Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Release
•
reset
8
votes
0
replies
893
views
News:
Bioconductor 3.14 is Released!
release
Packages
Software
Release
Bioconductor
2.5 years ago
shepherl
3.9k
8
votes
1
reply
2.8k
views
News:
Bioconductor 3.5 is released
bioconductor
news
release
News
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
Valerie Obenchain
★ 6.8k
8
votes
0
replies
858
views
News:
Bioconductor 3.15 is Released!
Software
Release
Packages
Bioconductor
2.0 years ago
shepherl
3.9k
7
votes
4
replies
1.7k
views
News:
Bioconductor 3.7 is released
bioconductor
release
News
written 6.0 years ago by
Valerie Obenchain
★ 6.8k
7
votes
6
replies
1.8k
views
How to obtain summary statistics for all Bioc releases
bioconductor
release
5.9 years ago
Robert Ivanek
▴ 730
6
votes
0
replies
1.9k
views
News:
Bioconductor 3.4 is released
news
announcement
release
News
7.5 years ago
Hervé Pagès
16k
6
votes
0
replies
857
views
News:
Bioconductor 3.10 is released!!
release
software
packages
bioconductor
News
4.5 years ago
shepherl
3.9k
5
votes
0
replies
1.0k
views
News:
Bioconductor 3.13 is Released!
Release
Bioconductor
Packages
Software
3.0 years ago • updated 2.9 years ago
shepherl
3.9k
5
votes
0
replies
967
views
News:
Bioconductor 3.6 is released
bioconductor
news
release
News
6.5 years ago
Valerie Obenchain
★ 6.8k
5
votes
1
reply
439
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 6 months ago by
shepherl
3.9k
4
votes
0
replies
944
views
News:
Bioconductor 3.12 is Released!
Software
release
Bioconductor
Packages
Release
3.5 years ago
shepherl
3.9k
4
votes
3
replies
907
views
News:
Bioconductor 3.9 is released
bioconductor
release
News
5.0 years ago
shepherl
3.9k
4
votes
0
replies
657
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
20 months ago • updated 19 months ago
shepherl
3.9k
4
votes
11
replies
1.7k
views
News:
Bioconductor 3.8 is released
bioconductor
news
release
News
updated 5.4 years ago by
restat110
• 0 • written 5.5 years ago by
Valerie Obenchain
★ 6.8k
4
votes
0
replies
816
views
News:
Bioconductor 3.11 is Released!
software
bioconductor
release
packages
News
4.0 years ago
shepherl
3.9k
3
votes
0
replies
62
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
3 days ago
shepherl
3.9k
3
votes
0
replies
1.1k
views
News:
Bioconductor 3.3 is released
release
announcement
News
8.0 years ago
Dan Tenenbaum
★ 8.2k
3
votes
9
replies
2.3k
views
Bioconductor docker tags and release versions
docker
release
8.9 years ago • updated 8.6 years ago
Karl Forner
▴ 70
3
votes
0
replies
1.2k
views
News:
Bioconductor 3.5 release
Bioconductor
release
news
News
7.1 years ago
Valerie Obenchain
★ 6.8k
3
votes
3
replies
1.5k
views
Using a single R installation with multiple BioConductor library installations - opinions & best practices sought
version
release
library
updated 9.1 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 9.1 years ago by
Malcolm Cook
★ 1.6k
2
votes
1
reply
1.4k
views
News:
Ensembl 91 is out!
ensembl
biomart
release
ensembl91
News
6.4 years ago
amonida
▴ 20
2
votes
0
replies
750
views
News:
New Package Submission Deadline for Bioc Release 3.8
release
package submission
News
5.6 years ago
shepherl
3.9k
2
votes
3
replies
1.4k
views
News:
List of Deprecated Packages for Bioc3.8
package
release
deprecate
News
5.8 years ago
shepherl
3.9k
2
votes
0
replies
1.1k
views
News:
Bioconductor 3.9 release schedule
bioconductor
release
deadlines
News
5.1 years ago
shepherl
3.9k
1
vote
0
replies
793
views
News:
Bioconductor 3.16 is Released!
