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News: Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology go ontology bioinformatics genomics News
7.2 years ago laurent.albou • 0
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News: Final List of Deprecated Packages for Bioc3.8
deprecate release News
7.2 years ago shepherl 4.2k
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0
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1.1k
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News: New Package Submission Deadline for Bioc Release 3.8
release package submission News
7.2 years ago shepherl 4.2k
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0
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999
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News: BioC 3.8 release schedule
bioconductor release news News
7.2 years ago Valerie Obenchain ★ 6.8k
2
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3
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News: List of Deprecated Packages for Bioc3.8
package release deprecate News
7.4 years ago shepherl 4.2k
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1.3k
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News: ensembl 93 gtfs and fasta twobits have been added to AnnotationHub
annotationhub ensembl gtf 2bit annotationdata News
7.4 years ago shepherl 4.2k
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how to create a NEWS file in R package
news package
updated 7.4 years ago by • 0 • written 7.4 years ago by • 0
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1.2k
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News: Ensembl 93 is out!
ensembl mart ensembl93 biomart news News
7.4 years ago amonida ▴ 20
6
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3
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News: New Bioconductor package for dbSNP151
SNPlocs.Hsapiens.dbSNP151.GRCh38 BSgenome News
7.5 years ago Hervé Pagès 16k
3
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News: BioC 2018 Contributed Talks and Workshops Posted
bioc2018 News
7.5 years ago Martin Morgan 25k
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News: List of Deprecated Packages for Bioc3.8
package deprecate release news News
7.6 years ago shepherl 4.2k
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1.0k
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News: BioC 2018: Poster / Talk / Scholarhip / Workshop deadline May 17!
BioC2018 News
7.6 years ago Martin Morgan 25k
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4
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News: Bioconductor 3.7 is released
bioconductor release News
written 7.6 years ago by ★ 6.8k
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News: DEADLINE: commits to Bioc 3.7
release bioconductor packages package updates News
7.6 years ago shepherl 4.2k
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1.5k
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News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
7.7 years ago shepherl 4.2k
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2.8k
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News: Latin American BioC Developers Workshop 2018
bioconductor developers bioc-devel News
7.7 years ago Alejandro Reyes ★ 1.9k
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News: ensembl 92 gtfs and fasta twobits have been added to AnnotationHub
ensembl gtf 2bit annotationhub News
7.7 years ago shepherl 4.2k
0
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2
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1.7k
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News: Final List of Deprecated Packages for Bioc3.7
deprecate package release News
written 7.7 years ago by 4.2k
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1.1k
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News: Ensembl 92 has been released
biomart ensembl release ensembl92 News
7.7 years ago Thomas Maurel ▴ 800
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News: Release Deadline: Passing R CMD build and R CMD check
package build build/check error check release News
7.7 years ago shepherl 4.2k
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News: Bioconductor New Package Submission Deadline Today!
new submission release News
7.7 years ago shepherl 4.2k
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1.6k
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News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
7.7 years ago kieranrcampbell ▴ 50
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News: Invitation to submit articles to the Bioconductor gateway on F1000Research
publication News
7.7 years ago Sean Davis 21k
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News: Computational Mass Spectrometry Track at ISMB 2018
proteomics ISMB News
7.7 years ago mnchoi67 ▴ 40
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News: Bioconductor 3.7 release schedule
bioconductor news release News
7.7 years ago Valerie Obenchain ★ 6.8k
2
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1.1k
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News: Bioc2018 Toronto: call for abstracts, workshop syllabi, special interest groups
bioc2018 News
7.8 years ago Levi Waldron ★ 1.1k
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1.4k
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate release News
7.8 years ago shepherl 4.2k
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1.2k
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate News
7.8 years ago shepherl 4.2k
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1.3k
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News: Bioconductor at useR! 2018
conference r bioconductor News
7.8 years ago Matthew Ritchie ▴ 1000
20
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News: markdown is coming to the support site
markdown News
8.4 years ago • updated 7.8 years ago Lucas Schiffer ▴ 240
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News: Quantitative Genomics 2018 - Thursday 14th of June 2018 at University College London
conference News
7.8 years ago Tiphaine Martin ▴ 40
2
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news proteomics course training msstats News
7.9 years ago mnchoi67 ▴ 40
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News: List of Deprecated Packages for Bioc3.7
package updates deprecate News
7.9 years ago shepherl 4.2k
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor training course msstats proteomics News
7.9 years ago mnchoi67 ▴ 40
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1.6k
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News: Ensembl 91 EnsDb databases added to AnnotationHub
annotation ensembldb ensembl News
8.0 years ago Johannes Rainer ★ 2.1k
1
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News: ensembl 91 gtfs and fasta twobits have been added to AnnotationHub
annotationhub ensembl gtf 2bit News
8.0 years ago shepherl 4.2k
5
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2.6k
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News: edX online course introducing Bioconductor now up and running
annotation bioconductor News
updated 8.0 years ago by 25k • written 8.0 years ago by 6.7k
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News: List of Deprecated Packages for Bioc 3.7
deprecate news package updates News
8.0 years ago shepherl 4.2k
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1.5k
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News: Single Package Builder Updates and Testing
packages review spb News
8.0 years ago shepherl 4.2k
2
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1.9k
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News: Ensembl 91 is out!
ensembl biomart release ensembl91 News
8.0 years ago amonida ▴ 20
4
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991
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News: Map between protein and genome coordinates using ensembldb
ensembdb annotation News
8.0 years ago Johannes Rainer ★ 2.1k
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News: List of Deprecated Packages for Bioc3.7
deprecate News
updated 8.1 years ago by • 0 • written 8.1 years ago by 4.2k
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1.8k
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News: OrgDbs in AnnotationHub
annotationhub orgdb News
8.1 years ago shepherl 4.2k
0
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2
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1.7k
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News: Single Package Builder / New Package Submission
new submission build report packages News
8.1 years ago shepherl 4.2k
0
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3.2k
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News: GitHub Repo for reporting issues with Bioconductor.org Website
website bioconductor News
8.1 years ago shepherl 4.2k
0
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1.2k
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News: bioconductor website update
website bioconductor News
8.1 years ago shepherl 4.2k
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News: Dockers have been updated for Bioc3.6 and Bioc3.7
docker bioconductor release devel News
8.1 years ago shepherl 4.2k
5
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News: Bioconductor Package Archives
bioconductor archive news News
8.1 years ago Valerie Obenchain ★ 6.8k
10
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News: European Bioconductor meeting 2017, 4 / 5 - 6 December, Cambridge, UK
news conference eurobioc2017 News
8.3 years ago • updated 8.1 years ago Aaron Lun ★ 29k
5
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News: Bioconductor 3.6 is released
bioconductor news release News
8.1 years ago Valerie Obenchain ★ 6.8k
345 results • Page 4 of 7
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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