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written 3.2 years ago by
Maria Doyle
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Matthew Ritchie
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EuroBioC2024 abstract submission is open!
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Maria Doyle
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Maria Doyle
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• 0 • written 16 months ago by
Maria Doyle
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Maria Doyle
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News:
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News:
Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
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updated 7 months ago by
Ray
• 0 • written 22 months ago by
Maria Doyle
▴ 110
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News:
Bioconductor 3.21 is Released!
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9 months ago
shepherl
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Bioconductor
15 months ago • updated 9 months ago
shepherl
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Gene Set Enrichment Analysis in Bioconductor course
GSEABase
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goseq
11 months ago • updated 10 months ago
info
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News:
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written 24 months ago by
shepherl
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shepherl
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9 months ago
shepherl
4.3k
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Bioconductor Course, Kenya 2025: Applications Open!
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Africa
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11 months ago
Maria Doyle
▴ 110
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626
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News:
EuroBioC2025: Abstract Submissions Open!
EuroBioC2025
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11 months ago
Maria Doyle
▴ 110
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570
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News:
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9 months ago
shepherl
4.3k
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544
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News:
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11 months ago
Maria Doyle
▴ 110
2
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written 11 weeks ago by
shepherl
4.3k
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468
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News:
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Bioconductor
written 11 weeks ago by
shepherl
4.3k
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1
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450
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GSEA in R/Bioconductor course
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written 10 months ago by
info
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Mass Spectrometry and Proteomics with R/Bioconductor course
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11 months ago
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▴ 10
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404
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Save the Date for EuroBioC2026 in Turku!
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written 11 weeks ago by
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403
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written 6 months ago by
shepherl
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News:
Introduction to Epigenomics data analysis with R and Bioconductor course (online) - 14th-18th April
chipseq
MNaseSeq
ATACSeq
9 months ago
info
▴ 10
1
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2
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347
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News:
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written 11 weeks ago by
shepherl
4.3k
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0
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325
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News:
Announcing the GBCC2025 Logo Design Winner!
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GBCC2025
Bioconductor
11 months ago
Maria Doyle
▴ 110
0
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1
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324
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News:
Announcing a New Journal - Bioinformatics Methods and Applications - Now Open for Submissions
Bioconductor
written 6 months ago by
Wei Shi
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News:
EuroBioC2026 abstract submission is open!
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written 7 weeks ago by
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274
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News:
Ensembl 115 has been released!
ensembl
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biomaRt
written 4 months ago by
Ensembl_Jorge
▴ 10
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News:
Upcoming Ensembl API and data access changes - new blog post available
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mart
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written 6 weeks ago by
Ensembl_Jorge
▴ 10
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News:
Opportunity to host EuroBioC2026 Preconference workshops!
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175
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News:
Course: Single-cell analysis with R/Bioconductor
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4 months ago
Ludwig Geistlinger
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News:
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
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9 weeks ago
Maria Doyle
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77
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7 days ago
shepherl
4.3k
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37
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News:
Online RNA-seq analysis course 26-29th Janury
EnhancedVolcano
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5 days ago
Frances Turner
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Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
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Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …
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It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…
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The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
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I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
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