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Showing :
ComplexHeatmap
•
reset
3
votes
2
replies
18k
views
Plotting several heatmaps onto the same grid with the ComplexHeatmap package in R
complexheatmap
updated 7.6 years ago by
jokergoo
▴ 200 • written 7.6 years ago by
chriad
▴ 10
5
votes
2
replies
13k
views
Complex Heatmap - hide one legend, show 2 - out off three annotations
complexheatmap
bioconductor
annotation
heatmap
legend
8.0 years ago • updated 7.9 years ago
annkatrin.goepfert
▴ 10
0
votes
2
replies
11k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 3.9 years ago by
Zuguang Gu
▴ 260 • written 3.9 years ago by
AR3513
• 0
5
votes
12
replies
10k
views
Combining ComplexHeatmap with other plot types
complexheatmap
ggplot2
updated 6.5 years ago by
Zuguang Gu
▴ 260 • written 6.5 years ago by
my4
▴ 10
1
vote
6
replies
9.9k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r
rnaseq
complexHeatmap
annotation
updated 3.9 years ago by
Zuguang Gu
▴ 260 • written 3.9 years ago by
camillab.
▴ 10
4
votes
4
replies
9.3k
views
ComplexHeatmap Scale by Row
ComplexHeatmap
heatmap
updated 8.9 years ago by
James W. MacDonald
65k • written 8.9 years ago by
andrew.j.skelton73
▴ 370
8
votes
1
reply
9.2k
views
extracting the genes associated with the clusters
heatmap.2
pheatmap
complexheatmap
heatplus
updated 7.2 years ago by
Gavin Kelly
▴ 680 • written 7.2 years ago by
Bogdan
▴ 670
1
vote
5
replies
8.8k
views
How to add both row and column labels to Complexheatmap
complexheatmap
labels
6.6 years ago
dilawerkh4
• 0
3
votes
2
replies
6.8k
views
ComplexHeatmap removes row labels if annotation is added
annotation
show_row_names
complexheatmap
4.8 years ago
alexw858
• 0
3
votes
4
replies
6.4k
views
ComplexHeatmap - Annotation without a named vector
complexheatmap
updated 7.7 years ago by
jokergoo
▴ 200 • written 7.7 years ago by
andrew.j.skelton73
▴ 370
2
votes
4
replies
5.9k
views
Complexheatmap Installation Issue
ComplexHeatmap
3.3 years ago
legro.melanie
• 0
0
votes
6
replies
4.6k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 4.6 years ago by
Zuguang Gu
▴ 260 • written 4.6 years ago by
AB
▴ 110
3
votes
2
replies
4.3k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
6.7 years ago
CodeAway
▴ 70
5
votes
5
replies
4.1k
views
ComplexHeatmap - Heatmap function within a for loop
ComplexHeatmap
for loop
Heatmap function
updated 21 months ago by
krushnach80
• 0 • written 7.7 years ago by
An De Bondt
▴ 40
1
vote
4
replies
4.0k
views
complexHeatmap - distance calculation
complexheatmap
8.3 years ago
annkatrin.goepfert
▴ 10
2
votes
1
reply
3.9k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 5.2 years ago by
Zuguang Gu
▴ 260 • written 5.2 years ago by
Vinicius Henrique da Silva
▴ 40
2
votes
1
reply
3.5k
views
Assign custom dendrogram to ComplexHeatmap Heatmap object
complexheatmap
heatmap.2
dendrogram
dendextend
heatmap
updated 7.5 years ago by
jokergoo
▴ 200 • written 7.5 years ago by
enricoferrero
▴ 660
2
votes
5
replies
3.3k
views
News:
New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr
ATACSeq
DiffBind
ComplexHeatmap
ChIPSeq
updated 16 months ago by
Junsik
• 0 • written 2.9 years ago by
Rory Stark
★ 5.2k
3
votes
7
replies
3.2k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix
heatmap
ComplexHeatmap
missing values
R
updated 4.6 years ago by
Zuguang Gu
▴ 260 • written 4.6 years ago by
mohammedtoufiq91
▴ 10
3
votes
3
replies
3.1k
views
ComplexHeatmap install error
ComplexHeatmap
updated 22 months ago by
James W. MacDonald
65k • written 22 months ago by
nalaspina
▴ 10
4
votes
3
replies
2.9k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap
r
updated 5.0 years ago by
Zuguang Gu
▴ 260 • written 5.0 years ago by
Ram
▴ 200
3
votes
4
replies
2.9k
views
ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap
Complex
updated 15 months ago by
elefth.pavlos
▴ 40 • written 15 months ago by
Katharina
• 0
0
votes
1
reply
2.4k
views
Complexheatmap question on sorting columns
complexheatmap
8.0 years ago
tmcelrath
• 0
1
vote
2
replies
2.3k
views
legend with gradient in ComplexHeatmap
complexheatmap
6.8 years ago
AR3513
• 0
0
votes
1
reply
2.3k
views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap
software error
updated 5.0 years ago by
