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genetics
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0
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260
views
accesing gene name RNAseq
genetics
GeneticsPed
Genetics
6 months ago
Gülsüm
• 0
0
votes
0
replies
377
views
Job:
Bioinformatics Research Associate, Genomics and Genetics
genomes
Genetics
6 months ago
JP Carter
▴ 40
0
votes
3
replies
689
views
Multiple Testing When Using Multiple Contrasts/Comparisons in DESEQ2
MultipleComparison
DESeq2
Genetics
contrasts
RNASeq
updated 10 months ago by
James W. MacDonald
65k • written 10 months ago by
a26fd14e
• 0
3
votes
5
replies
947
views
calculate distance to a certain sequence in one gene
SummarizedExperiment
Genetics
updated 13 months ago by
James W. MacDonald
65k • written 13 months ago by
Marcus
• 0
0
votes
0
replies
904
views
Job:
Postdoctoral research scientist in computational biology/statistical genetics/functional genomics at Columbia University, USA
Alzheimer's
StatisticalMethod
Genetics
molecularQTL
FunctionalGenomics
20 months ago
gaow
• 0
0
votes
0
replies
917
views
Job:
Scientist/Senior Scientist, Statistical Geneticist
Sequencing
Genetics
GeneticsPed
statistics
3.4 years ago
António Miguel de Jesus Domingues
▴ 510
0
votes
0
replies
1.1k
views
Job:
R programmer position in genetic epidemiology/bioconductor
genetics
genomics
software
Job
3.6 years ago
Vincent J. Carey, Jr.
6.7k
2
votes
0
replies
1.3k
views
Job:
developer/project management position at Harvard Medical School
softwaredevelopment
Job
job
cloudcomputing
genetics
3.7 years ago • updated 3.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.9k
views
Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
genomics
NGS
R
genetics
statistics
5.9 years ago • updated 3.5 years ago
Luo Weijun
★ 1.6k
4
votes
6
replies
1.2k
views
Extremely big genes in annotation TxDb packages
annotation
txdb
AnnotationData
Genetics
updated 3.9 years ago by
James W. MacDonald
65k • written 3.9 years ago by
epibio
▴ 10
0
votes
1
reply
1.2k
views
DiffBind - Counting reads - counts not found
diffbind
differential analysis
genetics
#chip-seq
updated 5.2 years ago by
Rory Stark
★ 5.2k • written 5.2 years ago by
ryclb22
• 0
0
votes
0
replies
938
views
Job:
Computational Biology / Genomics Internship at Denali Therapeutics
internship
genomics
genetics
Job
5.2 years ago
Steve Lianoglou
★ 13k
0
votes
0
replies
775
views
package for mismatch distribution?
genetics
statistics
5.3 years ago
myriam.croze07
• 0
1
vote
0
replies
1.1k
views
Job:
2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics
genetics
machine learning
Job
5.6 years ago
gagneur
▴ 10
0
votes
1
reply
1.1k
views
Normalization and Quality Control for Multiple scRNAseq Data Sets
normalization
rnaseq
genetics
batch effect
dropout
updated 5.6 years ago by
Steve Lianoglou
★ 13k • written 5.6 years ago by
lmm278
• 0
0
votes
1
reply
1.6k
views
Get Gene IDs for a list of Gene Names in R
r
bioinformatics
org.Hs.eg.db
genetics
updated 5.9 years ago by
Martin Morgan
25k • written 5.9 years ago by
Bayram Sarilmaz
• 0
1
vote
1
reply
979
views
co-evolution analysis for RNA
genetics
6.0 years ago
tg369
▴ 40
2
votes
0
replies
1.2k
views
Job:
Statistical Geneticist at Denali Therapeutics, South San Francisco, CA, USA
job
genetics
drug development
neurodegeneration
Job
6.0 years ago
sandmann.t
▴ 70
0
votes
0
replies
1.2k
views
Job:
Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics
job
biostatistics
genomics
bioinformatics
Job
6.1 years ago
xzhousph
• 0
1
vote
3
replies
2.1k
views
Gene ID Duplicates
deseq2
genetics
Tutorial
updated 6.1 years ago by
