developers group opening
R
cloud
github
python
git
19 months ago
Vincent J. Carey, Jr.
6.7k
0
votes
1
reply
862
views
Change the interval of bed file
mappability
bed
python
updated 2.2 years ago by
James W. MacDonald
65k • written 2.2 years ago by
the
• 0
0
votes
1
reply
781
views
python and R
snpeff
python
tophat
r
RNAseq123
updated 2.7 years ago by
Kevin Blighe
★ 3.9k • written 2.7 years ago by
kusum
• 0
0
votes
0
replies
794
views
Job:
Senior Data Engineer | Poland | remote
AWS
BigData
Engineer
python
2.9 years ago
Ewa
• 0
1
vote
2
replies
1.4k
views
DEXSeq Python script dexseq_prepare_annotation.py unable to process my .gtf file
dexseq
python
gtf
gff3
annotation
3.9 years ago
Raito92
▴ 60
1
vote
2
replies
1.3k
views
Load data with rhdf5
rhdf5
python
updated 13 months ago by
alex46015
• 0 • written 3.9 years ago by
jose.wo
• 0
2
votes
4
replies
1.1k
views
Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R
python
normalization
matrix
updated 4.6 years ago by
shahryary
▴ 30 • written 4.6 years ago by
mohammedtoufiq91
▴ 10
0
votes
0
replies
895
views
Job:
Bioinformatics Analyst II, Genomics Shared Resource (Seattle, WA)
GENOMICS
BIOINFORMATICS
SEATTLE
R
PYTHON
Job
4.6 years ago
Fred Hutch (Recruiting)
▴ 40
0
votes
0
replies
822
views
Job:
Summer Studentships in Data Science & Computational Biology (2019) at the University of Cambridge
R
Python
Computational-Biology
Cancer
Job
5.0 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
989
views
Job:
Bioinformatics Scientist II
bioinformatics
scientist
python
computational
Job
5.1 years ago
careers
• 0
0
votes
0
replies
1.0k
views
Job:
2 Postdoc Positions in computational epigenetics and non-coding RNA analysis (#CNPD08)
bioinformatician job
rna-seq
chipseq
gsea
python
Job
5.6 years ago
l.brown
▴ 10
1
vote
1
reply
765
views
Python functionality feature request
python
bioconductor
updated 5.6 years ago by
Martin Morgan
25k • written 5.6 years ago by
quijotejmartinez
• 0
0
votes
0
replies
1.2k
views
Job:
Bioinformatics Engineer / Data Analyst
python
bio
ngs
linux
Job
6.0 years ago
EMBL Recruitment
• 0
2
votes
0
replies
1.2k
views
Job:
Full-time bioinformatics instructor position at Fred Hutch
R
shell
Python
SQL
Job
6.2 years ago
ematsen
▴ 20
5
votes
0
replies
1.4k
views
Job:
Summer Studentships in Data Science (Computational Cancer Biology) at the University of Cambridge
R
python
deep learning
machine learning
cancer genomics
Job
7.0 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
1.3k
views
Job:
Data Scientist / Bioinformatician / Statistician at University of California
R
python
stats
bioinformatics
perl
Job
7.7 years ago
clif.duhn
• 0
0
votes
0
replies
1.8k
views
Job:
Bioinformatics Programmer (Statistician) at University of California at San Francisco
R
bioinformatician job
Perl
Python
statistics
Job
7.9 years ago • updated 7.7 years ago
clif.duhn
• 0
0
votes
0
replies
1.9k
views
Job:
Harvard Medical School: Biomedical Data Scientist Postdoctoral Associate
biomedical informatics
data science
python
SQL
Job
8.1 years ago
Doe, Aimee
▴ 40
5
votes
23
replies
6.1k
views
Convertion of indexed bam file to tsv file format
python
samtools
updated 8.5 years ago by
Hervé Pagès
16k • written 8.5 years ago by
malikbashirkhan2
• 0
0
votes
0
replies
1.5k
views
DEXSeq analysis of alternative splicing: error 'SAM optional field tag NH not found'
DEXSeq
splicing
python
SAM
8.5 years ago
Fiona
▴ 70
3
votes
4
replies
1.6k
views
seq2pathway error on Mac OS X
seq2pathway
error
python
mac os x
8.5 years ago
termanini
▴ 10
0
votes
0
replies
1.6k
views
Job:
Calling all Clinical Genomic Scientist
computational biology
genomics
genetics
Python
java
Job
8.8 years ago
careers
• 0
23 results • Page
1 of 1
Recent ...
Replies
Comment: limma models out of memory issue on Slurm HPC
by
Jitendra
▴ 10
thanks Gordon, but our methylation epic array input file is quite big and we can't read it in R by just using laptop memory so we need to …
Comment: Doing comparison of RNA-seq data using EdgeR
by
Michael Love
41k
Just to clarify, when I originally posted the title and tags had listed "DESeq2" and then the post was changed after my answer was added. …
Comment: fgsea fork
by
shepherl
3.8k
Not quite sure what you mean by clone or fork the package on latest version of R. Bioconductor runs all builds on the latest version of R.…
Answer: Doing comparison of RNA-seq data using EdgeR
by
Gordon Smyth
50k
It's pretty easy to do a two-group comparison using edgeR, but you seem to be stuck at the initial stage of reading data into R. If you exp…
Answer: Differing results from plotMDS and PCAtools
by
Gordon Smyth
50k
The reason why the two plots are different is that the first plot is a PCA plot while the second is a biplot. Quite different plots. The P…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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