James W. MacDonald
65k • written 5.0 years ago by
jmKeith
• 0
2
votes
3
replies
2.2k
views
Complexheatmap row-names not showing up
ComplexHeatmap
23 months ago
krushnach80
• 0
2
votes
2
replies
2.2k
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 9 months ago by
franciscaelibethgalvez
• 0 • written 22 months ago by
nalaspina
▴ 10
2
votes
3
replies
2.2k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap
maftools
updated 6.7 years ago by
anand_mt
▴ 90 • written 6.7 years ago by
Bogdan
▴ 670
3
votes
2
replies
2.1k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger
complexheatmap
R
clustering
updated 4.0 years ago by
Gordon Smyth
50k • written 4.0 years ago by
eggrandio
• 0
0
votes
1
reply
2.1k
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
3.1 years ago
vanbelj
▴ 30
3
votes
2
replies
2.0k
views
Complex Heatmap shows just one color
Heatmap
ComplexHeatmap
colorRamp
3.0 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
5
replies
2.0k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
7.0 years ago
AR3513
• 0
1
vote
1
reply
2.0k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap
Anno
Annotation
updated 2.7 years ago by
Zuguang Gu
▴ 260 • written 2.7 years ago by
Ashish Jain
▴ 10
1
vote
2
replies
1.9k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap
bug
7.3 years ago
brt381
• 0
0
votes
1
reply
1.9k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
6.6 years ago
Bogdan
▴ 670
0
votes
2
replies
1.7k
views
Extracting subclusters from original data
complexheatmap
metabolomics
updated 6.8 years ago by
sina.nassiri
▴ 130 • written 6.8 years ago by
Mina
• 0
0
votes
2
replies
1.6k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 6.2 years ago by
jokergoo
▴ 200 • written 6.2 years ago by
James W. MacDonald
65k
0
votes
0
replies
1.6k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
6.6 years ago
Luiz
• 0
2
votes
5
replies
1.6k
views
ComplexHeatmap - z-score color coding failed
heatmaps
ComplexHeatmap
16 months ago
Katharina
• 0
0
votes
1
reply
1.5k
views
How to manage multiple legends in heatmap_legend_param (ComplexHeatmap) ?
ComplexHeatmap
complexheatmap
7.6 years ago
g.atla
▴ 10
0
votes
1
reply
1.5k
views
Oncoprint function in ComplexHeatmap
complexheatmap
6.9 years ago
Bogdan
▴ 670
0
votes
1
reply
1.5k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R
heatmaps
ComplexHeatmap
Heatma
updated 20 months ago by
Zuguang Gu
▴ 260 • written 20 months ago by
תום
• 0
0
votes
1
reply
1.5k
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap
UpSet
3.9 years ago
moldach
▴ 20
2
votes
2
replies
1.4k
views
about reshaping a data frame
maftools
complexheatmap
updated 6.8 years ago by
Haiying.Kong
▴ 110 • written 6.8 years ago by
Bogdan
▴ 670
0
votes
1
reply
1.2k
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
5.2 years ago
Goku
• 0
0
votes
1
reply
1.2k
views
Annotated heatmap limits
complexheatmap
updated 8.5 years ago by
Steve Lianoglou
★ 13k • written 8.5 years ago by
michael.ridley6
• 0
0
votes
0
replies
1.2k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 6.7 years ago by
Gordon Smyth
50k • written 6.7 years ago by
johnnytam100
• 0
0
votes
1
reply
1.1k
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 7.2 years ago by
Steve Lianoglou
★ 13k • written 7.2 years ago by
d r
▴ 150
0
votes
2
replies
1.1k
views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap
R
3.6 years ago
pthom010
• 0
0
votes
1
reply
1.1k
views
ComplexHeatmap Legend labels
complexheatmap
7.7 years ago
vedran.franke
• 0
50 results • Page
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Replies
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
numbers 1 to 3 represent observations and/or replicates Control is control. The three controls are shown as Control_1, control_2 and Contr…
Answer: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
The time and treatment are essentially the same thing, so you cannot have both in the model at the same time. Do the numbers 1:3 represent …
Answer: DESeq2 v1.35.0
by
Michael Love
41k
That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i
by
James W. MacDonald
65k
Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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