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accesing gene name RNAseq
genetics GeneticsPed Genetics
5 months ago Gülsüm • 0
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Job: Bioinformatics Research Associate, Genomics and Genetics
genomes Genetics
6 months ago JP Carter ▴ 40
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3
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667
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Multiple Testing When Using Multiple Contrasts/Comparisons in DESEQ2
MultipleComparison DESeq2 Genetics contrasts RNASeq
updated 10 months ago by 65k • written 10 months ago by • 0
3
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5
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calculate distance to a certain sequence in one gene
SummarizedExperiment Genetics
updated 12 months ago by 65k • written 12 months ago by • 0
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Job: Postdoctoral research scientist in computational biology/statistical genetics/functional genomics at Columbia University, USA
Alzheimer's StatisticalMethod Genetics molecularQTL FunctionalGenomics
20 months ago gaow • 0
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902
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Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
3.3 years ago António Miguel de Jesus Domingues ▴ 510
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Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
3.6 years ago Vincent J. Carey, Jr. 6.7k
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Job: developer/project management position at Harvard Medical School
softwaredevelopment Job job cloudcomputing genetics
3.6 years ago • updated 3.2 years ago Vincent J. Carey, Jr. 6.7k
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6
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Extremely big genes in annotation TxDb packages
annotation txdb AnnotationData Genetics
updated 3.9 years ago by 65k • written 3.9 years ago by ▴ 10
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DiffBind - Counting reads - counts not found
diffbind differential analysis genetics #chip-seq
updated 5.2 years ago by ★ 5.2k • written 5.2 years ago by • 0
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Job: Computational Biology / Genomics Internship at Denali Therapeutics
internship genomics genetics Job
5.2 years ago Steve Lianoglou ★ 13k
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769
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package for mismatch distribution?
genetics statistics
5.3 years ago myriam.croze07 • 0
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Job: 2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics genetics machine learning Job
5.5 years ago gagneur ▴ 10
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Normalization and Quality Control for Multiple scRNAseq Data Sets
normalization rnaseq genetics batch effect dropout
updated 5.6 years ago by ★ 13k • written 5.6 years ago by • 0
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
5.8 years ago • updated 3.5 years ago Luo Weijun ★ 1.6k
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Get Gene IDs for a list of Gene Names in R
r bioinformatics org.Hs.eg.db genetics
updated 5.9 years ago by 25k • written 5.9 years ago by • 0
1
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973
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co-evolution analysis for RNA
genetics
5.9 years ago tg369 ▴ 40
2
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0
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1.2k
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Job: Statistical Geneticist at Denali Therapeutics, South San Francisco, CA, USA
job genetics drug development neurodegeneration Job
6.0 years ago sandmann.t ▴ 70
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics job biostatistics genomics bioinformatics Job
6.1 years ago xzhousph • 0
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3
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Gene ID Duplicates
deseq2 genetics Tutorial
updated 6.1 years ago by 65k • written 6.1 years ago by • 0
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1.4k
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fisher exact test pairwise associations between gene mutations
genetics
6.7 years ago wasmetqall • 0
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Job: Research Co-ordinator (Full Time)
genetics obesity molecular biology biomedical science Job
6.8 years ago njc65 • 0
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Job: Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
biostatistics genetics Job
7.0 years ago hong.lee • 0
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Job: Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics job genomics postdoc obesity Job
7.2 years ago njc65 • 0
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1.6k
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Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
7.2 years ago • updated 7.1 years ago Luo Weijun ★ 1.6k
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1
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1.2k
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Extension to GoogleGenomics: getVariantCalls
GoogleGenomics genetics variants
7.3 years ago Vincent J. Carey, Jr. 6.7k
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1.7k
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Job: Postdoc / Computational Biologist for circulating tumor DNA/RNA profiling at Memorial Sloan Kettering Cancer Center MSKCC, New York
cancer sequencing genetics genomes diagnostic Job
7.7 years ago dtlabmskcc • 0
0
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0
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959
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What statistical test is appropriate? 2 categorical independent variables, 3 categorical dependent variables, biological replicates
genetics
7.7 years ago efoss ▴ 10
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1.1k
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homologue gene conversion worm to human
biomaRt homologue annotation genetics
7.7 years ago Nemo ▴ 80
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0
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982
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Genetic Association analysis using four siblings among which three were affected and one was normal
genetics plink linkage disequilibrium
7.9 years ago li lilingdu ▴ 450
2
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1.4k
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Job: Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job GWAS genetics genomics neuro Job
7.9 years ago enridomenici ▴ 10
1
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1
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1.5k
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Question about EAGenes (TCGAbiolinks)
annotation cancer biomart genetics R
updated 8.1 years ago by ▴ 260 • written 8.2 years ago by • 0
0
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0
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1.6k
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Job: Calling all Clinical Genomic Scientist
computational biology genomics genetics Python java Job
8.9 years ago careers • 0
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0
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1.5k
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Job: Come apply for our Epidemiologist, AncestryHealth role
genomics genetics design statistics scientist Job
8.9 years ago careers • 0
2
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0
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1.9k
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Job: 23andMe Job Opportunities
bioinformatician job bioinformatics scientist genetics Job
9.0 years ago rgentleman ★ 5.5k
1
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0
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2.0k
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Job: Bioinformatics / Biostatistics in genetic interaction analysis
high-throughput screening interactions genetics jobs image analysis Job
9.1 years ago Bernd Fischer ▴ 550
3
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5
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2.3k
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How to Find Common Dysregulated Genes in Two or More Sets of Microarray Data?
