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News:
Bioconductor Long-term Contribution Award
Bioc2023
Bioconductor
Awards
Recognition
12 months ago
shepherl
3.9k
0
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0
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518
views
News:
Nominations for Bioconductor 2023 Awards!
Awards
Bioconductor
Bioc2023
Recognition
13 months ago • updated 12 months ago
shepherl
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0
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514
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News:
course - single-cell RNAseq data analysis with R and Bioconductor
Workshop
scRNAseq
12 months ago
info
▴ 10
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0
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1.1k
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News:
Join the Technical Advisory Board
Bioconductor
News
Organization
12 months ago
Maria Doyle
▴ 70
1
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8
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1.5k
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News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.2 years ago by
shepherl
3.9k
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607
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News:
RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor
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Community
Training
12 months ago
Maria Doyle
▴ 70
0
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0
replies
525
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News:
Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training
Bioconductor
Event
Community
Tutorial
13 months ago
Maria Doyle
▴ 70
0
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0
replies
613
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News:
Bioconductor 3.17 is Released!
Packages
Release
Bioconductor
Software
13 months ago
shepherl
3.9k
1
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0
replies
514
views
News:
Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training
Bioconductor
Event
Community
News
13 months ago
Maria Doyle
▴ 70
1
vote
0
replies
769
views
News:
Biological Data Science summer school 11-16 June in Brixen/Bressanone.
csama
13 months ago
Wolfgang Huber
★ 13k
0
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0
replies
528
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News:
EuroBioC2023 abstract submission closing soon!
presentation
EuroBioc2023
Conference
community
Bioconductor
13 months ago
Maria Doyle
▴ 70
0
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0
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500
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News:
Bioconductor Release 3.16 Code Freeze
release
Release
Bioconductor
13 months ago
shepherl
3.9k
0
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0
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681
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News:
Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release
db0
Annotation
14 months ago
kayla.interdonato
▴ 160
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1.2k
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News:
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presentation
BioC2023
Conference
community
Bioconductor
written 15 months ago by
Maria Doyle
▴ 70
0
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0
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572
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News:
Bioconductor 3.17 Release Schedule
Softwar
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release
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14 months ago
shepherl
3.9k
3
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6
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1.2k
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News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
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Devel
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updated 14 months ago by
darrelvanhoy
• 0 • written 14 months ago by
shepherl
3.9k
0
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0
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476
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News:
EuroBioC2023 abstract submission is open!
presentation
EuroBioC2023
Conference
community
Bioconductor
14 months ago
Maria Doyle
▴ 70
0
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0
replies
532
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News:
Course - R/BIOCONDUCTOR FOR MASS SPECTROMETRY AND PROTEOMICS
Proteomics
R
Bioconductor
MassSpectrometry
15 months ago
info
▴ 10
0
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0
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484
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News:
Bioconductor call for events!
Bioconductor
events
community
15 months ago
Maria Doyle
▴ 70
1
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0
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683
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News:
Ensembl 109 has been released
ensembldb
15 months ago
Aleena
▴ 30
1
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1
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727
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News:
Join the Community Advisory Board -- upcoming elections -- deadline Today
Bioconductor
CAB
bioconductoroversight
community
written 17 months ago by
shepherl
3.9k
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574
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News:
Seeking members for BioC2023 organizing committee
BioC2023
Bioconductor
community
16 months ago
Maria Doyle
▴ 70
0
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0
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559
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Seeking Outreachy interns and project proposals
Bioconductor
Outreachy
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16 months ago
Maria Doyle
▴ 70
1
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0
replies
520
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News:
Virtual talk “Model Misspecification in Microbiome Studies” by Amy D Willis
MicrobiomeData
Microbiome
17 months ago
Levi Waldron
★ 1.1k
3
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0
replies
1.0k
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News:
Save the Date Bioc2023!
Bioc2023
Conference
Bioconductor
18 months ago
shepherl
3.9k
0
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1
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749
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News:
Bioconductor Scientific or Informatic Technology Advancement Award!
Recognition
Awards
Bioc2022
Bioconductor
written 2.1 years ago by
shepherl
3.9k
1
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2
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792
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News:
Ensembl 108 has been released!
biomaRt
ensembldb
ensembl
written 19 months ago by
Louisse
▴ 10
1
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2
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1.3k
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News:
Registrations are now open for BioC Asia 2022
Asia
BioCAsia
Conferences
Events
News
20 months ago • updated 18 months ago
Peter Hickey
▴ 740
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2
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668
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News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia
BioCAsia
Conferences
Events
BioC
written 18 months ago by
Peter Hickey
▴ 740
1
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0
replies
814
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News:
Bioconductor 3.16 is Released!
