Showing : Cancer • reset
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Job: PostDoc at Novartis Oncology Basel - Intratumor heterogeneity
cancer genomics postdoc job Job
9.5 years ago Kauffmann, Audrey ▴ 60
1
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2
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3.0k
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TCGAbiolinks data download problem
cancer microarray bioconductor tcgabiolinks
9.5 years ago Fernando • 0
0
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1
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1.6k
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'could not find function "R (>= 2.1"' while trying https://bioconductor.org/packages/3.2/bioc, trying https://bioconductor.org/packages/3.1/bioc …
cancer probe microarray
updated 9.5 years ago by 25k • written 9.5 years ago by • 0
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1
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1.7k
views
LuminalA Breast cancer subtype samples from GEO GSE62944
tcga cancer BreastCancer gse62944 luminalA
updated 9.5 years ago by ▴ 150 • written 9.5 years ago by • 0
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2
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1.6k
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Differential gene expression analysis for GSE62944
R limma cancer tcga bioconductor
updated 9.5 years ago by ★ 6.8k • written 9.5 years ago by • 0
1
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1
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1.8k
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Question about EAGenes (TCGAbiolinks)
annotation cancer biomart genetics R
updated 9.6 years ago by ▴ 260 • written 9.6 years ago by • 0
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0
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1.9k
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Job: Postdoctoral Fellow @ Fred Hutch Cancer Research Center Seattle, WA
cancer job postdoc Job
9.6 years ago jhuszar • 0
0
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0
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1.8k
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Job: 2015 Movember Foundation PhD Studentship in Bioinformatics @ UEA, Norwich, UK
Phd NGS cancer prostate Job
9.6 years ago Daniel Brewer ▴ 100
0
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0
replies
2.3k
views
Job: Bioinformatics Data Analyst in Cancer Immunology
job NGS Data Analyst Cancer Job
9.7 years ago Jaritz,Markus ▴ 20
0
votes
3
replies
1.4k
views
detect cancer in some tissue
cancer differential gene expression
updated 9.7 years ago by ▴ 10 • written 9.9 years ago by • 0
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0
replies
1.9k
views
Job: Graduate Student in Cancer Genomics / Machine Learning Brigham Young University
machinelearning cancer Job
9.8 years ago Stephen Piccolo ▴ 600
1
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0
replies
2.1k
views
Job: Post-doc Position in Epigenetic Bioinformatics
cancer sequencing epigenetics computational biology bioinformatics Job
9.9 years ago Yassen Assenov ▴ 10
1
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0
replies
1.9k
views
Job: Postdoc in Computational Biology
jobs computational biology cancer Job
9.9 years ago Bernd Fischer ▴ 550
0
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0
replies
1.2k
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Job: Postdoctoral position for Bioinformatician at Yale University
cancer Job
9.9 years ago narendra.wajapeyee • 0
0
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3
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2.3k
views
Minfi "mapToGenome" error when attempting to generate a genomicRatioSet
Cancer convert minfi Cancer convert minfi
updated 9.9 years ago by • 0 • written 11.6 years ago by ★ 6.5k
1
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5
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2.3k
views
'version' is missing error when running makeTxDbPackageFromUCSC
Cancer TranscriptDb IRanges GenomicFeatures Cancer TranscriptDb IRanges GenomicFeatures
updated 10.0 years ago by ▴ 10 • written 12.1 years ago by 16k
1
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1
reply
1.3k
views
Normalizing Gene Expression files from two different platforms
microarray cancer
updated 10.0 years ago by 53k • written 10.1 years ago by ▴ 10
6
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2
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4.1k
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Is ComBat introducing a signal where there is none?