disease genetics micro array data microarray
updated 9.1 years ago by 50k • written 9.1 years ago by ▴ 20
0
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0
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2.1k
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Job: Abbvie -- Senior Manager/Associate Director, Exploratory Statistics
genomics genetics proteomics rnaseq microarray Job
9.2 years ago Feng Hong • 0
0
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3
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2.0k
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Error running makeTranscriptDbFromGFF in GenomicFeatures
Genetics TranscriptDb GenomicFeatures
updated 9.7 years ago by ★ 11k • written 9.7 years ago by ▴ 250
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0
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2.2k
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Plot exon number per gene and transcript lengths
Genetics TranscriptDb GenomicFeatures
9.7 years ago Jon Bråte ▴ 250
2
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0
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2.2k
views
Job: Job Opening: Computational Biologist @ Genentech Bioinformatics
Job Sequencing Genetics Cancer
updated 9.6 years ago by ★ 8.2k • written 9.7 years ago by ★ 11k
1
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1
reply
1.6k
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Question about decideTestsDGE()
Genetics edgeR
updated 9.6 years ago by 50k • written 9.8 years ago by ▴ 250
0
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8
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2.8k
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Expected number of DE genes?
Genetics edgeR DESeq2 Genetics edgeR DESeq2
updated 9.8 years ago by ▴ 750 • written 9.8 years ago by ▴ 140
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1
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3.8k
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DESeq2 - factor base level changes the DE genes.
RNASeq Genetics DESeq2 RNASeq Genetics DESeq2
updated 9.5 years ago by 42k • written 9.8 years ago by ★ 13k
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2
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1.4k
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Can my problem be addressed with Bioconductor?
Genetics GOstats SNPchip topGO Genetics GOstats SNPchip topGO
updated 9.9 years ago by 65k • written 9.9 years ago by ★ 13k
0
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2
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2.0k
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UCSC data anomaly in 50638 transcript(s): the cds cumulative length is
Genetics GO Regression Cancer TranscriptDb Genetics GO Regression Cancer TranscriptDb
updated 10.0 years ago by ▴ 570 • written 10.0 years ago by 16k
0
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1
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1.7k
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limma: percent of variance explained
Genetics limma Genetics limma
updated 10.0 years ago by 50k • written 10.0 years ago by ▴ 90
1
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12
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3.4k
views
Problem running summarizeOverlaps()
Genetics Genetics
updated 8.3 years ago by ▴ 10 • written 10.0 years ago by ▴ 140
0
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2
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1.3k
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RNA-seq pathway analysis in Canis familiaris
RNASeq Genetics Annotation Canis familiaris gage RNASeq Genetics Annotation gage
updated 10.0 years ago by 65k • written 10.0 years ago by ▴ 140
0
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0
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1.5k
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easyRNASeq: Number of total counts
GeneExpression RNASeq Genetics Coverage Normalization BSgenome Biobase Biostrings biomaRt
10.1 years ago Guest User ★ 13k
50 results • Page 1 of 1
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Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call by angelathuynh5 • 0
Thank you for your response. To clarify, the process of making a heatmap performs rowscaling so it takes the value - (mean/std). And to res…
Comment: Limma without eBayes, is it indistunguishable from Ordinary Least Square? by Gordon Smyth 50k
The formula given in the original question is correct and yours is not. Your formula isn't even constrained to be between 0 and 1. Here is …
Comment: Method to find pathways different between 2 groups by Gordon Smyth 50k
sigPathway is another method that does not account for inter-gene correlation and which gives inflated significance, as we showed in our 20…
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu by James W. MacDonald 65k
I doubt you have that many contrasts. I think that is probably the number of rows. What does `dim(fit)` return (and `head(fit$coef)`)?
Answer: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k
If you fit a cell means model (without an intercept), you will have to construct contrasts using `makeContrasts` and fit them using `contra…
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Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
Answer: Extremely small p-values using Limma for proteomic data
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
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