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7
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News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
10 weeks ago • updated 20 days ago shepherl 3.9k
1
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8
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1.5k
views
News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.1 years ago by 3.9k
0
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8
replies
2.2k
views
How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation software software error
updated 7.9 years ago by ★ 4.3k • written 8.0 years ago by ▴ 10
0
votes
3
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1.0k
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.0 years ago by ▴ 160 • written 4.1 years ago by 3.9k
0
votes
5
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1.3k
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News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
2.6 years ago • updated 2.1 years ago shepherl 3.9k
1
vote
2
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1.4k
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News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
3.6 years ago shepherl 3.9k
0
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2
replies
1.6k
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
4.6 years ago • updated 4.5 years ago shepherl 3.9k
2
votes
2
replies
1.5k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
3.4 years ago • updated 3.0 years ago shepherl 3.9k
2
votes
3
replies
2.8k
views
package for sex determination using sam/bam files
software sex package
8.6 years ago Pau Marc Muñoz Torres ▴ 20
2
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4
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1.2k
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Bioconductor package development
package R software development
updated 3.6 years ago by 25k • written 3.6 years ago by • 0
0
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1
reply
289
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News: Bioconductor 3.19 Release Schedule
Release release Software
10 weeks ago • updated 7 weeks ago shepherl 3.9k
1
vote
3
replies
1.6k
views
Are there any bioconductor github mirrors for data packages?
software bioc-devel developers R
updated 8.5 years ago by ★ 8.2k • written 8.5 years ago by • 0
3
votes
6
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1.2k
views
News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 13 months ago by • 0 • written 14 months ago by 3.9k
2
votes
1
reply
1.0k
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Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 7 months ago by ★ 4.1k • written 8 months ago by ▴ 10
1
vote
1
reply
1.1k
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How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 4.4 years ago by ▴ 10 • written 4.4 years ago by ▴ 40
0
votes
1
reply
1.0k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
4.8 years ago • updated 4.7 years ago shepherl 3.9k
0
votes
2
replies
823
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 4.0 years ago by 65k • written 4.0 years ago by • 0
0
votes
1
reply
1.1k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.3 years ago by 65k • written 5.3 years ago by • 0
0
votes
2
replies
806
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What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 3.7 years ago by 3.9k • written 3.8 years ago by • 0
5
votes
1
reply
451
views
News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 6 months ago by 3.9k
0
votes
1
reply
874
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News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.0 years ago shepherl 3.9k
0
votes
1
reply
418
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Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 11 months ago by 65k • written 11 months ago by • 0
0
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1
reply
863
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.4 years ago shepherl 3.9k
0
votes
0
replies
732
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
19 months ago shepherl 3.9k
8
votes
0
replies
872
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News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
2.0 years ago shepherl 3.9k
0
votes
0
replies
564
views
News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
14 months ago shepherl 3.9k
0
votes
0
replies
789
views
Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
17 months ago Robert Castelo ★ 3.3k
0
votes
0
replies
436
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News: Bioconductor 3.18 Release Schedule
Release Software release
8 months ago shepherl 3.9k
1
vote
0
replies
800
views
News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
18 months ago shepherl 3.9k
0
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0
replies
1.5k
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News: The NIH Software Discovery Index | We invite your comments
software NIH index News
9.6 years ago Sean Davis 21k
4
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0
replies
121
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
12 days ago shepherl 3.9k
0
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0
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1.9k
views
Job: Harvard Medical School: Jr. Software Engineer/Biomedical Informatician
software engineer bioinformatician job Job
9.5 years ago Doe, Aimee ▴ 40
0
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0
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1.1k
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News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.1 years ago shepherl 3.9k
0
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1
reply
1.1k
views
News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
5.4 years ago shepherl 3.9k
0
votes
1
reply
1.2k
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News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
5.2 years ago shepherl 3.9k
0
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3
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1.1k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.9 years ago shepherl 3.9k
0
votes
0
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752
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
4.9 years ago jmaanaki • 0
0
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0
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857
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.7 years ago • updated 4.6 years ago shepherl 3.9k
2
votes
0
replies
2.3k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
4.6 years ago Laurent Gatto 1.6k
6
votes
0
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862
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News: Bioconductor 3.10 is released!!
release software packages bioconductor News
4.5 years ago shepherl 3.9k
2
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2
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1.0k
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News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
4.5 years ago shepherl 3.9k
0
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0
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888
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.5 years ago shepherl 3.9k
0
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0
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792
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.2 years ago shepherl 3.9k
4
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0
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820
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.0 years ago shepherl 3.9k
0
votes
0
replies
834
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News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
3.9 years ago shepherl 3.9k
3
votes
0
replies
1.4k
views
News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
3.7 years ago • updated 3.6 years ago shepherl 3.9k
0
votes
0
replies
1.1k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
3.6 years ago Vincent J. Carey, Jr. 6.7k
4
votes
0
replies
949
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News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
3.5 years ago shepherl 3.9k
0
votes
0
replies
601
views
News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
12 months ago shepherl 3.9k
8
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0
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900
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News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
2.5 years ago shepherl 3.9k
50 results • Page 1 of 1
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Comment: Problem finding certain variables when importing a public database GSE73103 by Yveto • 0
Thanks for your response.
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by Michael Love 42k
try `traceback()` that may help the developer figure out what's going on. Or you can make a reproducible example, with `makeExampleDESeqD…
Answer: normalization across different species for DESeq2 analysis by Michael Love 42k
There are many posts on this topic, in addition to that one: https://www.google.com/search?q=site%3Asupport.bioconductor.org+DESeq2+acro…
Comment: How to approach time course RNAseq data? Seeing 80% DE genes in timepoint groups by Ashley • 0
Hi Gordon, thank you for replying! I've updated the original post to include code.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k
To me, 100 and 200 kb both look fine. You want to have blocks smaller than segmentation regions.
Votes
Ensembl 112 has been released.
A: Diffbind results - non uniform width
A: Different logFC (log2foldchange) values for genes from limma-voom and other too
Answer: Error EPICv2 ChAMP
Comment: Store output of matchPWM()
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