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News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
3 months ago
shepherl
4.1k
0
votes
0
replies
199
views
News:
List of Deprecated Packages for Bioc3.20
Devel
Bioconductor
Release
3 months ago
shepherl
4.1k
0
votes
11
replies
1.7k
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
11 months ago • updated 3 months ago
shepherl
4.1k
3
votes
3
replies
1.3k
views
News:
Bioconductor 3.20 Release Schedule
software
release
Release
updated 3 months ago by
Gordon Smyth
52k • written 4 months ago by
shepherl
4.1k
4
votes
0
replies
926
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
9 months ago
shepherl
4.1k
0
votes
0
replies
515
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
9 months ago
shepherl
4.1k
0
votes
1
reply
1.0k
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
10 months ago
shepherl
4.1k
0
votes
1
reply
723
views
Rcpp compilation error
Release
Rcpp
updated 10 months ago by
ATpoint
★ 4.6k • written 10 months ago by
Robert K. Bradley
▴ 40
0
votes
0
replies
820
views
News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
12 months ago
shepherl
4.1k
5
votes
1
reply
1.4k
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 15 months ago by
shepherl
4.1k
1
vote
4
replies
871
views
rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene
Bioconductor3.18
DifferentialExpression
release
updated 14 months ago by
Michael Love
43k • written 14 months ago by
Nadine
▴ 60
0
votes
4
replies
1.5k
views
News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 15 months ago by
Guido Hooiveld
★ 4.1k • written 15 months ago by
shepherl
4.1k
1
vote
0
replies
1.1k
views
News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
16 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
1.1k
views
News:
Bioconductor 3.18 Release Schedule
Release
Software
release
17 months ago
shepherl
4.1k
1
vote
8
replies
1.8k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.8 years ago by
shepherl
4.1k
0
votes
0
replies
928
views
News:
Bioconductor 3.17 is Released!
Packages
Release
Bioconductor
Software
21 months ago
shepherl
4.1k
0
votes
0
replies
677
views
News:
Bioconductor Release 3.16 Code Freeze
release
Release
Bioconductor
21 months ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release
db0
Annotation
22 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
827
views
News:
Bioconductor 3.17 Release Schedule
Softwar
Release
Bioconductor
release
Software
22 months ago
shepherl
4.1k
1
vote
0
replies
1.1k
views
News:
Bioconductor 3.16 is Released!
Release
Packages
Bioconductor
Software
2.2 years ago
shepherl
4.1k
0
votes
0
replies
762
views
News:
Last day to make commits before Release 3.16
Release
Devel
Bioconductor
release
devel
2.2 years ago
shepherl
4.1k
0
votes
2
replies
1.0k
views
News:
List of Deprecated Packages for Bioc3.16
Release
Deprecation
Devel
Bioconductor
2.3 years ago
shepherl
4.1k
0
votes
0
replies
942
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
2.3 years ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release
db0
annotation
2.3 years ago
kayla.interdonato
▴ 160
4
votes
0
replies
962
views
News:
Bioconductor Release 3.16 Schedule
Release
Devel
packages
release
devel
2.4 years ago
shepherl
4.1k
8
votes
0
replies
1.2k
views
News:
Bioconductor 3.15 is Released!
Software
Release
Packages
Bioconductor
2.8 years ago • updated 2.7 years ago
shepherl
4.1k
0
votes
4
replies
1.6k
views
News:
List of Deprecated Packages for Bioc3.15
Devel
Deprecation
Release
Bioconductor
2.8 years ago • updated 2.3 years ago
shepherl
4.1k
0
votes
1
reply
1.2k
views
News:
Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation
release
db0
2.8 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
827
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
2.8 years ago
shepherl
4.1k
1
vote
0
replies
1.1k
views
News:
Bioconductor Release 3.15 Schedule
Devel
release
packages
Release
devel
2.9 years ago
shepherl
4.1k
0
votes
5
replies
1.7k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
3.3 years ago • updated 2.8 years ago
shepherl
4.1k
8
votes
0
replies
1.2k
views
News:
Bioconductor 3.14 is Released!