James W. MacDonald
65k • written 6.1 years ago by
anokhi1997
• 0
0
votes
4
replies
13k
views
Normalization by DEseq
Genetics
Normalization
DESeq
Genetics
Normalization
DESeq
updated 6.2 years ago by
diannedai
• 0 • written 13.6 years ago by
Rui Luo
▴ 20
0
votes
0
replies
1.4k
views
fisher exact test pairwise associations between gene mutations
genetics
6.7 years ago
wasmetqall
• 0
0
votes
0
replies
1.6k
views
Job:
Research Co-ordinator (Full Time)
genetics
obesity
molecular biology
biomedical science
Job
6.8 years ago
njc65
• 0
0
votes
0
replies
1.2k
views
Job:
Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
biostatistics
genetics
Job
7.0 years ago
hong.lee
• 0
0
votes
0
replies
1.6k
views
Job:
Research Scientist in Biostatistics/Bioinformatics
statistics
genetics
genomics
R
Job
7.3 years ago • updated 7.1 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.5k
views
Job:
Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics
job
genomics
postdoc
obesity
Job
7.2 years ago
njc65
• 0
0
votes
1
reply
1.2k
views
Extension to GoogleGenomics: getVariantCalls
GoogleGenomics
genetics
variants
7.3 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.7k
views
Job:
Postdoc / Computational Biologist for circulating tumor DNA/RNA profiling at Memorial Sloan Kettering Cancer Center MSKCC, New York
cancer
sequencing
genetics
genomes
diagnostic
Job
7.7 years ago
dtlabmskcc
• 0
0
votes
0
replies
962
views
What statistical test is appropriate? 2 categorical independent variables, 3 categorical dependent variables, biological replicates
genetics
7.8 years ago
efoss
▴ 10
0
votes
0
replies
1.1k
views
homologue gene conversion worm to human
biomaRt
homologue
annotation
genetics
7.8 years ago
Nemo
▴ 80
0
votes
0
replies
990
views
Genetic Association analysis using four siblings among which three were affected and one was normal
genetics
plink
linkage disequilibrium
7.9 years ago
li lilingdu
▴ 450
2
votes
0
replies
1.4k
views
Job:
Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job
GWAS
genetics
genomics
neuro
Job
7.9 years ago
enridomenici
▴ 10
1
vote
1
reply
1.5k
views
Question about EAGenes (TCGAbiolinks)
annotation
cancer
biomart
genetics
R
updated 8.2 years ago by
Tiago Chedraoui Silva
▴ 260 • written 8.2 years ago by
pathkim
• 0
1
vote
12
replies
3.4k
views
Problem running summarizeOverlaps()
Genetics
Genetics
updated 8.3 years ago by
shania90.lk
▴ 10 • written 10.0 years ago by
Jessica Perry Hekman
▴ 140
0
votes
0
replies
1.6k
views
Job:
Calling all Clinical Genomic Scientist
computational biology
genomics
genetics
Python
java
Job
8.9 years ago
careers
• 0
0
votes
0
replies
1.5k
views
Job:
Come apply for our Epidemiologist, AncestryHealth role
genomics
genetics
design
statistics
scientist
Job
8.9 years ago
careers
• 0
2
votes
0
replies
2.0k
views
Job:
23andMe Job Opportunities
bioinformatician job
bioinformatics scientist
genetics
Job
9.0 years ago
rgentleman
★ 5.5k
1
vote
0
replies
2.0k
views
Job:
Bioinformatics / Biostatistics in genetic interaction analysis
high-throughput screening
interactions
genetics
jobs
image analysis
Job
9.1 years ago
Bernd Fischer
▴ 550
3
votes
5
replies
2.3k
views
How to Find Common Dysregulated Genes in Two or More Sets of Microarray Data?
disease
genetics
micro array data
microarray
updated 9.1 years ago by
Gordon Smyth
50k • written 9.1 years ago by
pankajnarula84
▴ 20
0
votes
0
replies
2.1k
views
Job:
Abbvie -- Senior Manager/Associate Director, Exploratory Statistics
genomics
genetics
proteomics
rnaseq
microarray
Job
9.2 years ago
Feng Hong
• 0
0
votes
1
reply
3.8k
views
DESeq2 - factor base level changes the DE genes.
