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2
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867
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Clarification on GOALL / GO2ALLORFs mapping
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9 months ago • updated 8 months ago Luca • 0
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1
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490
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Discrepancy between Excel TPP-TR reported values and the Melt Curve reported values
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updated 9 months ago by 68k • written 9 months ago by • 0
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3
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1.3k
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Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malformed error
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written 9 months ago by ▴ 110
0
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1
reply
452
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Transcript ID Mismatch in riboWaltz Annotation Table
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updated 9 months ago by 4.2k • written 9 months ago by • 0
0
votes
4
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898
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Using tximport for kallisto aligned TOIL data
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9 months ago Nicholas • 0
0
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1
reply
594
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Reading gene expression data in GPR format and converting it to xlsx format
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updated 9 months ago by 68k • written 9 months ago by • 0
0
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0
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3
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2
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org.Hs.eg.db issue
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written 11 months ago by • 0
0
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2
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782
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updated 9 months ago by 43k • written 9 months ago by ▴ 20
1
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2
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written 9 months ago by • 0
0
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1
reply
697
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library org.Hs.eg.db failing to install
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updated 9 months ago by 68k • written 9 months ago by • 0
0
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1
reply
473
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DESeq use in lipidomic analysis
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updated 9 months ago by 43k • written 9 months ago by • 0
0
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2
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614
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Seeking Advice on HTA 2.0 Microarray Data Processing with Oligo Package
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9 months ago Yao Lipu • 0
0
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1
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468
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Is it possible to model DNA methylation as a dose response in edgeR?
edgeR
updated 10 months ago by 53k • written 10 months ago by • 0
0
votes
0
replies
383
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DiffBind recommendation on using IgG bams
peakcalling DiffBind
10 months ago Harish • 0
0
votes
2
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698
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Conumee2 - CNV.summaryplot()
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updated 10 months ago by 68k • written 10 months ago by • 0
0
votes
1
reply
392
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DepMap data mismatch
depmap
updated 10 months ago by 1.6k • written 10 months ago by ▴ 30
0
votes
4
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2.9k
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Significant DMRs in genes with no single significant CpG using limma
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written 6.4 years ago by • 0
0
votes
3
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1.0k
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how many significant figures are there in DESeq2 output
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updated 10 months ago by ★ 5.0k • written 10 months ago by ▴ 180
0
votes
0
replies
375
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News: GSEA in R/Bioconductor course
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10 months ago info ▴ 10
0
votes
2
replies
547
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graper 1.22 Build is Broken
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updated 10 months ago by 4.2k • written 10 months ago by • 0
0
votes
4
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811
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orgDB
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updated 9 months ago by • 0 • written 10 months ago by • 0
1
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1
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2.1k
views
GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct" and "unused arguments (exprsData = as.matrix(rna_seq_sub), gset.idx…
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updated 10 months ago by ★ 5.0k • written 10 months ago by • 0
0
votes
4
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1.4k
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DiffBind edgeR normalization --- why are the normalization factors all equal to 1?
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updated 9 months ago by • 0 • written 10 months ago by • 0
0
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1
reply
556
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Conumee for EPIC and EPICv2 copy number
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10 months ago Adam • 0
0
votes
1
reply
86
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Spam: '"><svg/onload=prompt(5);>{{7*7}}
org.Sc.sgd.db
10 months ago <iframe onload=alert(document.domain)> 0
0
votes
0
replies
17
views
Spam: <iframe onload=alert(document.domain)>
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10 months ago <iframe onload=alert(document.domain)> 0
0
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1
reply
404
views
Problem using locateVariants() from the VariantAnnotation package
VariantAnnotation vari
10 months ago Marco • 0
0
votes
0
replies
305
views
SpliceWiz crashes when I apply filters, need splicing analysis help
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10 months ago rachel.a.shoemaker • 0
0
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2
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489
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pairedGSEA input files
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updated 9 months ago by ▴ 10 • written 10 months ago by • 0
2
votes
5
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Group-specific condition effects with individuals nested: matrix is not full rank
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10 months ago picasa1983 • 0
0
votes
1
reply
372
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TheProcess got Killed
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updated 10 months ago by 68k • written 10 months ago by • 0
3
votes
7
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2.4k
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Vertical line at A=0, nothing else, on MA plot
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updated 10 months ago by ▴ 10 • written 6.8 years ago by ▴ 20
3
votes
2
replies
814
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SingleCellExperiment convenience function for metadata+expression?
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updated 10 months ago by ▴ 40 • written 11 months ago by • 0
1
vote
2
replies
1.9k
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help documentation for keytypes in annotationdbi packages
annotation
updated 10 months ago by ▴ 10 • written 5.2 years ago by • 0
0
votes
1
reply
902
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How to adjust for Cell Type Differences between groups in Pseudo-Bulk Differential Gene Expression analysis in scRNA-seq?
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updated 10 months ago by 68k • written 10 months ago by • 0
1
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1
reply
688
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Interpreting DESEQ2 interaction term and inclusion of covariate
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updated 10 months ago by ★ 1.4k • written 10 months ago by ▴ 10
0
votes
2
replies
703
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cameraPR() non directional test
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10 months ago Hugo Varet ▴ 80
1
vote
1
reply
463
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DEseq2 design for additive treatment
DESeq2
updated 10 months ago by ★ 5.0k • written 10 months ago by • 0
11
votes
6
replies
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WGCNA with paired samples
wgcna paired samples exercise
updated 10 months ago by • 0 • written 9.4 years ago by ▴ 60
2
votes
2
replies
857
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Plot title for PCA in DESeq2
DESeq2
10 months ago AL • 0
0
votes
0
replies
263
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Error in convertMSImagingArrays2Experiment / estimateDomain in Cardinal
Mass Cardinal
10 months ago Mark Dunning ★ 1.1k
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votes
4
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Use of limma R package with targeted proteomics for DE analysis
DEanalysis limma olinktargetedproteomics
10 months ago svlachavas ▴ 840
0
votes
1
reply
610
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Does anyone have the command to download all of the core_nt using blast_db_get()
rBLAST BiocFileCache
updated 10 months ago by 4.2k • written 10 months ago by ▴ 390
1
vote
2
replies
842
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normalizatino of dna methylation EPIC data
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10 months ago user_bioinfo • 0
1
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2
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Error in retrieving clinical data
TCGAbiolinks
10 months ago • updated 9 months ago silickas • 0
0
votes
0
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10 months ago Maria Doyle ▴ 110
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