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2
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1
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86
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News: Bioconductor 3.22 Released!
release Release Bioconductor Software
written 5 days ago by 4.2k
0
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0
replies
518
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News: Bioconductor 3.21 Release Schedule Important Deadlines Approaching
Software Release release
7 months ago shepherl 4.2k
1
vote
0
replies
1.3k
views
News: Bioconductor 3.20 is Released!
Bioconductor Release Software
12 months ago shepherl 4.2k
0
votes
11
replies
2.5k
views
News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
20 months ago • updated 12 months ago shepherl 4.2k
3
votes
4
replies
2.6k
views
News: Bioconductor 3.20 Release Schedule
software release Release
updated 6 months ago by • 0 • written 14 months ago by 4.2k
0
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1
reply
1.6k
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Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
written 3.0 years ago by ★ 3.4k
4
votes
0
replies
1.5k
views
News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
18 months ago shepherl 4.2k
0
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1
reply
1.5k
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News: Bioconductor 3.19 Release Schedule
Release release Software
20 months ago • updated 19 months ago shepherl 4.2k
5
votes
1
reply
1.8k
views
News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 2.0 years ago by 4.2k
2
votes
1
reply
2.3k
views
Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 2.1 years ago by ★ 5.0k • written 2.1 years ago by ▴ 10
0
votes
0
replies
1.5k
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News: Bioconductor 3.18 Release Schedule
Release Software release
2.2 years ago shepherl 4.2k
0
votes
1
reply
775
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Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 2.4 years ago by 68k • written 2.4 years ago by • 0
1
vote
8
replies
2.1k
views
News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 6.6 years ago by 4.2k
0
votes
0
replies
1.2k
views
News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
2.5 years ago shepherl 4.2k
0
votes
0
replies
1.1k
views
News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
2.6 years ago shepherl 4.2k
3
votes
6
replies
1.8k
views
News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 2.6 years ago by • 0 • written 2.7 years ago by 4.2k
1
vote
0
replies
1.4k
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News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
3.0 years ago shepherl 4.2k
0
votes
0
replies
1.2k
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
3.1 years ago shepherl 4.2k
8
votes
0
replies
1.3k
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News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
3.5 years ago shepherl 4.2k
0
votes
0
replies
982
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
3.6 years ago shepherl 4.2k
0
votes
5
replies
2.0k
views
News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
4.1 years ago • updated 3.5 years ago shepherl 4.2k
8
votes
0
replies
1.4k
views
News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
4.0 years ago shepherl 4.2k
0
votes
0
replies
1.4k
views
Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
4.2 years ago Daniel • 0
5
votes
0
replies
1.4k
views
News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
4.5 years ago • updated 4.4 years ago shepherl 4.2k
2
votes
2
replies
2.0k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
4.9 years ago • updated 4.5 years ago shepherl 4.2k
4
votes
0
replies
1.4k
views
News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
5.0 years ago shepherl 4.2k
1
vote
2
replies
1.9k
views
News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
5.1 years ago • updated 5.0 years ago shepherl 4.2k
0
votes
0
replies
1.5k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
5.1 years ago Vincent J. Carey, Jr. 6.7k
2
votes
4
replies
1.7k
views
Bioconductor package development
package R software development
updated 5.1 years ago by 25k • written 5.1 years ago by • 0
3
votes
0
replies
1.9k
views
News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
5.2 years ago • updated 5.1 years ago shepherl 4.2k
0
votes
2
replies
1.2k
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 5.2 years ago by 4.2k • written 5.2 years ago by • 0
0
votes
0
replies
1.4k
views
News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
5.4 years ago shepherl 4.2k
0
votes
2
replies
1.2k
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 5.4 years ago by 68k • written 5.4 years ago by • 0
0
votes
3
replies
1.6k
views
News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 5.5 years ago by ▴ 160 • written 5.6 years ago by 4.2k
4
votes
0
replies
1.2k
views
News: Bioconductor 3.11 is Released!
software bioconductor release packages News
5.5 years ago shepherl 4.2k
0
votes
0
replies
1.3k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.7 years ago shepherl 4.2k
0
votes
1
reply
1.3k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.8 years ago shepherl 4.2k
1
vote
1
reply
1.5k
views
How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 5.9 years ago by ▴ 10 • written 5.9 years ago by ▴ 40
0
votes
0
replies
1.2k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
6.0 years ago shepherl 4.2k
0
votes
2
replies
2.5k
views
News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
6.1 years ago • updated 6.0 years ago shepherl 4.2k
2
votes
2
replies
1.4k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
6.0 years ago shepherl 4.2k
6
votes
0
replies
1.3k
views
News: Bioconductor 3.10 is released!!
release software packages bioconductor News
6.0 years ago shepherl 4.2k
0
votes
0
replies
1.3k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
6.2 years ago • updated 6.1 years ago shepherl 4.2k
2
votes
0
replies
2.8k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
6.1 years ago Laurent Gatto 1.6k
0
votes
1
reply
1.4k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
6.3 years ago • updated 6.2 years ago shepherl 4.2k
0
votes
0
replies
1.1k
views
Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
6.4 years ago jmaanaki • 0
0
votes
3
replies
1.6k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
6.4 years ago shepherl 4.2k
0
votes
1
reply
1.3k
views
News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
6.5 years ago shepherl 4.2k
0
votes
1
reply
1.6k
views
News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
6.7 years ago shepherl 4.2k
0
votes
1
reply
1.6k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 6.8 years ago by 68k • written 6.8 years ago by • 0
57 results • Page 1 of 2
Recent ...
Replies
Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0
It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …
Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k
This should now be resolved
Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k
I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…
Comment: Integration: Paired-end vs healthy single-end from a different source by igkryycpinmshzugby • 0
Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…
Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k
If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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