Showing : flowWorkspace • reset
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Job: Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace CytoGLMM FlowSOM
6 months ago hbolouri • 0
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1
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204
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Getting a dataset that only contains the flow data within the gated area
flowWorkspace
updated 8 months ago by ★ 1.3k • written 8 months ago by • 0
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1
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389
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how to get MFI stats from data
flowCore flowStats flowUtils flowWorkspace
updated 8 months ago by ★ 1.3k • written 12 months ago by • 0
5
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4
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460
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ggcyto wrong axis scale?
ggcyto flowWorkspace flow cytometry flowjo
updated 24 months ago by 3.5k • written 24 months ago by ▴ 10
4
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5
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439
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Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace flowCore openCyto flowFrame F-measure
updated 2.1 years ago by ▴ 280 • written 2.1 years ago by • 0
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1
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1.6k
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uploading xml file in flowworkspace
flowworkspace xml R flowjo
updated 2.5 years ago by • 0 • written 5.2 years ago by ▴ 10
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3
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464
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Problem parsing data with parseWorkspace
flowWorkspace
2.6 years ago jokup101 • 0
3
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2
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435
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flowWorkspace cannot load external data
flowWorkspace external data flowCore
2.8 years ago Brent.OCarrigan • 0
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3
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548
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Cannot inverse transform GatingSet
flowworkspace flow cytometry flow workspace
updated 3.0 years ago by ▴ 280 • written 3.0 years ago by • 0
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1
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432
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How to get popStats from wsp
flowworkspace
updated 3.4 years ago by ★ 1.3k • written 3.4 years ago by ▴ 10
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3
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759
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FlowJo workspace cannot be parsed with flowworkspace
flowworkspace parseWorkspace parseWorkspace
updated 3.7 years ago by ★ 1.3k • written 3.7 years ago by ▴ 10
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4
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871
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Trying to plot MFI using Flowworkspace but parameters are transformed by 'flowjo_biexp'. How do I get untransformed values?
flowworkspace
updated 4.0 years ago by ★ 1.3k • written 4.0 years ago by • 0
1
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3
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805
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Unable to install flowWorkspace from github
flowWorkspace cytoutils
updated 4.2 years ago by 25k • written 4.2 years ago by ▴ 30
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5
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1.2k
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How to find Geometric Mean from gated Quantibeads
flowworkspace opencyto
updated 4.8 years ago by ★ 1.3k • written 4.8 years ago by ▴ 10
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1
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439
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How to adjust plotGate axis?
flowworkspace
4.9 years ago justinyi10 ▴ 10
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5
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813
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getIndices identifies non existing cells in a gate
flowworkspace getIndices
updated 5.3 years ago by ★ 1.3k • written 5.3 years ago by • 0
2
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5
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1.3k
views
Workflow highthroughputassays can't install properly
workflows flowcore flowstats flowworkspace
5.3 years ago kristoffer.haurum • 0
3
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0
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1.3k
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An appeal to flow cytometry tools users
flow flowcore flowworkspace cytometry gating
5.3 years ago Greg Finak ▴ 240
0
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1
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648
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exporting bi-exponetially transformed data as CVS
flowWorkspace flowcore
updated 5.3 years ago by ★ 1.3k • written 5.3 years ago by ▴ 10
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4
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758
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Parsing flowWorkspace data
opencyto R flowworkspace bioconductor
updated 5.4 years ago by ★ 1.3k • written 5.5 years ago by • 0
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1.4k
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reading an ".xml" file as FlowJo Workspace file
opencyto gating opencyto flowcore flowworkspace
updated 6.0 years ago by ★ 1.3k • written 6.0 years ago by • 0
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2
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1.8k
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OpenCyto -- proper gating of CD45
opencyto gating flowworkspace
updated 6.1 years ago by ★ 1.3k • written 6.1 years ago by ▴ 30
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2
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799
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on extend_val parameter in parseWorkspace
flowworkspace
updated 6.1 years ago by ★ 1.3k • written 6.1 years ago by ▴ 10
2
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1
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1.2k
views
Trouble parsing a workspace in flowWorkspace
flowworkspace opencyto
updated 6.1 years ago by ▴ 10 • written 6.1 years ago by ▴ 10
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1
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1.2k
views
FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
6.2 years ago Jiang, Mike ★ 1.3k
1
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9
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2.1k
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Problem with ggcyto/flowWorkspace from GitHub
software error flowworkspace opencyto
6.4 years ago anders.tondell ▴ 30
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6
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1.1k
views
flowWorkspace: Crash when using getPopStats with format="wide"
flowworkspace
6.4 years ago Viktor Thiel • 0
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2
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850
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Exporting to FlowJo
flowworkspace
6.5 years ago hunjoong.lee • 0
1
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2
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741
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flowWorkspace doesn't allow channels that are named as subset (edit: substring) of other (PE-A and PE-Alexa Fluor 700-A eg.)
flowWorkspace
updated 6.5 years ago by ★ 1.3k • written 6.5 years ago by ▴ 10
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1
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1.0k
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Understanding Flow cytometry data
flow cytometry flowcore flowclean rflowcyt flowworkspace
updated 6.5 years ago by ★ 1.3k • written 6.5 years ago by • 0
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2
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Problem updating flowWorkspace -- error: unrecognized command line option "-ftemplate-depth=900"
flowWorkspace
updated 6.5 years ago by ★ 1.3k • written 6.5 years ago by • 0
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3
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876
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Displaying Negative data from flow cytometers
flowcore flowworkspace flowviz
updated 6.6 years ago by ★ 1.3k • written 6.6 years ago by • 0
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0
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982
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flowWorkspace and ggcyto
flowworkspace flow cytometry visualization
6.8 years ago Jiang, Mike ★ 1.3k
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0
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952
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On boolean combinations (flowWorkspace)
flowworkspace flow cytometry
7.0 years ago Jiang, Mike ★ 1.3k
2
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5
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1.0k
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Memory problem using openWorkspace()
flowworkspace
7.6 years ago Silke Zachariae ▴ 30
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1
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961
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flowWorkspace transformation on FCS 3 data (Nikolas)
PROcess flowWorkspace PROcess flowWorkspace
updated 10.1 years ago by ▴ 30 • written 10.1 years ago by ▴ 240
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931
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flowWorkspace transformation on FCS 3 data
PROcess flowWorkspace PROcess flowWorkspace
10.1 years ago Nikolas ▴ 30
37 results • Page 1 of 1
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It is obvious that you haven't exported and read the correct intensity data, as you admit yourself in your question. I don't know what the …
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DiffBind https://bioconductor.org/packages/release/bioc/html/DiffBind.html
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Did you see the part of the vignette where we talk about this? https://bioconductor.org/packages/release/bioc/vignettes/fishpond/inst/doc/…
Comment: Transcript-level differential expression using DESeq2 by Ekta • 0
Hi Michael, thanks for your reply. One more question. If the qvalue (and pvalue) for all DTEs are the same, the Volcano plot will look lik…
Comment: R: problem with running time-series analysis software: Mfuzz by soda ▴ 80
I have solved this problem by myself. My data.frame is not suitable for Mfuzz.
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