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1.6k
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News:
Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology
go
ontology
bioinformatics
genomics
News
7.2 years ago
laurent.albou
• 0
1
vote
0
replies
1.2k
views
News:
Final List of Deprecated Packages for Bioc3.8
deprecate
release
News
7.2 years ago
shepherl
4.2k
2
votes
0
replies
1.1k
views
News:
New Package Submission Deadline for Bioc Release 3.8
release
package submission
News
7.2 years ago
shepherl
4.2k
1
vote
0
replies
999
views
News:
BioC 3.8 release schedule
bioconductor
release
news
News
7.2 years ago
Valerie Obenchain
★ 6.8k
2
votes
3
replies
1.9k
views
News:
List of Deprecated Packages for Bioc3.8
package
release
deprecate
News
7.4 years ago
shepherl
4.2k
0
votes
0
replies
1.3k
views
News:
ensembl 93 gtfs and fasta twobits have been added to AnnotationHub
annotationhub
ensembl
gtf
2bit
annotationdata
News
7.4 years ago
shepherl
4.2k
1
vote
6
replies
3.6k
views
how to create a NEWS file in R package
news
package
updated 7.4 years ago by
ahlammajid352
• 0 • written 7.4 years ago by
xyluo1991
• 0
0
votes
1
reply
1.2k
views
News:
Ensembl 93 is out!
ensembl mart
ensembl93
biomart
news
News
7.4 years ago
amonida
▴ 20
6
votes
3
replies
3.7k
views
News:
New Bioconductor package for dbSNP151
SNPlocs.Hsapiens.dbSNP151.GRCh38
BSgenome
News
7.5 years ago
Hervé Pagès
16k
3
votes
0
replies
935
views
News:
BioC 2018 Contributed Talks and Workshops Posted
bioc2018
News
7.5 years ago
Martin Morgan
25k
0
votes
1
reply
1.3k
views
News:
List of Deprecated Packages for Bioc3.8
package
deprecate
release
news
News
7.6 years ago
shepherl
4.2k
2
votes
1
reply
1.0k
views
News:
BioC 2018: Poster / Talk / Scholarhip / Workshop deadline May 17!
BioC2018
News
7.6 years ago
Martin Morgan
25k
7
votes
4
replies
2.1k
views
News:
Bioconductor 3.7 is released
bioconductor
release
News
written 7.6 years ago by
Valerie Obenchain
★ 6.8k
1
vote
1
reply
1.3k
views
News:
DEADLINE: commits to Bioc 3.7
release
bioconductor
packages
package updates
News
7.6 years ago
shepherl
4.2k
0
votes
0
replies
1.5k
views
News:
DEADLINE: All packages to pass R CMD build and R CMD check
release
software
experimentdata
workflows
News
7.7 years ago
shepherl
4.2k
3
votes
1
reply
2.8k
views
News:
Latin American BioC Developers Workshop 2018
bioconductor
developers
bioc-devel
News
7.7 years ago
Alejandro Reyes
★ 1.9k
0
votes
0
replies
1.3k
views
News:
ensembl 92 gtfs and fasta twobits have been added to AnnotationHub
ensembl
gtf
2bit
annotationhub
News
7.7 years ago
shepherl
4.2k
0
votes
2
replies
1.7k
views
News:
Final List of Deprecated Packages for Bioc3.7
deprecate
package
release
News
written 7.7 years ago by
shepherl
4.2k
0
votes
0
replies
1.1k
views
News:
Ensembl 92 has been released
biomart
ensembl
release
ensembl92
News
7.7 years ago
Thomas Maurel
▴ 800
0
votes
0
replies
1.3k
views
News:
Release Deadline: Passing R CMD build and R CMD check
package
build
build/check error
check
release
News
7.7 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
Bioconductor New Package Submission Deadline Today!
