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News:
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Bioconductor
2.1 years ago • updated 19 months ago
shepherl
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News:
BSgenome package for T2T-CHM13v2.0 assembly and SNPlocs package for dbSNP155
BSgenome
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2.1 years ago
Hervé Pagès
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Bioc2022
Bioconductor
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shepherl
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Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
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2.1 years ago
kayla.interdonato
▴ 160
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News:
News:Ensembl 106 has just been released!
ensembl
biomaRt
ensembldb
2.1 years ago
Benjamin
▴ 30
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670
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News:
Bioconductor Community Engagement, Outreach, and Diversity Award
Bioc2022
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2.1 years ago
shepherl
3.9k
0
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0
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629
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News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
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Bioconductor
Devel
2.1 years ago
shepherl
3.9k
0
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671
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News:
Bioconductor Award for Outstanding Documentation
Bioc2022
Awards
Bioconductor
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2.1 years ago
shepherl
3.9k
1
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915
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News:
Bioc2022 Submissions for talks, demos, workshops and poster now open! Deadline Tomorrow March 29!
presentation
Conference
bioc2022
2.3 years ago • updated 2.1 years ago
shepherl
3.9k
1
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0
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516
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News:
scMET: Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
scMET
2.2 years ago
kapouranis.andreas
▴ 10
1
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840
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News:
Bioconductor Release 3.15 Schedule
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2.2 years ago
shepherl
3.9k
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News:
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bioconductoroversight
community
CAB
2.2 years ago
shepherl
3.9k
5
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bioconductoroversight
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2.3 years ago
shepherl
3.9k
0
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0
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848
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News:
BioC2022 Seattle July 27-29 hybrid conference organizing committee
bioc2022
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2.4 years ago
Levi Waldron
★ 1.1k
1
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803
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News:
Ensembl 105 has just been released!
ensembl
biomaRt
ensembldb
2.4 years ago
mchakiachvili
▴ 20
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5
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News:
Final List of Deprecated Packages for Bioc3.14
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2.6 years ago • updated 2.1 years ago
shepherl
3.9k
8
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906
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News:
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2.6 years ago • updated 2.5 years ago
shepherl
3.9k
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2
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1.0k
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News:
Ascona Workshop “Biological systems: from first principles to data-driven modelling and back” 27. 3. - 1. 4. 2022
theory
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ascona
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2.6 years ago • updated 15 months ago
Wolfgang Huber
★ 13k
3
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1
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713
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News:
Service problems noted
bioconductor
updated 2.6 years ago by
shepherl
3.9k • written 2.6 years ago by
Vincent J. Carey, Jr.
6.7k
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BioC Asia Virtual Meeting, 1-4 November 2021
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Asia
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2.7 years ago
Peter Hickey
▴ 740
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811
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New Package Submission Deadline for Bioc Release 3.14
newpackage
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2.7 years ago
shepherl
3.9k
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2.7 years ago
shepherl
3.9k
2
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News:
BioCAsia Virtual Meeting, 15-18 October 2020
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▴ 1000
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knitr ERROR on Biocondcutor builders
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2.8 years ago
shepherl
3.9k
3
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SinglePackageBuilder
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Bioconductor
2.8 years ago
shepherl
3.9k
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Bioconductor 2021 Scholarship and Caregiver Awards
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2.9 years ago
shepherl
3.9k
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Bioconductor
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3.0 years ago
shepherl
3.9k
5
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3.0 years ago
shepherl
3.9k
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Long-term Bioconductor Contribution Award
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3.0 years ago
shepherl
3.9k
2
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5
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News:
New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr
ATACSeq
DiffBind
ComplexHeatmap
ChIPSeq
updated 17 months ago by
Junsik
• 0 • written 3.0 years ago by
Rory Stark
★ 5.2k
0
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731
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News:
Last day to make commit before the RELEASE_3_13
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Bioc3.13
3.0 years ago
shepherl
3.9k
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805
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News:
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Bioconductor
Bioc2021
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3.0 years ago
shepherl
3.9k
1
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756
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News:
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Bioc2021
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Bioconductor
3.0 years ago
shepherl
3.9k
1
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836
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News:
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annotation
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db0
3.0 years ago
kayla.interdonato
▴ 160
2
votes
2
replies
1.5k
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News:
Final List of Deprecated Packages for Bioc3.13
Workflow
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3.4 years ago • updated 3.0 years ago
shepherl
3.9k
0
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0
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812
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News:
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Bioconductor
3.0 years ago
Charlotte Soneson
▴ 170
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News:
Ensembl 104 has just been released!
ensembldb
biomaRt
3.0 years ago
mchakiachvili
▴ 20
0
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831
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News:
Community engagement, outreach, and diversity award
awards
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Bioconductor
3.0 years ago
shepherl
3.9k
0
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News:
Bioconductor 3.13 New Package Submission Deadline
release
Submission
newpackage
Release
Deadline
3.1 years ago
shepherl
3.9k
0
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890
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News:
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recognition
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Bioconductor
3.1 years ago
shepherl
3.9k
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830
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News:
Terra / AnVIL R / Bioconductor Popup Workshops
AnVIL
workshop
Bioconductor
Terra
3.1 years ago
shepherl
3.9k
0
votes
0
replies
813
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News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
release
devel
deadline
3.1 years ago • updated 3.0 years ago
shepherl
3.9k
0
votes
0
replies
772
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News:
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Bioc2021
3.1 years ago
shepherl
3.9k
0
votes
0
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928
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News:
Bioconductor Release 3.13 Schedule
release
Release
3.1 years ago
shepherl
3.9k
0
votes
0
replies
792
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News:
Bioc2021 Registration is Open
Conference
Bioc2021
3.1 years ago
shepherl
3.9k
0
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replies
625
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News:
User handle changes to site
Bioconductor
handles
3.1 years ago
natay.aberra
10
0
votes
1
reply
1.1k
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News:
Updates to BiocFileCache, AnnotationHub, and ExperimentHub
BiocFileCache
AnnotationHub
ExperimentHub
cache
3.1 years ago
shepherl
3.9k
2
votes
0
replies
891
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News:
New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight
news
community
BiocVersion
3.1 years ago
Matthew Ritchie
▴ 1000
0
votes
1
reply
942
views
News:
SBGNview manuscript on bioRxiv now
pathway
SBGNview
Reactome
pathview
PANTHER
written 3.1 years ago by
Luo Weijun
★ 1.6k
0
votes
1
reply
943
views
News:
Submission Deadline for Bioc2021 Next Week!
Conference
Bioc2021
updated 3.2 years ago by
Levi Waldron
★ 1.1k • written 3.2 years ago by
shepherl
3.9k
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3 of 10
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Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network()
by
ninidea
• 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Comment: maSigPro genes from clusters
by
anne-laure
• 0
Hello It is a litlle bit late but I do not get how to extract the genes from each cluster identified by see.genes(sigs$sig.genes$Day4vs…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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