Showing : software • reset
1
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0
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548
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News: Bioconductor 3.20 is Released!
Bioconductor Release Software
3 months ago shepherl 4.1k
0
votes
11
replies
1.7k
views
News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
11 months ago • updated 3 months ago shepherl 4.1k
3
votes
3
replies
1.3k
views
News: Bioconductor 3.20 Release Schedule
software release Release
updated 3 months ago by 52k • written 4 months ago by 4.1k
0
votes
1
reply
1.2k
views
Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
written 2.2 years ago by ★ 3.4k
4
votes
0
replies
928
views
News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
9 months ago shepherl 4.1k
0
votes
1
reply
1.0k
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News: Bioconductor 3.19 Release Schedule
Release release Software
11 months ago • updated 10 months ago shepherl 4.1k
5
votes
1
reply
1.4k
views
News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 15 months ago by 4.1k
2
votes
1
reply
1.8k
views
Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 16 months ago by ★ 4.6k • written 16 months ago by ▴ 10
0
votes
0
replies
1.1k
views
News: Bioconductor 3.18 Release Schedule
Release Software release
17 months ago shepherl 4.1k
0
votes
1
reply
618
views
Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 20 months ago by 67k • written 20 months ago by • 0
1
vote
8
replies
1.8k
views
News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.8 years ago by 4.1k
0
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0
replies
929
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News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
21 months ago shepherl 4.1k
0
votes
0
replies
828
views
News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
22 months ago shepherl 4.1k
3
votes
6
replies
1.5k
views
News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 22 months ago by • 0 • written 23 months ago by 4.1k
1
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0
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1.1k
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News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
2.2 years ago shepherl 4.1k
0
votes
0
replies
943
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
2.3 years ago shepherl 4.1k
8
votes
0
replies
1.2k
views
News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
2.8 years ago • updated 2.7 years ago shepherl 4.1k
0
votes
0
replies
827
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
2.8 years ago shepherl 4.1k
0
votes
5
replies
1.7k
views
News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
3.3 years ago • updated 2.8 years ago shepherl 4.1k
8
votes
0
replies
1.2k
views
News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
3.3 years ago • updated 3.2 years ago shepherl 4.1k
0
votes
0
replies
1.2k
views
Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
3.4 years ago Daniel • 0
5
votes
0
replies
1.2k
views
News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
3.7 years ago shepherl 4.1k
2
votes
2
replies
1.8k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
4.1 years ago • updated 3.7 years ago shepherl 4.1k
4
votes
0
replies
1.2k
views
News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
4.3 years ago shepherl 4.1k
1
vote
2
replies
1.7k
views
News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
4.3 years ago shepherl 4.1k
0
votes
0
replies
1.3k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
4.3 years ago Vincent J. Carey, Jr. 6.7k
2
votes
4
replies
1.4k
views
Bioconductor package development
package R software development
updated 4.3 years ago by 25k • written 4.3 years ago by • 0
3
votes
0
replies
1.7k
views
News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
4.4 years ago • updated 4.3 years ago shepherl 4.1k
0
votes
2
replies
1.0k
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 4.5 years ago by 4.1k • written 4.5 years ago by • 0
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
4.6 years ago shepherl 4.1k
0
votes
2
replies
1.0k
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 4.7 years ago by 67k • written 4.7 years ago by • 0
0
votes
3
replies
1.3k
views
News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.8 years ago by ▴ 160 • written 4.8 years ago by 4.1k
4
votes
0
replies
985
views
News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.8 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.9 years ago shepherl 4.1k
0
votes
1
reply
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.1 years ago shepherl 4.1k
1
vote
1
reply
1.3k
views
How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 5.2 years ago by ▴ 10 • written 5.2 years ago by ▴ 40
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.2 years ago shepherl 4.1k
0
votes
2
replies
2.1k
views
News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
5.3 years ago • updated 5.2 years ago shepherl 4.1k
2
votes
2
replies
1.2k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
5.2 years ago shepherl 4.1k
6
votes
0
replies
1.1k
views
News: Bioconductor 3.10 is released!!
release software packages bioconductor News
5.3 years ago shepherl 4.1k
0
votes
0
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.4 years ago • updated 5.3 years ago shepherl 4.1k
2
votes
0
replies
2.5k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
5.3 years ago Laurent Gatto 1.6k
0
votes
1
reply
1.2k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
5.5 years ago • updated 5.4 years ago shepherl 4.1k
0
votes
0
replies
932
views
Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
5.6 years ago jmaanaki • 0
0
votes
3
replies
1.3k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
5.7 years ago shepherl 4.1k
0
votes
1
reply
1.1k
views
News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.7 years ago shepherl 4.1k
0
votes
1
reply
1.4k
views
News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
5.9 years ago shepherl 4.1k
0
votes
1
reply
1.4k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 6.1 years ago by 67k • written 6.1 years ago by • 0
0
votes
1
reply
1.3k
views
News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
6.1 years ago shepherl 4.1k
0
votes
0
replies
1.3k
views
News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.8 years ago shepherl 4.1k
50 results • Page 1 of 1
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Answer: I am having issues with bowtie2_build by James W. MacDonald 67k
Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
Answer: DEG analysis across multiple timepoints, treatments and tissues by Michael Love 43k
Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…
Comment: How to visualize these pathways using pathview by Guido Hooiveld ★ 4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10
I see. Thank you ATpoint!
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by Prakash Sah • 0
Thanks James!
Votes
Answer: Unable to install nloptr
Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
C: How does edgeR cpm function calculate log(CPM) values?
Answer: Selection of correct coefficients or contrasts in DESeq2
Answer: Selection of correct coefficients or contrasts in DESeq2
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