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2
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15
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4.6k
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BiSeq trimClusters FDR.loc confusion
biseq
fdr
data
results
10.8 years ago • updated 10.7 years ago
mnaymik
▴ 10
2
votes
4
replies
2.0k
views
edgeR, data processing with some missed values
edger
data
analysis
10.6 years ago
Pau Marc Muñoz Torres
▴ 20
1
vote
2
replies
1.8k
views
about transforming a data.frame
data
10.7 years ago
Bogdan
▴ 670
0
votes
1
reply
1.6k
views
Transform data from MoFlo Astrios
transform
flow cytometry
data
updated 9.0 years ago by
SamGG
▴ 360 • written 9.0 years ago by
cr
• 0
2
votes
4
replies
3.6k
views
exporting limma log2 data
limma
export
log2
data
agilent
updated 11.3 years ago by
James W. MacDonald
68k • written 11.3 years ago by
Jahn Davik
▴ 110
1
vote
2
replies
2.6k
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data() doesn't work for fcs files?
flowCore
flowjo
data
updated 11.2 years ago by
Greg Finak
▴ 150 • written 11.2 years ago by
AJC
▴ 10
1
vote
1
reply
1.8k
views
Drug datasets for RNA-seq
rna-seq
data
updated 9.1 years ago by
Gordon Smyth
53k • written 9.1 years ago by
bioinformatics
▴ 30
2
votes
1
reply
1.3k
views
Curated Data Package in Bioconductor
package
data
7.4 years ago
divyswar01
• 0
0
votes
3
replies
3.4k
views
[ExpressionSet] Question: Error in validObject(.Object)
ExpressionSet
Assay
NanoString
Error
Data
updated 3.5 years ago by
James W. MacDonald
68k • written 3.5 years ago by
junli1988
• 0
0
votes
1
reply
1.8k
views
Help With TCGAbiolinks package
TCGAbiolinks
data
normalize
l
updated 4.5 years ago by
Kevin Blighe
★ 4.0k • written 4.5 years ago by
DANIELA
• 0
0
votes
1
reply
1.1k
views
Data visualization
HELP
Data
updated 3.4 years ago by
Guido Hooiveld
★ 4.1k • written 3.4 years ago by
mcclurejenniferc
• 0
0
votes
0
replies
901
views
Prepare data frame of 3 column-lists or matrix of three-column lists from VCF or BAM files
BAM
Segmentation
CINdex
VCF
Data
3.4 years ago
raven1306
• 0
1
vote
0
replies
1.0k
views
Mapping patient dataset onto control dataset
Cytometry
R
Data
3.6 years ago
hamiltond
▴ 10
0
votes
0
replies
1.7k
views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
8.7 years ago
matthew.bashton
• 0
0
votes
0
replies
976
views
Data for cellGrowth package
cellGrowth
data
7.8 years ago
muitalegal888
• 0
0
votes
0
replies
1.5k
views
Job:
Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data
immunology
software
vaccinology
4.4 years ago
Daniel
• 0
1
vote
2
replies
2.7k
views
Dealing With Package Sizes Greater than 5 MB
data
package submission
BiocCheck
6.5 years ago
j.flesch
▴ 10
17 results • Page
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Answer: Are individual-mouse-based statistics possible in CellChat?
by
ATpoint
★ 5.0k
Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/
Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups
by
ATpoint
★ 5.0k
apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Martin Morgan
25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Benjamin
• 0
Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…
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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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