Showing : genomics • reset
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Error in DESeqDataSet(se, design = design, ignoreRank) : all variables in design formula must be columns in colData
deseq2 R genomics
6.3 years ago mokunf • 0
3
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5
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3.1k
views
Element-wise setdiff when psetdiff fails for GenomicRanges
genomicranges iranges genomics
updated 9.3 years ago by ▴ 60 • written 9.3 years ago by ▴ 150
2
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3
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1.7k
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ggbio tracks() function handling x axis in the wrong way
ggbio ggplot2 tracks genomics plot
7.7 years ago oswaldo.lorenzo ▴ 10
0
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1
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1.6k
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Job: Bioinformatics Post-Doc Positions
cancer BIOINFORMATICS genomics RNAseq miRseq Job
9.2 years ago aaron • 0
0
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1
reply
945
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downloading genomic raw data
.raw files raw data genomics
7.2 years ago farahqureshi5 • 0
1
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1
reply
1.2k
views
News: Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology go ontology bioinformatics genomics News
5.6 years ago laurent.albou • 0
0
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1
reply
797
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Job: Computational Biologist at Chinook Therapeutics
RNASeq Bioconductor Genomics
written 2.7 years ago by • 0
0
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1
reply
904
views
Job: 'Omics data analyst for HPCBio, University of Illinois
Metagenomics GenomicVariation Genomics RNASeq ChIPSeq
21 months ago Jenny Drnevich ★ 2.0k
1
vote
1
reply
1.6k
views
How to show chromosome position and SNP label at the same time in x axis
ggbio ggplot2 genomics plot
7.7 years ago oswaldo.lorenzo ▴ 10
0
votes
1
reply
997
views
Job: 3.5 year cancer data scientist postdoc @ UEA, Norwich, UK
prostate cancer machine learning data science genomics Job
4.6 years ago • updated 4.3 years ago Daniel Brewer ▴ 100
0
votes
1
reply
542
views
BioC packages in cancer genomics
genomics cancer
updated 14 months ago by ★ 3.9k • written 14 months ago by ▴ 670
0
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0
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1.7k
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Job: Bioinformatician / NGS Data Analyst (Stark Group, Vienna, Austria)
bioinformatician job ngs genomics Job
9.0 years ago stark • 0
1
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0
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2.2k
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Job: Postdoctoral/Senior Scientist Position in New York City- Mount Sinai School of Medicine
genomics data integration job ngs computational biology Job
8.9 years ago supindab ▴ 10
0
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0
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1.5k
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Job: Come apply for our Epidemiologist, AncestryHealth role
genomics genetics design statistics scientist Job
8.9 years ago careers • 0
0
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0
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1.6k
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Job: Calling all Clinical Genomic Scientist
computational biology genomics genetics Python java Job
8.9 years ago careers • 0
0
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0
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2.0k
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Job: Post-doc/Senior Scientist in Integrative Genomics: Mount Sinai School of Medicine, New York, NY
postdoc genomics Job bioinformatician computational biology
8.7 years ago supindab ▴ 10
0
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0
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1.7k
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Job: Research Scientist in Bioinformatics/Statistical Genomics, Max Planck Institute, Nijmegen, Netherlands
job rnaseq rna-seq genomics data integration Job
8.6 years ago clyde.francks • 0
0
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0
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1.8k
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Job: Data scientist/bioinformatician - Paris
Genomics metabolomics biostatistics data integration Job
8.5 years ago David Enot ▴ 30
1
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0
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1.6k
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Job: Job Opening: Computational Biologists in Cambridge, MA and NYC
ngs computational biology R genomics bioinformatics Job
8.5 years ago mmartin ▴ 20
0
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0
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1.6k
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Job: Computational Biologist (Genome Statistical Analyst) position in CRUK Manchester Institute, UK
job bioinformatics ngs genomics statistics Job
8.2 years ago Hui Sun Leong ▴ 10
0
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0
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1.3k
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Job: Bioinformatics Postdoc in Functional Evolutionary Genomics, Heidelberg, Germany
rnaseq genomics evolution Job
8.1 years ago henrik.kaessmann • 0
1
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0
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1.8k
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Job: PostDoc at Novartis Oncology Basel - Intratumor heterogeneity
cancer genomics postdoc job Job
8.0 years ago Kauffmann, Audrey ▴ 60
2
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0
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1.4k
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Job: Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job GWAS genetics genomics neuro Job
7.9 years ago enridomenici ▴ 10
0
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0
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992
views
Job: Postdoctoral position in computational genomics of cancer at Cold Spring Harbor Laboratory
cancer genomics pharmacogenomics bioinformatics organoid Job
7.9 years ago glt38sheltie • 0
1
vote
0
replies
1.4k
views
Job: Bioinformatics Scientist at NEXUS Personalized Health Technologies in Zurich
clinicaldata translational genomics diagnostics research Job
7.7 years ago Daniel Stekhoven ▴ 10
0
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0
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893
views
Virus NGS data analysis?