release
Packages
Software
Release
Bioconductor
3.3 years ago • updated 3.2 years ago
shepherl
4.1k
0
votes
0
replies
998
views
News:
New Package Submission Deadline for Bioc Release 3.14
newpackage
Deadline
Release
Submission
3.4 years ago
shepherl
4.1k
1
vote
0
replies
1.1k
views
News:
Bioconductor Release 3.14 Schedule
devel
Devel
release
packages
Release
3.4 years ago
shepherl
4.1k
7
votes
6
replies
2.1k
views
How to obtain summary statistics for all Bioc releases
bioconductor
release
6.7 years ago
Robert Ivanek
▴ 750
5
votes
0
replies
1.2k
views
News:
Bioconductor 3.13 is Released!
Release
Bioconductor
Packages
Software
3.7 years ago
shepherl
4.1k
0
votes
0
replies
889
views
News:
Last day to make commit before the RELEASE_3_13
Release
Devel
devel
release
Bioc3.13
3.7 years ago
shepherl
4.1k
0
votes
3
replies
1.3k
views
Bioconductor Release AMI's
Release
release
AWS
AMI
Bioconductor
updated 3.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 3.7 years ago by
shepherl
4.1k
1
vote
0
replies
1.2k
views
News:
Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation
release
db0
3.7 years ago
kayla.interdonato
▴ 160
1
vote
1
reply
1.3k
views
Rsync Access
release
rsync
873
updated 3.8 years ago by
Martin Morgan
25k • written 3.8 years ago by
workmanld
▴ 10
0
votes
1
reply
1.2k
views
News:
Bioconductor 3.13 New Package Submission Deadline
release
Submission
newpackage
Release
Deadline
3.8 years ago
shepherl
4.1k
0
votes
0
replies
992
views
News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
3.8 years ago • updated 3.7 years ago
shepherl
4.1k
0
votes
0
replies
1.1k
views
News:
Bioconductor Release 3.13 Schedule
release
Release
3.8 years ago
shepherl
4.1k
4
votes
0
replies
1.2k
views
News:
Bioconductor 3.12 is Released!
Software
release
Bioconductor
Packages
Release
4.3 years ago
shepherl
4.1k
0
votes
1
reply
1.2k
views
News:
Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation
db0
news
release
News
4.3 years ago
kayla.interdonato
▴ 160
1
vote
0
replies
1.2k
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
submission
deadline
News
4.3 years ago
shepherl
4.1k
0
votes
0
replies
1.2k
views
News:
Bioconductor Release 3.12 Schedule Posted
packages
release
deadlines
builds
News
4.4 years ago
shepherl
4.1k
1
vote
1
reply
1.2k
views
News:
Issues with annotation packages
annotation
news
release
News
4.7 years ago
kayla.interdonato
▴ 160
0
votes
0
replies
1.2k
views
News:
Bioconductor 3.11 OrgDb and TxDb packages now available
annotation
news
release
News
4.7 years ago
kayla.interdonato
▴ 160
4
votes
0
replies
981
views
News:
Bioconductor 3.11 is Released!
software
bioconductor
release
packages
News
4.8 years ago
shepherl
4.1k
50 results • Page
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Replies
Comment: How to visualize these pathways using pathview
by
Guido Hooiveld
★ 4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
Comment: Why select top highly expressed genes based on normalized counts, but then plot
by
Quang NN
▴ 10
I see. Thank you ATpoint!
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
by
Prakash Sah
• 0
Thanks James!
Comment: Why select top highly expressed genes based on normalized counts, but then plot
by
ATpoint
★ 4.6k
I think I explained what the differences between approach 1 and 2 is in my answer. I assume that the tutorial uses vst because it is varian…
Comment: Why select top highly expressed genes based on normalized counts, but then plot
by
Quang NN
▴ 10
Thank you ATpoint for your responses. I am a bit confused because the difference between the two approaches is the selection of the genes…
Votes
A: PDCD1 missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
PDCD1 missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
Bioconductor Course, Kenya 2025: Applications Open!
Comment: can't install tscR
Answer: Csaw normalization strategies - general inquiry
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