Showing : Cancer • reset
2
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4
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1.7k
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SCAN.UPC : lost too many samples from GSE (BrainArray + ConvThreshold)
SCAN.UPC probe normalization GEOdata cancer
6.5 years ago s.goncalvesclaro ▴ 10
0
votes
0
replies
1.2k
views
Job: Summer Studentships in Data Science & Computational Biology (2019) at the University of Cambridge
R Python Computational-Biology Cancer Job
6.5 years ago Shamith.Samarajiwa ▴ 180
0
votes
0
replies
1.3k
views
Job: Research Fellow, Computational Multi-Omics of Cancer (University College London)
cancer multi-omics genomic instability machine learning data integration Job
6.5 years ago msecrier ▴ 20
6
votes
7
replies
1.8k
views
Appropriate experimental design for differential expresion
edgeR normalization cancer
updated 6.5 years ago by ★ 1.4k • written 6.5 years ago by ▴ 30
0
votes
1
reply
907
views
Getting a signature specific to each patient
DESeq2 r cancer
updated 6.6 years ago by 68k • written 6.6 years ago by ▴ 30
0
votes
0
replies
963
views
Job: Postdoctoral Research Fellowship: Computational Biology & Cancer Immunotherapy
cancer Job
6.6 years ago luznile • 0
0
votes
2
replies
4.4k
views
Web Scraping From Pubmd (I want to extract gene articles form pubmed abstract and pubmed id i want to extract for number of genes)
cancer gene
updated 6.6 years ago by 25k • written 6.6 years ago by • 0
2
votes
0
replies
1.3k
views
Job: Research Fellow, Computational Cancer Genomics (University College London)
cancer genomics machine learning data integration multi-omics Job
6.7 years ago msecrier ▴ 20
2
votes
5
replies
2.3k
views
edgeR or wilcoxon rank test? Which is right?
edgeR r wilcox RNA-seq cancer
6.7 years ago AZ ▴ 30
2
votes
3
replies
1.3k
views
Batch correction for a sets of genes
cancer deseq2 r rnaseq
updated 6.7 years ago by 43k • written 6.7 years ago by ▴ 30
0
votes
1
reply
1.5k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 6.7 years ago by 68k • written 6.7 years ago by • 0
0
votes
2
replies
2.1k
views
Solexa fastq files and BLAT
Cancer Biostrings ShortRead Cancer Biostrings ShortRead
updated 6.8 years ago by 0 • written 16.7 years ago by ★ 1.9k
3
votes
0
replies
2.1k
views
Job: Postdoctoral Scientist position at intersection of Single-Cell Cancer Genomics, Data Science and Bioconductor Software Development
job single-cell data science cancer genomics Job
6.8 years ago Stephanie Hicks ▴ 80
1
vote
0
replies
1.4k
views
Job: CRUK Cambridge Centre MRes + PhD in Cancer Biology (Cross-Programme Quantitative Projects)
PhD cancer deep learning computational biology Job
6.9 years ago Shamith.Samarajiwa ▴ 180
0
votes
0
replies
1.3k
views
Job: Stipendium Hungaricum Fellowship with the Computational Biology Group of Semmelweis University
cancer genomics job budapest bioinformatics Job
6.9 years ago Endre Sebestyén ▴ 70
0
votes
3
replies
1.3k
views
TMM normalization of cancer RNA seq
cancer normalization
updated 6.9 years ago by ★ 13k • written 6.9 years ago by • 0
1
vote
2
replies
1.4k
views
genes repeated in the heatmap several times(10x) when using limma
limma normalization heatmap design and contrast matrix cancer
updated 7.0 years ago by ★ 1.1k • written 7.0 years ago by • 0
0
votes
0
replies
1.3k
views
Job: Research Associate- Production Bioinformatics - Atlantic Cancer Research Institute - Moncton -New Brunwsiwck - Canada
cancer bioinformatics bioinformatician job sequencing Job
7.1 years ago gabriel.wajnberg • 0
0
votes
0
replies
1.4k
views
Job: Postdoctoral Associate - Cancer Computational Biology
cancer genomics xenograph cloud Job
7.3 years ago tyler.chukwu • 0
0
votes
0
replies
1.5k
views
Job: Post-doc in Prostate Cancer Research (Statistics / Computational Biology) at University of St Andrews (+PhD position also available)
cancer sequencing rnaseq methylation smallrna Job
7.3 years ago Andy Lynch ▴ 120
0
votes
0
replies
1.4k
views
Job: Job: Senior Scientist, Oncology Translational Research Johnson and Johnson
cancer jobs computational biology bioinformatics Job
7.3 years ago Michael Gormley ▴ 60
1
vote
0
replies
1.4k
views
Job: Summer Vacation Studentships in Data Science, MRC Cancer Unit, University of Cambridge, UK
data science data visualization machine learning cancer Job
7.5 years ago • updated 7.3 years ago Shamith.Samarajiwa ▴ 180
0
votes
2
replies
3.9k
views
Going crazy with normalizing TCGA raw rsem gene count
cancer tcga normalization rnaseq differential gene expression
updated 7.5 years ago by • 0 • written 10.5 years ago by • 0
1
vote
0
replies
1.8k
views
Job: UK/EU funded PhD Studentship: Detecting novel subtypes of cancer using data science and machine learning
PhD clustering cancer Job
7.8 years ago • updated 7.6 years ago Daniel Brewer ▴ 100