Release
Packages
Bioconductor
Software
18 months ago
shepherl
3.9k
1
vote
3
replies
951
views
PureCN Release Notes
PureCN
Release
updated 6.0 years ago by
James W. MacDonald
65k • written 6.0 years ago by
twtoal
▴ 10
1
vote
1
reply
987
views
News:
DEADLINE: commits to Bioc 3.7
release
bioconductor
packages
package updates
News
6.0 years ago
shepherl
3.9k
1
vote
0
replies
400
views
News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
7 months ago
kayla.interdonato
▴ 160
1
vote
0
replies
851
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
2.6 years ago
shepherl
3.9k
1
vote
0
replies
829
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
2.2 years ago
shepherl
3.9k
1
vote
8
replies
1.5k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.1 years ago by
shepherl
3.9k
1
vote
0
replies
827
views
News:
New Package Submission Deadline for Bioc Release 3.9
release
package submission
new packages
deadline
News
5.1 years ago
shepherl
3.9k
1
vote
0
replies
828
views
News:
Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation
release
db0
3.0 years ago
kayla.interdonato
▴ 160
1
vote
1
reply
1.2k
views
News:
Ensembl 90 has been released
ensembl
biomart
ensembl90
release
News
6.7 years ago
Thomas Maurel
▴ 800
1
vote
1
reply
1.0k
views
Rsync Access
release
rsync
873
updated 3.0 years ago by
Martin Morgan
25k • written 3.0 years ago by
workmanld
▴ 10
1
vote
1
reply
919
views
News:
Issues with annotation packages
annotation
news
release
News
4.0 years ago
kayla.interdonato
▴ 160
1
vote
1
reply
792
views
News:
Ensembl 94 has been released
biomart
release
ensembl
ensembl94
ensemblmart
News
5.6 years ago
Thomas Maurel
▴ 800
1
vote
0
replies
989
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
submission
deadline
News
3.6 years ago
shepherl
3.9k
1
vote
0
replies
1.0k
views
News:
Deadline for devel branch 3.8 to pass R CMD build and R CMD check
deadline
release
devel
freeze
News
5.6 years ago
shepherl
3.9k
1
vote
0
replies
735
views
News:
Package Submission Deadline is TODAY!!
release
new submission
package submission
deadline
News
4.6 years ago
shepherl
3.9k
1
vote
0
replies
863
views
News:
Final List of Deprecated Packages for Bioc3.8
deprecate
release
News
5.6 years ago
shepherl
3.9k
1
vote
3
replies
1.3k
views
News:
Initial List of Deprecated Package Bioc 3.9
package
deprecate
release
News
updated 5.5 years ago by
Wolfgang Huber
★ 13k • written 5.5 years ago by
shepherl
3.9k
1
vote
0
replies
768
views
News:
BioC 3.8 release schedule
bioconductor
release
news
News
5.6 years ago
Valerie Obenchain
★ 6.8k
1
vote
2
replies
885
views
Gallus gallus package genome update release
genome
novel
package
release
updated 5.2 years ago by
James W. MacDonald
65k • written 5.2 years ago by
pertille
• 0
1
vote
0
replies
777
views
News:
Bioconductor Release 3.11 Schedule Posted
release
deadlines
builds
packages
News
4.2 years ago
shepherl
3.9k
1
vote
4
replies
551
views
rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene
Bioconductor3.18
DifferentialExpression
release
updated 5 months ago by
Michael Love
41k • written 6 months ago by
Nadine
▴ 60
0
votes
1
reply
879
views
News:
List of Deprecated Packages for Bioc3.8
package
deprecate
release
news
News
6.0 years ago
shepherl
3.9k
0
votes
4
replies
1.6k
views
Why SPADE package has been removed from bioconductor?
spade
release
remove
clustering
updated 6.0 years ago by
James W. MacDonald
65k • written 6.0 years ago by
a.n.horvath
• 0
0
votes
0
replies
915
views
News:
Bioconductor 3.6 release: stop commits to git.bioconductor.org
bioconductor
release
News
6.5 years ago
Valerie Obenchain
★ 6.8k
0
votes
0
replies
924
views
News:
Bioconductor 3.6 release: new package deadline
package submission
bioconductor
release
News
6.6 years ago
shepherl
3.9k
50 results • Page
1 of 1
Recent ...
Replies
Answer: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Hi Michael, I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19 (as at 4 May 2024). In the meantime, you could consider using the goana() and kegga() …
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
Awards
• All
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
• 0
Popular Question
to
Theo
▴ 10
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Locations
• All
Sweden,
4 minutes ago
France,
9 minutes ago
The city by the bay,
26 minutes ago
United Kingdom,
39 minutes ago
India,
51 minutes ago
Traffic: 524 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6