Showing : Genetics • reset
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247
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accesing gene name RNAseq
genetics GeneticsPed Genetics
5 months ago Gülsüm • 0
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0
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353
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Job: Bioinformatics Research Associate, Genomics and Genetics
genomes Genetics
5 months ago JP Carter ▴ 40
0
votes
3
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658
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Multiple Testing When Using Multiple Contrasts/Comparisons in DESEQ2
MultipleComparison DESeq2 Genetics contrasts RNASeq
updated 9 months ago by 65k • written 9 months ago by • 0
3
votes
5
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927
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calculate distance to a certain sequence in one gene
SummarizedExperiment Genetics
updated 12 months ago by 65k • written 12 months ago by • 0
0
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0
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881
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Job: Postdoctoral research scientist in computational biology/statistical genetics/functional genomics at Columbia University, USA
Alzheimer's StatisticalMethod Genetics molecularQTL FunctionalGenomics
19 months ago gaow • 0
0
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0
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894
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Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
3.3 years ago António Miguel de Jesus Domingues ▴ 510
0
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0
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1.1k
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Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
3.5 years ago Vincent J. Carey, Jr. 6.7k
2
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0
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1.2k
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Job: developer/project management position at Harvard Medical School
softwaredevelopment Job job cloudcomputing genetics
3.6 years ago • updated 3.2 years ago Vincent J. Carey, Jr. 6.7k
4
votes
6
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1.2k
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Extremely big genes in annotation TxDb packages
annotation txdb AnnotationData Genetics
updated 3.8 years ago by 65k • written 3.8 years ago by ▴ 10
0
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1
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1.2k
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DiffBind - Counting reads - counts not found
diffbind differential analysis genetics #chip-seq
updated 5.1 years ago by ★ 5.2k • written 5.2 years ago by • 0
0
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0
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929
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Job: Computational Biology / Genomics Internship at Denali Therapeutics
internship genomics genetics Job
5.2 years ago Steve Lianoglou ★ 13k
0
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0
replies
761
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package for mismatch distribution?
genetics statistics
5.3 years ago myriam.croze07 • 0
1
vote
0
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1.1k
views
Job: 2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics genetics machine learning Job
5.5 years ago gagneur ▴ 10
0
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1
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1.1k
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Normalization and Quality Control for Multiple scRNAseq Data Sets
normalization rnaseq genetics batch effect dropout
updated 5.6 years ago by ★ 13k • written 5.6 years ago by • 0
0
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0
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1.9k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
5.8 years ago • updated 3.4 years ago Luo Weijun ★ 1.6k
0
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1
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1.6k
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Get Gene IDs for a list of Gene Names in R
r bioinformatics org.Hs.eg.db genetics
updated 5.9 years ago by 25k • written 5.9 years ago by • 0
1
vote
1
reply
960
views
co-evolution analysis for RNA
genetics
5.9 years ago tg369 ▴ 40
2
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0
replies
1.2k
views
Job: Statistical Geneticist at Denali Therapeutics, South San Francisco, CA, USA
job genetics drug development neurodegeneration Job
6.0 years ago sandmann.t ▴ 70
0
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0
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1.2k
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics job biostatistics genomics bioinformatics Job
6.1 years ago xzhousph • 0
1
vote
3
replies
2.1k
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Gene ID Duplicates
deseq2 genetics Tutorial
updated 6.1 years ago by 65k • written 6.1 years ago by • 0
0
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0
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1.4k
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fisher exact test pairwise associations between gene mutations
genetics
6.7 years ago wasmetqall • 0
0
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0
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1.6k
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Job: Research Co-ordinator (Full Time)
genetics obesity molecular biology biomedical science Job
6.8 years ago njc65 • 0
0
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0
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1.2k
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Job: Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
biostatistics genetics Job
7.0 years ago hong.lee • 0
0
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0
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1.5k
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Job: Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics job genomics postdoc obesity Job
7.2 years ago njc65 • 0
0
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0
replies
1.5k
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Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
7.2 years ago • updated 7.1 years ago Luo Weijun ★ 1.6k
0
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1
reply
1.2k
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Extension to GoogleGenomics: getVariantCalls
GoogleGenomics genetics variants
7.3 years ago Vincent J. Carey, Jr. 6.7k
0
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0
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1.7k
