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Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCPlus)
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Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
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updated 25 days ago by ★ 4.0k • written 5 months ago by • 0
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updated 25 days ago by ★ 4.0k • written 5 months ago by • 0
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268
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CRISPRSeek Question: changing weight and gRNA.size causes error
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263
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updated 27 days ago by 1.6k • written 3 months ago by • 0
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Must I do pseudobulk analysis on Cell Surface Protein Labeling data of Single Cell RNA Sequencing
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updated 28 days ago by ★ 4.0k • written 3 months ago by • 0
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org.Ss.eg.db MAMDC4 maps to incorrect UNIPROT key
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315
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Length of 'dimnames' [1] not equal to array extent
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updated 28 days ago by ★ 4.0k • written 3 months ago by • 0
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1
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331
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46,695 results • Page 1 of 934
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Replies
Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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