Microarray Clustering Cancer limma Microarray Clustering Cancer limma
11.8 years ago • updated 10.1 years ago Vegard Nygaard ▴ 120
1
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2
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2.8k
views
Job: Postdoctoral Research Fellow in Bioinformatics – Systems Biology of Childhood Cancer
bioinformatics systemsbiology cancer job austria Job
10.3 years ago • updated 10.1 years ago heinrich.kovar ▴ 10
0
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1
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1.4k
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SNPlocs package for dbSNP 135
Cancer SNPlocs Cancer SNPlocs
updated 10.2 years ago by • 0 • written 13.7 years ago by 16k
2
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1
reply
1.6k
views
Best way to do quality control and analysis on Exon arrays
Annotation Cancer affy exonmap Annotation Cancer affy exonmap
updated 10.2 years ago by ▴ 10 • written 16.3 years ago by ★ 1.9k
1
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2
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2.3k
views
QC/normalization standards for cancer studies with 450k array data
minfi watermelon cancer 450k normalization
updated 10.2 years ago by ★ 6.5k • written 10.2 years ago by ▴ 10
0
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6
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2.9k
views
dbSNP build for R package SNPlocs.Hsapiens.dbSNP.20080617
SNP Cancer SNPlocs SNP Cancer SNPlocs
updated 10.2 years ago by • 0 • written 16.4 years ago by 16k
0
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0
replies
1.8k
views
Circos Styling plots is now easy with canceR package
canceR visualization omiccircos
10.4 years ago kmezhoud ▴ 10
0
votes
1
reply
3.2k
views
CanceR: Survival plots
cancer gui survival Kaplan-Meier
10.5 years ago • updated 10.4 years ago kmezhoud ▴ 10
1
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0
replies
2.3k
views
Job: Harvard Medical School Postdoc- The Center for Biomedical Informatics
cancer genomic analysis computational biology Job
10.5 years ago Doe, Aimee ▴ 40
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0
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2.6k
views
TCGA RSEM normalized RNAseqV2 counts
normalization cancer tcga
10.5 years ago ezz • 0
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0
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1.3k
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Invitation Research Collaborations
cancer microarray mirna sequencing
10.5 years ago alexandru.floares • 0
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0
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1.9k
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Job: Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer translation ngs genomics Job
10.6 years ago jhjohnsn • 0
0
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1
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2.0k
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Job: Bioinformatics Post-Doc Positions
cancer BIOINFORMATICS genomics RNAseq miRseq Job
10.6 years ago aaron • 0
0
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3
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2.5k
views
Affymetrix ReadAffy() can't read my CEL file
microarray affy cancer hgu133plus2 package
updated 10.6 years ago by 68k • written 10.6 years ago by ▴ 10
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0
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1.3k
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Job: Cancer Genomics Analysis Post
cancer genomics Job
10.8 years ago crispin.miller • 0
0
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0
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2.0k
views
Job: Single Cell Cancer Genomics
cancer single cell genomics Job
10.8 years ago crispin.miller • 0
0
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0
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2.0k
views
Job: Research Associate (Postdoctoral) position at the MRC Cancer Unit, University of Cambridge, UK.
job computational biology genomics cancer systemsbiology Job
10.9 years ago Shamith.Samarajiwa ▴ 180
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0
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1.6k
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Job: Computational Biologist Research Associate Position at the University of Cambridge
cancer sequencing prostate Job
11.0 years ago Andy Lynch ▴ 120
2
votes
0
replies
2.6k
views
Job: Job Opening: Computational Biologist @ Genentech Bioinformatics
Job Sequencing Genetics Cancer
updated 11.1 years ago by ★ 8.2k • written 11.1 years ago by ★ 11k
0
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5
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2.4k
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Course: Learning R / Bioconductor for Sequence Analysis, Seattle, WA Oct 27-29
Annotation Cancer
updated 11.1 years ago by ▴ 40 • written 11.1 years ago by 25k
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0
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1.4k
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回复： XVector
Network Cancer IRanges XVector
11.1 years ago Hervé Pagès 16k
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0
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1.6k
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XVector
Cancer XVector
11.1 years ago Hervé Pagès 16k
0
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0
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1.5k
views
[devteam-bioc] parallel BAM sorting with Rsamtools
Cancer Rsamtools BiocParallel
11.1 years ago Jens Reeder ▴ 40
0
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0
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1.4k
views
subseq with iranges on reverse strand
Cancer BSgenome BSgenome IRanges Cancer BSgenome BSgenome IRanges
11.1 years ago Hervé Pagès 16k
0
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0
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1.6k
views
Bioinformatics Analyst opportunity at the University of Cambridge/Cancer Research UK (Permanent, full-time)
Microarray Cancer Microarray Cancer
11.1 years ago Suraj Menon ▴ 10
1
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1
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2.2k
views
Multifactor model design for DE analysis (DESeq2 & edgeR)
Cancer edgeR DESeq2 Cancer edgeR DESeq2
updated 11.1 years ago by ★ 3.8k • written 11.1 years ago by ▴ 30
0
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0
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1.1k
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Microarray data normalization
Normalization GO Cancer probe affy Normalization GO Cancer probe affy
11.2 years ago Levi Waldron ▴ 80
0
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1
reply
1.4k
views
Microarray data normalization
Microarray Normalization Cancer Microarray Normalization Cancer
updated 11.2 years ago by ★ 13k • written 11.2 years ago by ▴ 10
0
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0
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978
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Follow up on progress for brainarray cdfs on exon arrays.
Cancer oligo Cancer oligo
11.2 years ago Sin Yee Ku ▴ 10
0
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1
reply
1.3k
views
Putative bug in Biostrings
Alignment Cancer Biostrings Alignment Cancer Biostrings
updated 11.2 years ago by ▴ 10 • written 11.2 years ago by 16k
0
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0
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983
views
Bioc 2014 July 31 - August 1, Boston
Cancer Cancer
11.2 years ago Martin Morgan 25k
1
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1
reply
3.4k
views
DESeq2 plotPCA and scale
Cancer Cancer
updated 11.2 years ago by 43k • written 11.2 years ago by ▴ 100
0
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4
replies
5.9k
views
pca plot for gene expression
Cancer Cancer
updated 11.2 years ago by 43k • written 11.2 years ago by ★ 13k
1,555 results • Page 3 of 32
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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