3
votes
1
reply
802
views
Gene expression analysis
cancer R
updated 7.6 years ago by 68k • written 7.6 years ago by • 0
0
votes
0
replies
1.4k
views
How to call "DBA_CONDITION" for mutiple conditions and How to control GLM program
cancer deseq2 edger CONDITIONS DBA
7.7 years ago arcucamila • 0
1
vote
1
reply
1.4k
views
soggi average plot
soggi multiple bam cancer
updated 7.7 years ago by ▴ 10 • written 7.8 years ago by • 0
3
votes
0
replies
3.1k
views
Job: PhD opportunity in Cambridge (Computational Biology and Data Science)
cancer deep learning genomics Job computational biology
8.0 years ago • updated 7.9 years ago Shamith.Samarajiwa ▴ 180
2
votes
2
replies
1.7k
views
Solving error for error of factors
deseq2 cancer R
updated 8.1 years ago by 43k • written 8.1 years ago by ▴ 30
0
votes
4
replies
1.8k
views
base of B-value log in Limma
Cancer limma Cancer limma
updated 8.2 years ago by 53k • written 19.4 years ago by ★ 2.0k
0
votes
3
replies
2.1k
views
Analysing TCGA Level 3 Copy Number Data Location of markers in the genome
TCGA Cancer dnacopy segmentation
updated 8.3 years ago by ▴ 130 • written 8.3 years ago by • 0
0
votes
2
replies
1.8k
views
Converting Exon counts(co-ordinates) to transcript/gene ids
dexseq bioconductor cancer rna-seq
8.3 years ago Shrule • 0
0
votes
0
replies
1.7k
views
Job: Postdoc in Bioinformatics for Cancer Genomics
cancer genomics bioinformatics machine learning next-generation sequencing Job
8.3 years ago yang4414 • 0
0
votes
0
replies
1.5k
views
Job: Hunting for Human Infectious Agents in Cancer using data from Genomics England's 100,000 genome project : PhD Studentship @ UEA, Norwich
phd cancer pathogens NGS Job
8.4 years ago Daniel Brewer ▴ 100
1
vote
0
replies
1.5k
views
Job: Biomarker Data Analysis: Development of a Test for Prostate Cancer : PhD Studentship @ UEA, Norwich
phd cancer Job
8.4 years ago Daniel Brewer ▴ 100
0
votes
8
replies
2.6k
views
raw probe set expression data and masking questions
Normalization Cancer probe affy PROcess Normalization Cancer probe affy PROcess
updated 8.5 years ago by ▴ 40 • written 19.1 years ago by ▴ 20
0
votes
1
reply
1.2k
views
analysis of biomarker data from elisa
cancer
updated 8.7 years ago by 68k • written 8.7 years ago by • 0
1
vote
2
replies
4.6k
views
mixed model using limma-voom
limma cancer
9.0 years ago Yanzhu Lin ▴ 120
0
votes
0
replies
1.4k
views
Job: Bioinformatician/Bioinformatics Data Analyst, CCRI Vienna, Austria
bioinformatician job computational biology cancer genomics job Job
9.0 years ago Max Kauer ▴ 140
0
votes
2
replies
1.0k
views
interaction formulas without replicates
cancer
updated 9.0 years ago by ★ 29k • written 9.0 years ago by ▴ 10
0
votes
0
replies
2.1k
views
Job: Postdoc / Computational Biologist for circulating tumor DNA/RNA profiling at Memorial Sloan Kettering Cancer Center MSKCC, New York
cancer sequencing genetics genomes diagnostic Job
9.1 years ago dtlabmskcc • 0
0
votes
0
replies
1.6k
views
Job: 2 year bioinformatics postdoc in the microbiome and prostate cancer risk @ UEA, Norwich, UK
Cancer microbiome postdoc UK prostate cancer Job
9.2 years ago Daniel Brewer ▴ 100
0
votes
0
replies
1.2k
views
Job: Postdoctoral position in computational genomics of cancer at Cold Spring Harbor Laboratory
cancer genomics pharmacogenomics bioinformatics organoid Job
9.3 years ago glt38sheltie • 0
0
votes
4
replies
1.0k
views
Asking for dataset Chronic Lymphocytic Leukemia
cancer
9.3 years ago msh609361 • 0
1
vote
4
replies
2.6k
views
How to install old GenomicRanges 1.14.4 package ?
bioconductor R cancer probe deseq2
updated 9.4 years ago by ▴ 10 • written 9.4 years ago by • 0
2
votes
0
replies
1.5k
views
Job: Two Post-doctoral positions at the CRUK Cambridge Institute
cancer methylation rna-seq Job
9.4 years ago Andy Lynch ▴ 120
1
vote
0
replies
1.6k
views
Job: Computational Biologist position in CRUK Manchester Institute, UK
bioinformatician job ngs leukemia cancer Job
9.4 years ago Hui Sun Leong ▴ 10
0
votes
0
replies
1.2k
views
Job: Post-doctoral position in algorithms for cancer data analysis
algorithms ChIP-seq cancer Job
9.4 years ago valentina.boeva • 0
1
vote
0
replies
1.3k
views
Job: Summer Studentship in Data Science (Cancer Research) at the University of Cambridge
cancer summer studentship Job
9.4 years ago Shamith.Samarajiwa ▴ 180
3
votes
0
replies
1.9k
views
Job: PhD Positions in Computational Cancer Research
jobs bioinformatics biostatistics cancer next-generation sequencing Job
9.4 years ago Bernd Fischer ▴ 550
1,555 results • Page 2 of 32
Recent ...
Replies
Comment: Help with defining groups by Phinney, Brett ▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness by massimo • 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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