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1
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368
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News: Bioconductor 3.20 is Released!
Bioconductor Release Software
7 weeks ago shepherl 4.1k
0
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11
replies
1.6k
views
News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
9 months ago • updated 8 weeks ago shepherl 4.1k
3
votes
3
replies
1.1k
views
News: Bioconductor 3.20 Release Schedule
software release Release
updated 9 weeks ago by 52k • written 3 months ago by 4.1k
0
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1
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1.2k
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Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
written 2.1 years ago by ★ 3.4k
4
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0
replies
854
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
7 months ago shepherl 4.1k
0
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1
reply
923
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News: Bioconductor 3.19 Release Schedule
Release release Software
9 months ago • updated 8 months ago shepherl 4.1k
5
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1
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1.3k
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News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 14 months ago by 4.1k
2
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1
reply
1.6k
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Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 15 months ago by ★ 4.6k • written 15 months ago by ▴ 10
0
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0
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1.0k
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News: Bioconductor 3.18 Release Schedule
Release Software release
15 months ago shepherl 4.1k
0
votes
1
reply
593
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Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 18 months ago by 67k • written 18 months ago by • 0
1
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8
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1.7k
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.7 years ago by 4.1k
0
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0
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882
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News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
20 months ago shepherl 4.1k
0
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0
replies
794
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News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
21 months ago shepherl 4.1k
3
votes
6
replies
1.4k
views
News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 21 months ago by • 0 • written 21 months ago by 4.1k
1
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0
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1.1k
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News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
2.1 years ago shepherl 4.1k
0
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0
replies
916
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
2.2 years ago shepherl 4.1k
8
votes
0
replies
1.1k
views
News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
2.7 years ago • updated 2.6 years ago shepherl 4.1k
0
votes
0
replies
799
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
2.7 years ago shepherl 4.1k
0
votes
5
replies
1.6k
views
News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
3.2 years ago • updated 2.7 years ago shepherl 4.1k
8
votes
0
replies
1.2k
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News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
3.2 years ago • updated 3.1 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
3.3 years ago Daniel • 0
5
votes
0
replies
1.2k
views
News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
3.6 years ago shepherl 4.1k
2
votes
2
replies
1.7k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
4.0 years ago • updated 3.6 years ago shepherl 4.1k
4
votes
0
replies
1.1k
views
News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
4.1 years ago shepherl 4.1k
1
vote
2
replies
1.6k
views
News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
4.2 years ago shepherl 4.1k
0
votes
0
replies
1.3k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
4.2 years ago Vincent J. Carey, Jr. 6.7k
2
votes
4
replies
1.4k
views
Bioconductor package development
package R software development
updated 4.2 years ago by 25k • written 4.2 years ago by • 0
3
votes
0
replies
1.7k
views
News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
4.3 years ago • updated 4.2 years ago shepherl 4.1k
0
votes
2
replies
975
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 4.3 years ago by 4.1k • written 4.4 years ago by • 0
0
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0
replies
1.1k
views
News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
4.5 years ago shepherl 4.1k
0
votes
2
replies
990
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 4.6 years ago by 67k • written 4.6 years ago by • 0
0
votes
3
replies
1.3k
views
News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.6 years ago by ▴ 160 • written 4.7 years ago by 4.1k
4
votes
0
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961
views
News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.6 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.8 years ago shepherl 4.1k
0
votes
1
reply
1.0k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.0 years ago shepherl 4.1k
1
vote
1
reply
1.3k
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How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 5.0 years ago by ▴ 10 • written 5.1 years ago by ▴ 40
0
votes
0
replies
1.0k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.1 years ago shepherl 4.1k
0
votes
2
replies
2.0k
views
News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
5.2 years ago • updated 5.1 years ago shepherl 4.1k
2
votes
2
replies
1.2k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
5.1 years ago shepherl 4.1k
6
votes
0
replies
1.1k
views
News: Bioconductor 3.10 is released!!
release software packages bioconductor News
5.1 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.3 years ago • updated 5.2 years ago shepherl 4.1k
2
votes
0
replies
2.5k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
5.2 years ago Laurent Gatto 1.6k
0
votes
1
reply
1.2k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
5.4 years ago • updated 5.3 years ago shepherl 4.1k
0
votes
0
replies
912
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
5.5 years ago jmaanaki • 0
0
votes
3
replies
1.3k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.5 years ago shepherl 4.1k
0
votes
1
reply
1.0k
views
News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.6 years ago shepherl 4.1k
0
votes
1
reply
1.4k
views
News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
5.8 years ago shepherl 4.1k
0
votes
1
reply
1.3k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.9 years ago by 67k • written 5.9 years ago by • 0
0
votes
1
reply
1.3k
views
News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
6.0 years ago shepherl 4.1k
0
votes
0
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1.2k
views
News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.7 years ago shepherl 4.1k
50 results • Page 1 of 1
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Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0
Thanks for your reply!
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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