RNASeq
Genetics
DESeq2
RNASeq
Genetics
DESeq2
updated 9.6 years ago by
Michael Love
42k • written 9.9 years ago by
Guest User
★ 13k
1
vote
1
reply
1.6k
views
Question about decideTestsDGE()
Genetics
edgeR
updated 9.6 years ago by
Gordon Smyth
50k • written 9.8 years ago by
Jon Bråte
▴ 250
2
votes
0
replies
2.2k
views
Job:
Job Opening: Computational Biologist @ Genentech Bioinformatics
Job
Sequencing
Genetics
Cancer
updated 9.7 years ago by
Dan Tenenbaum
★ 8.2k • written 9.7 years ago by
Michael Lawrence
★ 11k
0
votes
3
replies
2.1k
views
Error running makeTranscriptDbFromGFF in GenomicFeatures
Genetics
TranscriptDb
GenomicFeatures
updated 9.7 years ago by
Michael Lawrence
★ 11k • written 9.7 years ago by
Jon Bråte
▴ 250
0
votes
0
replies
2.2k
views
Plot exon number per gene and transcript lengths
Genetics
TranscriptDb
GenomicFeatures
9.7 years ago
Jon Bråte
▴ 250
0
votes
8
replies
2.8k
views
Expected number of DE genes?
Genetics
edgeR
DESeq2
Genetics
edgeR
DESeq2
updated 9.8 years ago by
Thomas Hampton
▴ 750 • written 9.8 years ago by
Jessica Perry Hekman
▴ 140
0
votes
2
replies
1.4k
views
Can my problem be addressed with Bioconductor?
Genetics
GOstats
SNPchip
topGO
Genetics
GOstats
SNPchip
topGO
updated 9.9 years ago by
James W. MacDonald
65k • written 9.9 years ago by
Guest User
★ 13k
0
votes
2
replies
2.0k
views
UCSC data anomaly in 50638 transcript(s): the cds cumulative length is
Genetics
GO
Regression
Cancer
TranscriptDb
Genetics
GO
Regression
Cancer
TranscriptDb
updated 10.0 years ago by
Tarca, Adi
▴ 570 • written 10.0 years ago by
Hervé Pagès
16k
0
votes
1
reply
1.7k
views
limma: percent of variance explained
Genetics
limma
Genetics
limma
updated 10.0 years ago by
Gordon Smyth
50k • written 10.0 years ago by
Julien Roux
▴ 90
0
votes
2
replies
1.3k
views
RNA-seq pathway analysis in Canis familiaris
RNASeq
Genetics
Annotation
Canis familiaris
gage
RNASeq
Genetics
Annotation
gage
updated 10.0 years ago by
James W. MacDonald
65k • written 10.0 years ago by
Jessica Perry Hekman
▴ 140
50 results • Page
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Answer: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
Your code is poorly readable. Suggest you select and then highlight with markdown using the `10101` button. Generally, colData(dds) must…
Answer: Subsetting RNAseq data | voomaByGroup()
by
Gordon Smyth
50k
Judging from your MDS plot, cell types 1 and 2 look radically different, so it would make perfect sense to analyse them separately. There's…
Answer: Numerical differences in DESeq2 output depending on different design matrix cons
by
Michael Love
42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs
by
Michael Love
42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Awards
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Dario Strbenac
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Vincent J. Carey, Jr.
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