genomics
7.4 years ago mathavanbioinfo ▴ 20
0
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0
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1.5k
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Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
7.2 years ago • updated 7.1 years ago Luo Weijun ★ 1.6k
0
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1.3k
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Job: Bioinformaticist, Research Programmer
R genomics statistics Job
7.2 years ago radel • 0
0
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0
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1.5k
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Job: Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics job genomics postdoc obesity Job
7.2 years ago njc65 • 0
1
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0
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1.3k
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Job: Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
computational biology drug development genomics Job
7.0 years ago mmartin ▴ 20
0
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0
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1.3k
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Job: Postdoc in Bioinformatics for Cancer Genomics
cancer genomics bioinformatics machine learning next-generation sequencing Job
6.9 years ago yang4414 • 0
1
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0
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1.3k
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Job: Computational Biologist position in CRUK Manchester Institute, UK
ngs prostate cancer genomics computational biology bioinformatician job Job
6.8 years ago huisun.leong ▴ 10
0
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0
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1.2k
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Job: postdoc 3yrs bioinformatics bacterial population genomics: Wellington, New Zealand
bacteria evolution population genomics Job
6.8 years ago una.ren • 0
3
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0
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2.6k
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Job: PhD opportunity in Cambridge (Computational Biology and Data Science)
cancer deep learning genomics Job computational biology
6.6 years ago • updated 6.5 years ago Shamith.Samarajiwa ▴ 180
0
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0
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1.0k
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Job: Biostatistician III @ Duke University
rnaseq precision medicine biomarker genomics Job
6.2 years ago ram330 • 0
0
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0
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1.2k
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics job biostatistics genomics bioinformatics Job
6.1 years ago xzhousph • 0
0
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0
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1.1k
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Job: Postdoctoral Associate - Cancer Computational Biology
cancer genomics xenograph cloud Job
5.9 years ago tyler.chukwu • 0
0
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0
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1.9k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
5.8 years ago • updated 3.4 years ago Luo Weijun ★ 1.6k
0
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0
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2.6k
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Job: Postdoc in Population Genomics - UC Davis
bioinformatics evolution sequencing genome analysis genomics Job
5.6 years ago hschmidt • 0
1
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0
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1.1k
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Job: 2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics genetics machine learning Job
5.5 years ago gagneur ▴ 10
0
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0
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934
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Job: Stipendium Hungaricum Fellowship with the Computational Biology Group of Semmelweis University
cancer genomics job budapest bioinformatics Job
5.5 years ago Endre Sebestyén ▴ 70
3
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0
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1.2k
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Job: Postdoctoral Scientist position at intersection of Single-Cell Cancer Genomics, Data Science and Bioconductor Software Development
job single-cell data science cancer genomics Job
5.3 years ago Stephanie Hicks ▴ 80
0
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0
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1.0k
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Job: Postdoc in Bioinformatics (UCSF Benioff Children's Hospital Oakland)
Bioinformatics RNA-seq Postdoc Genomics Statistical model Job
5.3 years ago djawaheer • 0
2
votes
0
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995
views
Job: Research Fellow, Computational Cancer Genomics (University College London)
cancer genomics machine learning data integration multi-omics Job
5.3 years ago msecrier ▴ 20
0
votes
0
replies
1.3k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
5.2 years ago • updated 4.4 years ago Luo Weijun ★ 1.6k
0
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0
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932
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Job: Computational Biology / Genomics Internship at Denali Therapeutics
internship genomics genetics Job
5.2 years ago Steve Lianoglou ★ 13k
0
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0
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1.2k
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Job: Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
job biostatistics data science genomics Job
5.1 years ago Patrick Kimes ▴ 10
1
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0
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1.5k
views
Job: Research Assistant position (Fixed Term -12 months initially - application deadline 9th June) in Machine Learning & Computational Cancer Genomics @ …
cancer deep learning genomics Job
5.0 years ago • updated 4.9 years ago Shamith.Samarajiwa ▴ 180
0
votes
0
replies
893
views
Job: Bioinformatics Scientist - BC Cancer Research Center, Vancouver, B
genomics analysis bioinformatics Job
4.9 years ago jmaanaki • 0
1
vote
0
replies
1.0k
views
Job: PhD Studentship in Computational Biology and Machine Learning @ University of Cambridge (application deadline November 15th 2019)
cancer genomics deep learning computational biology Job
4.6 years ago Shamith.Samarajiwa ▴ 180
50 results • Page 1 of 1
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Answer: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0
Hi Michael, I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
Answer: Once again a "Model matrix not full rank" by swbarnes2 ★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results? by Gordon Smyth 50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k
It is true that goseq isn't available for Bioc 3.19 (as at 4 May 2024). In the meantime, you could consider using the goana() and kegga() …
Answer: limma Intercept vs No-intercept models completely changing DMR results? by James W. MacDonald 65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
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Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
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