Bioconductor Forum

5

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dexseq bitseq cuffdiff Differential exon usage isoforms

10.8 years ago • updated 10.7 years ago elle ▴ 10

0

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16

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Clustering Clustering

updated 21.5 years ago by Stephen Henderson ★ 1.0k • written 21.5 years ago by cstrato ★ 3.9k

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updated 18.7 years ago by James W. MacDonald 68k • written 18.7 years ago by Siarhei Manakou ▴ 100

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18.6 years ago Ingrid H. G. Østensen ▴ 700

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updated 13.4 years ago by James W. MacDonald 68k • written 13.4 years ago by Guest User ★ 13k

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updated 17.7 years ago by Sean Davis 21k • written 17.7 years ago by Harpreet Saini ▴ 20

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genesetenrichment pathways reactome.db

updated 10.9 years ago by willem.ligtenberg ▴ 150 • written 11.3 years ago by Guangchuang Yu ★ 1.2k

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updated 20.8 years ago by Seth Falcon ★ 7.4k • written 20.8 years ago by Robert Citek ▴ 120

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updated 21.3 years ago by John Zhang ★ 2.9k • written 21.3 years ago by Liu, Xin ▴ 130

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updated 18.7 years ago by Seth Falcon ★ 7.4k • written 18.8 years ago by ssls sddd ▴ 260

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limma limma

updated 21.4 years ago by Sailendra Gummadi ▴ 10 • written 21.4 years ago by karen ▴ 30

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updated 21.6 years ago by James W. MacDonald 68k • written 21.6 years ago by mcolosim@brandeis.edu ▴ 70

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updated 19.3 years ago by Darlene Goldstein ▴ 230 • written 19.3 years ago by Ingrid H. G. Østensen ▴ 700

1

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15

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4.8k

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sgseq

updated 9.4 years ago by Leonard Goldstein ▴ 260 • written 9.6 years ago by Sylvain Foisy ▴ 80

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annotation orgdb

10.1 years ago knishida ▴ 20

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20

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HiTC gothic diffhic HiC

10.5 years ago Bogdan ▴ 670

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8

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gviz

updated 10.7 years ago by florian.hahne@novartis.com ★ 1.6k • written 11.1 years ago by Bogdan ▴ 670

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9

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RUV ruvseq rnaseq

10.9 years ago sergio.espeso-gil • 0

1

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14

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biocinstaller source

10.3 years ago michel.renou • 0

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8

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updated 20.1 years ago by Seth Falcon ★ 7.4k • written 20.1 years ago by Amy Mikhail ▴ 460

6

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14

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genomicalignments RNASeq genomicfeatures summarizeoverlaps

updated 11.2 years ago by Gordon Smyth 53k • written 11.2 years ago by bioprog • 0

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7

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simpleaffy simpleaffy

21.7 years ago kfbargad@lg.ehu.es ▴ 260

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10

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Rsubread

updated 9.6 years ago by Wei Shi ★ 3.6k • written 9.7 years ago by MWSchmid • 0

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10

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limma limma

updated 21.6 years ago by A.J. Rossini ▴ 810 • written 21.6 years ago by michael watson IAH-C ★ 3.4k

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computer

written 19.9 years ago by Lance Palmer ▴ 60

1

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8

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boxplot microarray pd.hugene.2.0.st

10.9 years ago kanacska ▴ 10

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8

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CRISPRseek

11.4 years ago • updated 10.8 years ago Julie Zhu ★ 4.3k

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8

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cdf affy gcrma matchprobes plier cdf affy gcrma matchprobes plier

updated 19.8 years ago by Seth Falcon ★ 7.4k • written 19.8 years ago by Mohammad Esad-Djou ▴ 520

28

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25

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7.6k

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Gviz rtracklayer

updated 8.7 years ago by aina.jene ▴ 10 • written 9.1 years ago by Ramiro Magno ▴ 100

0

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12

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mgu74av2 probe affy mgu74av2 probe affy

updated 22.0 years ago by Ron Ophir ▴ 80 • written 22.0 years ago by Johnnidis, Jonathan ▴ 50

3

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9

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6.2k

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deseq2 ruvseq sizefacotrs

updated 10.8 years ago by davide risso ▴ 980 • written 10.8 years ago by Assa Yeroslaviz ★ 1.5k

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7

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DiffBind diffbind

updated 11.3 years ago by Rory Stark ★ 5.3k • written 11.4 years ago by sergio.espeso-gil • 0

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6

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AnnBuilder AnnBuilder

23.7 years ago Barry Henderson ▴ 250

8

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14

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msa msaprettyprint() fasta

updated 8.8 years ago by tongtong.wang1210 • 0 • written 9.1 years ago by Olorin ▴ 50

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7

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Annotation GO BSgenome BSgenome ChIPpeakAnno Annotation GO BSgenome BSgenome ChIPpeakAnno

updated 16.0 years ago by Ivan Gregoretti ▴ 310 • written 16.0 years ago by Julie Zhu ★ 4.3k

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6

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3.0k

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flowcore spillover flowcytometry

updated 8.1 years ago by Samuel Ahuno • 0 • written 10.0 years ago by Daniel Prieto • 0

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10

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6.0k

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chipseeker

updated 10.4 years ago by Guangchuang Yu ★ 1.2k • written 10.4 years ago by francesca casalino ▴ 50

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7

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Microarray Normalization probe lumi Microarray Normalization probe lumi

updated 16.5 years ago by die_stevie@web.de ▴ 50 • written 16.5 years ago by Stefanie Figura ▴ 30

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9

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updated 18.7 years ago by Paquet, Agnes ▴ 500 • written 18.7 years ago by Peter White ▴ 80

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10

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3.4k

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19.8 years ago john seers IFR ▴ 810

0

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7

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2.4k

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limma limma

updated 20.0 years ago by Gordon Smyth 53k • written 20.0 years ago by michael watson IAH-C ★ 3.4k

0

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8

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Normalization probe affy affyPLM Normalization probe affy affyPLM

20.2 years ago Naomi Altman ★ 6.0k

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7

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updated 21.7 years ago by A.J. Rossini ▴ 810 • written 21.7 years ago by michael watson IAH-C ★ 3.4k

0

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8

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Pathways GO Survival Cancer Organism annotate affydata vsn AnnBuilder globaltest GO vsn

updated 19.3 years ago by David Lapointe ▴ 190 • written 19.3 years ago by John Zhang ★ 2.9k

0

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12

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2.8k

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updated 17.1 years ago by Pedro López Romero ▴ 360 • written 17.1 years ago by Erika Melissari ▴ 250

8

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16

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4.2k

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genomicfeatures txdb

updated 10.8 years ago by Marc Carlson ★ 7.2k • written 10.8 years ago by Diego Diez ▴ 760

5

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11

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3.1k

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ChIPQC

updated 8.4 years ago by Thomas Carroll ▴ 420 • written 8.4 years ago by Victor Goitea ▴ 10

1

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17

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6.8k

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Normalization edgeR DESeq Normalization edgeR DESeq

14.8 years ago Xiaohui Wu ▴ 280

13

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20

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16k

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EdgeR TCGA normalized count

updated 11.0 years ago by alakatos ▴ 130 • written 11.0 years ago by ycding ▴ 20

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8

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updated 18.6 years ago by alex lam RI ▴ 310 • written 18.6 years ago by carol white ▴ 680