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1
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246
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How do I select a GC file (gc.wig)? (How to determine the inputdata of HMMcopy)
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updated 10 days ago by 65k • written 11 days ago by • 0
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Padj "NA" with thousands of low count although the raw read counts are quite large
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updated 11 days ago by 42k • written 11 days ago by • 0
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11 days ago Chris • 0
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Could we detect difference at pathway level but not significant different at gene level?
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12 days ago • updated 11 days ago Chris • 0
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Assist me in determining whether the analysis process using the limma package has been executed correctly.
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updated 10 days ago by 65k • written 12 days ago by • 0
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updated 12 days ago by ★ 4.1k • written 12 days ago by ▴ 10
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140
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Dominance Index for Shotgun Metagenomics Data
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updated 14 days ago by ▴ 40 • written 15 days ago by ★ 1.5k
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Deseq2. decontXcounts not integers. Useful alternative?
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updated 15 days ago by 42k • written 15 days ago by • 0
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7
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Math expression in shapeCustom legend in EnhancedVolcano
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15 days ago • updated 14 days ago pl23 • 0
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updated 15 days ago by 65k • written 16 days ago by • 0
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One error problem occurred caused by data type during using GDCprepare function of TCGAbiolinks to handle TCGAbiolinks BRCA data
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16 days ago • updated 8 days ago glaciya2018 • 0
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PCA plot suggestions
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updated 14 days ago by 42k • written 16 days ago by • 0
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160
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DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
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updated 16 days ago by 42k • written 16 days ago by • 0
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ATACseq merge peaks
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updated 15 days ago by ★ 4.1k • written 16 days ago by • 0
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how to do Differential splicing from SGSeq analysis
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17 days ago • updated 12 days ago Sara • 0
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Exon-exon Junction Analysis for Variable-length Exons
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17 days ago Dario Strbenac ★ 1.5k
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Reproducibility issue with scran together with lapply and BiocParallel
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17 days ago • updated 16 days ago ATpoint ★ 4.1k
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updated 17 days ago by 42k • written 17 days ago by ▴ 20
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Opposite sign of LFC in count plots of DEGs (DESeq2)
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17 days ago • updated 15 days ago winwater0928 • 0
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get BM error
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updated 16 days ago by 65k • written 17 days ago by • 0
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How to retrieve gene ontology GO class from gene list?
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updated 15 days ago by 65k • written 17 days ago by • 0
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Citation for edgeR user guide
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updated 17 days ago by 50k • written 17 days ago by ▴ 30
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Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
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updated 17 days ago by 42k • written 17 days ago by ▴ 40
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122
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Cannabis OrgDb
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updated 17 days ago by 65k • written 17 days ago by ▴ 10
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DESeq2 output used for PCA plot on R studio
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updated 16 days ago by ★ 1.4k • written 17 days ago by • 0
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News: Interested in the analysis of Spatial Omics data?
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18 days ago info ▴ 10
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featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_get_next_read_BIN: Assertion `l_name < 256' failed. Aborted (core dumpe…
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18 days ago • updated 16 days ago shuwangxinze1996 • 0
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written 18 days ago by • 0
3
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updated 17 days ago by ▴ 780 • written 18 days ago by • 0
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21 days ago • updated 9 days ago Chris • 0
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I am trying to detect alternative splicing.
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21 days ago Sebashish • 0
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updated 19 days ago by ★ 3.9k • written 21 days ago by ▴ 10
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FDR via q-value
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updated 19 days ago by 65k • written 21 days ago by • 0
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22 days ago • updated 19 days ago catv • 0
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How to make DGEList and design matrix by edgeR package
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updated 22 days ago by 65k • written 22 days ago by • 0
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FGSEA pre-ranked input in increasing order or decreasing
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22 days ago sropri • 0
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Error EPICv2 ChAMP
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updated 22 days ago by 50k • written 22 days ago by • 0
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Warning while loading DEP package
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updated 22 days ago by 3.9k • written 22 days ago by • 0
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updated 10 days ago by ★ 1.9k • written 23 days ago by • 0
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rlog transformation
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updated 22 days ago by 42k • written 23 days ago by • 0
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ONT long-read RNA sequencing - data analysis options
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updated 22 days ago by 42k • written 23 days ago by • 0
196 results • Page 2 of 4
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Answer: SingleR Label.Ont by Denis • 0
[Jackpot City Casino][1] is the perfect option when looking for an online casino in Canada for an exciting vacation and huge winnings that …
Comment: deseq2 results by sajadahmad41454 • 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results by swbarnes2 ★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code? by NATASHA • 0
did you find a solution? I´m having the same problem
Comment: error by NATASHA • 0
Please ignore, i didnt copy all the scrip
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