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Job: Postdoc / Computational Biologist for circulating tumor DNA/RNA profiling at Memorial Sloan Kettering Cancer Center MSKCC, New York
cancer sequencing genetics genomes diagnostic Job
7.7 years ago dtlabmskcc • 0
0
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0
replies
953
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What statistical test is appropriate? 2 categorical independent variables, 3 categorical dependent variables, biological replicates
genetics
7.7 years ago efoss ▴ 10
0
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0
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1.1k
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homologue gene conversion worm to human
biomaRt homologue annotation genetics
7.7 years ago Nemo ▴ 80
0
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0
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976
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Genetic Association analysis using four siblings among which three were affected and one was normal
genetics plink linkage disequilibrium
7.8 years ago li lilingdu ▴ 450
2
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0
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1.4k
views
Job: Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job GWAS genetics genomics neuro Job
7.9 years ago enridomenici ▴ 10
1
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1
reply
1.5k
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Question about EAGenes (TCGAbiolinks)
annotation cancer biomart genetics R
updated 8.1 years ago by ▴ 260 • written 8.1 years ago by • 0
0
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0
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1.6k
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Job: Calling all Clinical Genomic Scientist
computational biology genomics genetics Python java Job
8.9 years ago careers • 0
0
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0
replies
1.5k
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Job: Come apply for our Epidemiologist, AncestryHealth role
genomics genetics design statistics scientist Job
8.9 years ago careers • 0
2
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0
replies
1.9k
views
Job: 23andMe Job Opportunities
bioinformatician job bioinformatics scientist genetics Job
9.0 years ago rgentleman ★ 5.5k
1
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0
replies
2.0k
views
Job: Bioinformatics / Biostatistics in genetic interaction analysis
high-throughput screening interactions genetics jobs image analysis Job
9.0 years ago Bernd Fischer ▴ 550
3
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5
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2.3k
views
How to Find Common Dysregulated Genes in Two or More Sets of Microarray Data?
disease genetics micro array data microarray
updated 9.1 years ago by 50k • written 9.1 years ago by ▴ 20
0
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0
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2.1k
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Job: Abbvie -- Senior Manager/Associate Director, Exploratory Statistics
genomics genetics proteomics rnaseq microarray Job
9.2 years ago Feng Hong • 0
0
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3
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2.0k
views
Error running makeTranscriptDbFromGFF in GenomicFeatures
Genetics TranscriptDb GenomicFeatures
updated 9.7 years ago by ★ 11k • written 9.7 years ago by ▴ 250
0
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0
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2.2k
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Plot exon number per gene and transcript lengths
Genetics TranscriptDb GenomicFeatures
9.7 years ago Jon Bråte ▴ 250
2
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0
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2.2k
views
Job: Job Opening: Computational Biologist @ Genentech Bioinformatics
Job Sequencing Genetics Cancer
updated 9.6 years ago by ★ 8.2k • written 9.7 years ago by ★ 11k
1
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1
reply
1.6k
views
Question about decideTestsDGE()
Genetics edgeR
updated 9.6 years ago by 50k • written 9.8 years ago by ▴ 250
0
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8
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2.8k
views
Expected number of DE genes?
Genetics edgeR DESeq2 Genetics edgeR DESeq2
updated 9.8 years ago by ▴ 750 • written 9.8 years ago by ▴ 140
0
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1
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3.8k
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DESeq2 - factor base level changes the DE genes.
RNASeq Genetics DESeq2 RNASeq Genetics DESeq2
updated 9.5 years ago by 41k • written 9.8 years ago by ★ 13k
0
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2
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1.3k
views
Can my problem be addressed with Bioconductor?
Genetics GOstats SNPchip topGO Genetics GOstats SNPchip topGO
updated 9.9 years ago by 65k • written 9.9 years ago by ★ 13k
0
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2
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2.0k
views
UCSC data anomaly in 50638 transcript(s): the cds cumulative length is
Genetics GO Regression Cancer TranscriptDb Genetics GO Regression Cancer TranscriptDb
updated 9.9 years ago by ▴ 570 • written 9.9 years ago by 16k
0
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1
reply
1.7k
views
limma: percent of variance explained
Genetics limma Genetics limma
updated 10.0 years ago by 50k • written 10.0 years ago by ▴ 90
1
vote
12
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3.3k
views
Problem running summarizeOverlaps()
Genetics Genetics
updated 8.2 years ago by ▴ 10 • written 10.0 years ago by ▴ 140
0
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2
replies
1.3k
views
RNA-seq pathway analysis in Canis familiaris
RNASeq Genetics Annotation Canis familiaris gage RNASeq Genetics Annotation gage
updated 10.0 years ago by 65k • written 10.0 years ago by ▴ 140
0
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0
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1.5k
views
easyRNASeq: Number of total counts
GeneExpression RNASeq Genetics Coverage Normalization BSgenome Biobase Biostrings biomaRt
10.1 years ago Guest User ★ 13k
50 results • Page 1 of 1
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Answer: More regions in union when increasing DBA$config$mergeOverlap by Rory Stark ★ 5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds) by Michael Love 41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds) by HAK • 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call by ATpoint ★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM() by James W. MacDonald 65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
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Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
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