Showing : ComplexHeatmap • reset
2
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3
replies
298
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ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with variable number of continuous columns
ComplexHeatmap
12 days ago • updated 11 days ago daniel.carbajo • 0
2
votes
2
replies
151
views
ComplexHeatmap: change the names of a HeatmapAnnotation object
ComplexHeatmap
15 days ago • updated 12 days ago daniel.carbajo • 0
2
votes
2
replies
304
views
ComplexHeatmap crashing R session
ComplexHeatmap
11 weeks ago Felipe • 0
2
votes
3
replies
966
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 15 months ago by ▴ 40 • written 15 months ago by ▴ 10
3
votes
4
replies
2.8k
views
ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap Complex
updated 15 months ago by ▴ 40 • written 15 months ago by • 0
2
votes
5
replies
1.5k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
16 months ago Katharina • 0
0
votes
1
reply
1.5k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 20 months ago by ▴ 260 • written 20 months ago by • 0
0
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0
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920
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Boxplot annotation per cluster and column using ComplexHeatmap
ComplexHeatmap
21 months ago gdeniz • 0
2
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2
replies
2.2k
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 8 months ago by • 0 • written 22 months ago by ▴ 10
3
votes
3
replies
3.0k
views
ComplexHeatmap install error
ComplexHeatmap
updated 22 months ago by 65k • written 22 months ago by ▴ 10
2
votes
3
replies
2.2k
views
Complexheatmap row-names not showing up
ComplexHeatmap
23 months ago • updated 22 months ago krushnach80 • 0
1
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1
reply
2.0k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap Anno Annotation
updated 2.6 years ago by ▴ 260 • written 2.7 years ago by ▴ 10
1
vote
0
replies
1.0k
views
ComplexHeatmap: Swapping between left_annotation and right_annotation results in a blank space
anno_block ComplexHeatmap left_annotation right_annotation
2.8 years ago glich • 0
2
votes
5
replies
3.3k
views
News: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr ATACSeq DiffBind ComplexHeatmap ChIPSeq
updated 16 months ago by • 0 • written 2.9 years ago by ★ 5.2k
3
votes
2
replies
2.0k
views
Complex Heatmap shows just one color
Heatmap ComplexHeatmap colorRamp
3.0 years ago Assa Yeroslaviz ★ 1.5k
0
votes
1
reply
2.1k
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
3.1 years ago vanbelj ▴ 30
2
votes
4
replies
5.9k
views
Complexheatmap Installation Issue
ComplexHeatmap
3.3 years ago legro.melanie • 0
0
votes
0
replies
639
views
How to show rownames in densityheatmaps
ComplexHeatmap
3.4 years ago adR ▴ 30
0
votes
2
replies
1.1k
views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap R
3.6 years ago pthom010 • 0
0
votes
2
replies
11k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 3.8 years ago by ▴ 260 • written 3.8 years ago by • 0
1
vote
6
replies
9.9k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r rnaseq complexHeatmap annotation
updated 3.9 years ago by ▴ 260 • written 3.9 years ago by ▴ 10
0
votes
1
reply
1.5k
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap UpSet
3.9 years ago moldach ▴ 20
3
votes
2
replies
2.1k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger complexheatmap R clustering
updated 4.0 years ago by 50k • written 4.0 years ago by • 0
0
votes
6
replies
4.6k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 4.6 years ago by ▴ 260 • written 4.6 years ago by ▴ 110
3
votes
7
replies
3.2k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 4.6 years ago by ▴ 260 • written 4.6 years ago by ▴ 10
3
votes
2
replies
6.8k
views
ComplexHeatmap removes row labels if annotation is added
annotation show_row_names complexheatmap
4.8 years ago • updated 4.7 years ago alexw858 • 0
0
votes
1
reply
810
views
ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
updated 5.0 years ago by ▴ 260 • written 5.0 years ago by ▴ 20
4
votes
3
replies
2.9k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap r
updated 5.0 years ago by ▴ 260 • written 5.0 years ago by ▴ 190
0
votes
1
reply
2.3k
views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap software error
updated 5.0 years ago by 65k • written 5.0 years ago by • 0
2
votes
1
reply
3.9k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 5.2 years ago by ▴ 260 • written 5.2 years ago by ▴ 40
0
votes
1
reply
1.2k
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
5.2 years ago Goku • 0
0
votes
2
replies
1.6k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 6.2 years ago by ▴ 200 • written 6.2 years ago by 65k
5
votes
12
replies
10k
views
Combining ComplexHeatmap with other plot types
complexheatmap ggplot2
updated 6.4 years ago by ▴ 260 • written 6.4 years ago by ▴ 10
1
vote
5
replies
8.8k
views
How to add both row and column labels to Complexheatmap
complexheatmap labels
6.6 years ago dilawerkh4 • 0
0
votes
0
replies
1.5k
views
Problem with heatmap by ComplexHeatmap
complexheatmap Rstudio NOISeq
6.6 years ago Luiz • 0
0
votes
1
reply
1.8k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
6.6 years ago Bogdan ▴ 670
3
votes
2
replies
4.3k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
6.6 years ago CodeAway ▴ 70
0
votes
0
replies
1.2k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 6.6 years ago by 50k • written 6.6 years ago by • 0
2
votes
3
replies
2.2k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap maftools
updated 6.7 years ago by ▴ 90 • written 6.7 years ago by ▴ 670
0
votes
2
replies
1.7k
views
Extracting subclusters from original data
complexheatmap metabolomics
updated 6.8 years ago by ▴ 130 • written 6.8 years ago by • 0
1
vote
2
replies
2.3k
views
legend with gradient in ComplexHeatmap
complexheatmap
6.8 years ago AR3513 • 0
2
votes
2
replies
1.3k
views
about reshaping a data frame
maftools complexheatmap
updated 6.8 years ago by ▴ 110 • written 6.8 years ago by ▴ 670
0
votes
1
reply
1.5k
views
Oncoprint function in ComplexHeatmap
complexheatmap
6.9 years ago Bogdan ▴ 670
0
votes
5
replies
2.0k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
7.0 years ago AR3513 • 0
0
votes
1
reply
1.1k
views
Error in Heatmap...
complexheatmap
7.1 years ago baranikumar22 • 0
8
votes
1
reply
9.2k
views
extracting the genes associated with the clusters
heatmap.2 pheatmap complexheatmap heatplus
updated 7.1 years ago by ▴ 680 • written 7.1 years ago by ▴ 670
0
votes
1
reply
1.1k
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 7.2 years ago by ★ 13k • written 7.2 years ago by ▴ 150
1
vote
2
replies
1.9k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap bug
7.3 years ago brt381 • 0
2
votes
1
reply
3.5k
views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap heatmap.2 dendrogram dendextend heatmap
updated 7.5 years ago by ▴ 200 • written 7.5 years ago by ▴ 660
0
votes
1
reply
1.5k
views
How to manage multiple legends in heatmap_legend_param (ComplexHeatmap) ?
ComplexHeatmap complexheatmap
7.6 years ago g.atla ▴ 10
50 results • Page 1 of 1
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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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