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46,560 results • Page 1 of 932
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Comment: competitive enrichment test yields too few significant results, self-contained t by bbao ▴ 10
Hi Gordon, Thanks for the advice, I gave camera a try, and it yielded around ~1,000 statistically significant gene sets from the same 11,0…
Answer: competitive enrichment test yields too few significant results, self-contained t by Gordon Smyth 52k
Actually, preranked GSEA is known to be highly anti-conservative, because it ignores inter-gene correlations, and can give significant resu…
Comment: competitive enrichment test yields too few significant results, self-contained t by ATpoint ★ 4.9k
Lets see your code. 8000 significant genesets indicate a flaw somewhere.
Comment: Install old version of DESeq2 by James W. MacDonald 68k
To add to what Lori asks, this builds for me, using Dockerhub on Windows: ``` C:\Users\jmacdon\Desktop>docker build . [+] Building 477.7s …
Comment: How to do simple Fisher' exact test for overlapped genomic interval in R? by Keepa • 0
https://nowtext.app/
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Comment: competitive enrichment test yields too few significant results, self-contained t
Answer: competitive enrichment test yields too few significant results, self-contained t
Regarding the issue of background genes in enrichment analysis
Best practice for handling large data (matrix with >2^31-1 non-zero elements) in SingleCellExperiment?
Comment: How can I avoid artifacts in gene set/pathway scoring by UCell and similar algor
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