new submission
release
News
7.7 years ago
shepherl
4.2k
0
votes
0
replies
1.6k
views
News:
SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell
cancer genomics
statistics
News
7.7 years ago
kieranrcampbell
▴ 50
5
votes
5
replies
4.6k
views
News:
Invitation to submit articles to the Bioconductor gateway on F1000Research
publication
News
7.7 years ago
Sean Davis
21k
0
votes
0
replies
1.2k
views
News:
Computational Mass Spectrometry Track at ISMB 2018
proteomics
ISMB
News
7.7 years ago
mnchoi67
▴ 40
0
votes
0
replies
1.1k
views
News:
Bioconductor 3.7 release schedule
bioconductor
news
release
News
7.7 years ago
Valerie Obenchain
★ 6.8k
2
votes
0
replies
1.1k
views
News:
Bioc2018 Toronto: call for abstracts, workshop syllabi, special interest groups
bioc2018
News
7.8 years ago
Levi Waldron
★ 1.1k
0
votes
0
replies
1.4k
views
News:
List of Deprecated Packages for Bioc3.7
package updates
deprecate
release
News
7.8 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
List of Deprecated Packages for Bioc3.7
package updates
deprecate
News
7.8 years ago
shepherl
4.2k
4
votes
0
replies
1.3k
views
News:
Bioconductor at useR! 2018
conference
r
bioconductor
News
7.8 years ago
Matthew Ritchie
▴ 1000
20
votes
13
replies
4.5k
views
News:
markdown is coming to the support site
markdown
News
8.4 years ago • updated 7.8 years ago
Lucas Schiffer
▴ 240
0
votes
0
replies
1.5k
views
News:
Quantitative Genomics 2018 - Thursday 14th of June 2018 at University College London
conference
News
7.8 years ago
Tiphaine Martin
▴ 40
2
votes
0
replies
1.7k
views
News:
LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news
proteomics
course
training
msstats
News
7.9 years ago
mnchoi67
▴ 40
0
votes
1
reply
1.5k
views
News:
List of Deprecated Packages for Bioc3.7
package updates
deprecate
News
7.9 years ago
shepherl
4.2k
1
vote
0
replies
2.5k
views
News:
May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor
training
course
msstats
proteomics
News
7.9 years ago
mnchoi67
▴ 40
1
vote
0
replies
1.6k
views
News:
Ensembl 91 EnsDb databases added to AnnotationHub
annotation
ensembldb
ensembl
News
8.0 years ago
Johannes Rainer
★ 2.1k
1
vote
0
replies
1.8k
views
News:
ensembl 91 gtfs and fasta twobits have been added to AnnotationHub
annotationhub
ensembl
gtf
2bit
News
8.0 years ago
shepherl
4.2k
5
votes
0
replies
2.6k
views
News:
edX online course introducing Bioconductor now up and running
annotation
bioconductor
News
updated 8.0 years ago by
Martin Morgan
25k • written 8.0 years ago by
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.4k
views
News:
List of Deprecated Packages for Bioc 3.7
deprecate
news
package updates
News
8.0 years ago
shepherl
4.2k
0
votes
1
reply
1.5k
views
News:
Single Package Builder Updates and Testing
packages
review
spb
News
8.0 years ago
shepherl
4.2k
2
votes
1
reply
1.9k
views
News:
Ensembl 91 is out!
ensembl
biomart
release
ensembl91
News
8.0 years ago
amonida
▴ 20
4
votes
0
replies
991
views
News:
Map between protein and genome coordinates using ensembldb
ensembdb
annotation
News
8.0 years ago
Johannes Rainer
★ 2.1k
0
votes
2
replies
1.4k
views
News:
List of Deprecated Packages for Bioc3.7
deprecate
News
updated 8.1 years ago by
flipdiving2017
• 0 • written 8.1 years ago by
shepherl
4.2k
0
votes
1
reply
1.8k
views
News:
OrgDbs in AnnotationHub
annotationhub
orgdb
News
8.1 years ago
shepherl
4.2k
0
votes
2
replies
1.7k
views
News:
Single Package Builder / New Package Submission
new submission
build report
packages
News
8.1 years ago
shepherl
4.2k
0
votes
0
replies
3.2k
views
News:
GitHub Repo for reporting issues with Bioconductor.org Website
website
bioconductor
News
8.1 years ago
shepherl
4.2k
0
votes
0
replies
1.2k
views
News:
bioconductor website update
website
bioconductor
News
8.1 years ago
shepherl
4.2k
0
votes
0
replies
1.8k
views
News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
bioconductor
release
devel
News
8.1 years ago
shepherl
4.2k
5
votes
0
replies
7.5k
views
News:
Bioconductor Package Archives
bioconductor
archive
news
News
8.1 years ago
Valerie Obenchain
★ 6.8k
10
votes
0
replies
2.1k
views
News:
European Bioconductor meeting 2017, 4 / 5 - 6 December, Cambridge, UK
news
conference
eurobioc2017
News
8.3 years ago • updated 8.1 years ago
Aaron Lun
★ 29k
5
votes
0
replies
1.2k
views
News:
Bioconductor 3.6 is released
bioconductor
news
release
News
8.1 years ago
Valerie Obenchain
★ 6.8k
345 results • Page
4 of 7
Recent ...
Replies
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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