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4
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408
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Installation problem of rtracklayer on Bioconductor version 3.19
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updated 12 weeks ago by 3.9k • written 12 weeks ago by • 0
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549
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what should be the input for SingleR() automatic cell type annotation?
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11 months ago Yijing • 0
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DEXSeq plot error
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No compilation on Windows y compilation on linux
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12 months ago • updated 11 months ago Franck RICHARD • 0
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10 months ago romain.lannes • 0
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Could SGSeq utilizes "ts" tag produced from minimap2 other than "XS" tag?
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11 weeks ago jk • 0
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17 days ago • updated 14 days ago Chris ▴ 10
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combat output NaN
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6 months ago maxixian1990 • 0
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Comparing the effects of a condition over time in two seperate tissues
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12 weeks ago Dillon • 0
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8 days ago neilzhao ▴ 30
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3 months ago sameerahmadguru • 0
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updated 10 months ago by ▴ 150 • written 10 months ago by ▴ 30
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updated 10 months ago by ▴ 210 • written 11 months ago by ▴ 10
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10 months ago Jiyuan • 0
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4 months ago WS • 0
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"Counts" in enrichGO
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updated 3 months ago by ▴ 10 • written 3 months ago by • 0
1
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425
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How do I select a subset of genes for functional enrichment(GO/KEGG) analysis from WGCNA results?
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4 months ago JalapenoCornbread • 0
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3
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determine if R package or it's dependencies functionality require internet access
biomaRt
updated 6 months ago by 50k • written 6 months ago by • 0
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0
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Can I plot values from LINCS level 4?
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11 months ago Alexandre • 0
1
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How to get Cytogenetic band for muscles gene by using Biomart or other tools in R
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10 weeks ago Henry • 0
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updated 5 months ago by ★ 4.0k • written 5 months ago by • 0
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11 weeks ago mperalc • 0
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9 months ago Mohamed ▴ 30
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5 weeks ago Stevie Pederson • 0
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updated 11 months ago by ▴ 730 • written 11 months ago by • 0
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6 months ago vasily.dobrovolsky • 0
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11 weeks ago Gordon • 0
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Conversion of .sf to .rgel format for the salmon processed files with transcript to gene mapping.
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updated 4 months ago by ★ 4.1k • written 4 months ago by • 0
401 results • Page 2 of 9
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Answer: Numerical differences in DESeq2 output depending on different design matrix cons by Michael Love 42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
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Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
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