Post does not exist.
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compute_fasta_digest does not match Salmon index hash
tximeta
updated 6 hours ago by 43k • written 8 days ago by • 0
0
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0
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11
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News: Epigenomics data analysis with R and Bioconductor
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8 hours ago info ▴ 10
1
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2
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updated 13 hours ago by 68k • written 16 hours ago by • 0
0
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393
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News: List of Deprecated Packages for Bioc3.20
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5 months ago • updated 15 hours ago shepherl 4.1k
0
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1
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68
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Issue with Soft-Thresholding in WGCNA
WGCNA
updated 5 hours ago by • 0 • written 21 hours ago by • 0
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17
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Spam: Experience lasting confidence with Vidalista 40 mg
org.Sc.sgd.db
2 days ago irenejoshi07 0
1
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2
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Help with the code for "BiocNeighbors::generic_find_knn() function used by scran::quickCluster()
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4 days ago • updated 3 days ago Arctic • 0
0
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1
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492
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DESeq2
org.Mmu.eg.db DESeq2 TimeCourse DMSOvsdrug RNASeqData
updated 4 days ago by ★ 4.8k • written 5 days ago by • 0
0
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1
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484
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Mismatch between Illumina Mouse Methylation BeadChip annotation and genome browsers (UCSC/Ensembl)
methylationArrayAnalysis MethylationArrayData
updated 5 days ago by 68k • written 5 days ago by • 0
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Package developing and interoperation with Bioconductor
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6 days ago • updated 5 days ago slizchap • 0
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6
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Surprising behavior for DEXseq dispersion estimate plot?
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updated 5 days ago by ★ 4.8k • written 28 days ago by • 0
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4
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Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files
tximport rhdf5
6 days ago • updated 1 day ago Sofia • 0
1
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1
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715
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ComBat with repeated measures
ComBat sva
updated 5 days ago by ★ 4.8k • written 6 days ago by • 0
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37
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News: List of Deprecated Packages for Bioc3.21
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6 days ago shepherl 4.1k
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News: Bioconductor 3.21 Release Schedule Important Deadlines Approaching
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Correlation threshold
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7 days ago user_bioinfo • 0
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4
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Spam: Does Spirit give free refunds?
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8 days ago Haggu 10
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Spam: Can I change my BA flight to another date?
org.Sc.sgd.db MafDb.1Kgenomes.phase1.GRCh38 ncdfFlow
8 days ago Haggu 10
1
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22
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Spam: What is the cheapest day to fly on American Airlines? {Ask_Expert}
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Spam: Can I cancel my British Airways flight and get a refund?
CAGEr gep2pep hcg110.db
8 days ago Haggu 10
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8
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Spam: vjkftykdtyk
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2
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Improving performance of edgeR and limma while adjusting for multiple confounders
edgeR limma
updated 7 days ago by ★ 4.8k • written 8 days ago by • 0
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384
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Merging EPICV1 and V2 betas
minfiDataEPIC minfi
updated 6 days ago by • 0 • written 8 days ago by • 0
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1
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167
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Error in cnetplot
enrichplot clusterProfiler
updated 8 days ago by ★ 4.1k • written 14 days ago by • 0
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3
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482
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getBM from biomaRt inconsistencies found with .gtf files across multiple species
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How do I set up my DESeq analysis when I know a few vehicle control samples provide background effects we don't want to see in any of the subsequent …
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8 days ago Simran • 0
1
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1
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133
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Merging annotation with differential expression output
annotation RNASeqData
updated 8 days ago by 68k • written 9 days ago by • 0
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Annotation package for Manduca sexta
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9 days ago • updated 7 days ago GA ▴ 10
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9 days ago kagodwi2 • 0
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4
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Ensembl site unresponsive via biomaRt
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0
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146
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best way to grouping GSM belonging to different datasets (with different platforms) and compare differential gene expression
GEOquery
updated 9 days ago by 68k • written 12 days ago by • 0
1
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2
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1
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185
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GAGE kegg.gsets() self-signed certificate error
gageData gage
15 days ago • updated 13 days ago Lucas • 0
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2
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247
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myvariant error
myvariant getVariants
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0
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4
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Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Analysis
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0
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0
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DiffBind multi-tissue comparison
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16 days ago lryrainche • 0
1
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2
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391
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affy::rma results doesn't match with ncbi website
affy Preprocessing Microarray
updated 16 days ago by 68k • written 18 days ago by • 0
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4
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264
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Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene
TxDb.Mmusculus.UCSC.mm10.knownGene
16 days ago • updated 15 days ago Wolfgang RAFFELSBERGER ▴ 140
0
votes
0
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108
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fgsea: ranking genes using log2FC and pvalues derived from spline model
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17 days ago GT • 0
1
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1
reply
771
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Use of org.Rn.eg.db with GRCr8 reference genome
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updated 19 days ago by 68k • written 19 days ago by • 0
0
votes
2
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611
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Clarification on GOALL / GO2ALLORFs mapping
org.Sc.sgd.db
20 days ago • updated 14 days ago DavideSant • 0
2
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2
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Limma - Complex 2-way multi-level contrast with paired samples
edgeR contrastmatrix limma
22 days ago • updated 16 days ago Elizabeth • 0
1
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2
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[ChIP-seq] DESeq2 on counts matrix from union set of called peaks
csaw ChIPseq DESeq2 DiffBind
22 days ago • updated 21 days ago Luca • 0
0
votes
1
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280
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Discrepancy between Excel TPP-TR reported values and the Melt Curve reported values
TPP
updated 21 days ago by 68k • written 22 days ago by • 0
1
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3
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828
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Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malformed error
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