Release
Packages
Bioconductor
Software
18 months ago
shepherl
3.9k
0
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0
replies
630
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News:
Bioconductor Carpentries instructor training
teaching
Carpentries
18 months ago
Maria Doyle
▴ 70
0
votes
0
replies
580
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
18 months ago
shepherl
3.9k
0
votes
2
replies
775
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
19 months ago
shepherl
3.9k
1
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1
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596
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News:
Bioconductor Hacktoberfest meetups!
meetup
hacktoberfest
19 months ago
Maria Doyle
▴ 70
0
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0
replies
600
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News:
Bioconductor Code of Conduct Committee Elections 2022
conduct
19 months ago
Laurent Gatto
1.6k
0
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0
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735
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News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
19 months ago
shepherl
3.9k
0
votes
0
replies
654
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News:
Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release
db0
annotation
20 months ago
kayla.interdonato
▴ 160
4
votes
0
replies
670
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
20 months ago
shepherl
3.9k
13
votes
3
replies
2.2k
views
News:
Bioconductor teaching week
teaching
Carpentries
written 21 months ago by
Laurent Gatto
1.6k
1
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0
replies
825
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News:
Ensembl 107 has been released
ensembldb
22 months ago
Aleena
▴ 30
0
votes
0
replies
708
views
News:
Introduction to genomic data analysis with R and Bioconductor in Heidelberg, 12-13 September 2022
Workshop
22 months ago
Laurent Gatto
1.6k
0
votes
0
replies
605
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News:
Translation Hackathon (community event) announcement
event
translation
community
22 months ago
kozo.nishida
• 0
1
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1
reply
1.1k
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News:
Nominations for Bioconductor 2022 Awards!
Bioc2022
Awards
Bioconductor
Recognition
written 2.2 years ago by
shepherl
3.9k
0
votes
0
replies
680
views
News:
Bioc2022 In-person attendance lottery deadline this Sunday
Registration
Bioc2022
Conference
2.0 years ago
shepherl
3.9k
0
votes
0
replies
660
views
News:
Nominations for Bioconductor Technical Advisory Board is open
Board
Organization
Bioc2022
Bioconductor
2.0 years ago
shepherl
3.9k
0
votes
0
replies
596
views
News:
Junior Developer or New Package Developer Award
Recognition
Awards
Bioc2022
Bioconductor
2.0 years ago
shepherl
3.9k
8
votes
0
replies
889
views
News:
Bioconductor 3.15 is Released!
Software
Release
Packages
Bioconductor
2.1 years ago • updated 2.0 years ago
shepherl
3.9k
0
votes
0
replies
521
views
News:
Search on bioconductor.org unavailable
Website
bioconductor.org
Bioconductor
2.0 years ago
shepherl
3.9k
0
votes
0
replies
482
views
News:
Bioc2022 Registration Now Open!
#conference
#bioc2022
2.1 years ago
shepherl
3.9k
0
votes
0
replies
622
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News:
Bioconductor Long-term Contribution Award
Recognition
Awards
Bioc2022
Bioconductor
2.1 years ago
shepherl
3.9k
495 results • Page
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Comment: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.1k
Hi, What do you get if you run the following `httr::HEAD()` command? I noticed that you have `libcurl` version 8.3.0 from `curl::curl_vers…
Comment: Slightly different count plots from R and spreadsheet
by
boczniak767
▴ 720
Thank you @mikelove for your patience and kind advice. So I assume the plots from R are valid. Best wishes.
Answer: Help with infinite recursion - non-zero exit status in installation of GenomeInf
by
James W. MacDonald
66k
Maybe just try again? ``` > install("GenomeInfoDbData", force = TRUE) 'getOption("repos")' replaces Bioconductor standard repositorie…
Comment: Help with infinite recursion - non-zero exit status in installation of GenomeInf
by
Brandon
• 0
Hello, As an update, I am able to install and load GenomeInfoDb successfully in a fresh renv in my WSL distro. However, I'm not sure what …
Comment: slingshot: error with plot3d.SlingshotDataSet
by
Kelly Street
• 0
This issue has been addressed [on GitHub][1]. [1]: https://github.com/kstreet13/slingshot/issues/249
Votes
Comment: recount3 problem downloading data from source sra
Answer: Slightly different count plots from R and spreadsheet
Including squared covariates to account for non-linear dependencies in differential gene expression analysis
DESeq2 DE gene expression of scRNA-seq pseudobulk
Answer: Multiple factor DSEq2 result generates weird volcano plot
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