Showing : NGS • reset
0
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6
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13k
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converting fasta file into bam file
ngs
6.9 years ago nosheenfaiz09 • 0
7
votes
4
replies
7.0k
views
how can I tell if a RNAseq BAM file is paired end or single end ?
NGS BAm
updated 9.4 years ago by ▴ 390 • written 9.4 years ago by ▴ 50
0
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5
replies
4.6k
views
bioconductor package for BWA-MEM ?
bwa ngs
updated 8.8 years ago by 50k • written 8.8 years ago by ▴ 50
1
vote
11
replies
2.6k
views
rsubread versus BWA ( Burrows-Wheeler Alignmener) for whole genome alignment
rsubread BWA NGS
updated 7.7 years ago by ★ 3.6k • written 7.7 years ago by ▴ 10
4
votes
4
replies
2.4k
views
Average read counts and batch-effect correction in edgeR
edgeR batch-effect RNA-seq read counts ngs
updated 5.4 years ago by ★ 28k • written 5.4 years ago by ▴ 20
1
vote
0
replies
2.3k
views
Job: Postdoctoral/Senior Scientist Position in New York City- Mount Sinai School of Medicine
genomics data integration job ngs computational biology Job
9.0 years ago supindab ▴ 10
0
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0
replies
2.0k
views
Job: Bioinformatics Data Analyst in Cancer Immunology
job NGS Data Analyst Cancer Job
8.3 years ago Jaritz,Markus ▴ 20
0
votes
0
replies
1.9k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
5.9 years ago • updated 3.5 years ago Luo Weijun ★ 1.6k
0
votes
0
replies
1.7k
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Job: Bioinformatician / NGS Data Analyst (Stark Group, Vienna, Austria)
bioinformatician job ngs genomics Job
9.1 years ago stark • 0
1
vote
3
replies
1.7k
views
copy number variation analysis (CNV)
copynumber plot visualization NGS gene
updated 3.4 years ago by ▴ 210 • written 3.6 years ago by • 0
1
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4
replies
1.7k
views
TarSeqQC TargetExperiment() Error- failed to stop SOCKcluster cluster-error writing to connection
TarSeqQC R ngs biocparallel
updated 6.9 years ago by 25k • written 6.9 years ago by ▴ 10
0
votes
1
reply
1.6k
views
Plotting bigwig coverage over chromosomal coordinates with wiggleplotr
wiggleplotr bigwig coverage ngs
updated 6.6 years ago by ▴ 30 • written 6.6 years ago by • 0
0
votes
0
replies
1.6k
views
Job: Computational Biologist (Genome Statistical Analyst) position in CRUK Manchester Institute, UK
job bioinformatics ngs genomics statistics Job
8.2 years ago Hui Sun Leong ▴ 10
0
votes
0
replies
1.6k
views
Job: Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer translation ngs genomics Job
9.2 years ago jhjohnsn • 0
1
vote
0
replies
1.6k
views
Job: Job Opening: Computational Biologists in Cambridge, MA and NYC
ngs computational biology R genomics bioinformatics Job
8.6 years ago mmartin ▴ 20
2
votes
1
reply
1.5k
views
rtracklayer BigBed format
ngs rtracklayer bigbed
updated 5.4 years ago by ★ 11k • written 5.4 years ago by ▴ 100
1
vote
0
replies
1.5k
views
News: Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
workshop ngs training News
9.6 years ago Thomas Girke ★ 1.7k
0
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0
replies
1.4k
views
Job: Senior Research Associate in Bioinformatics, Norwich Medical School, UEA, UK
bioinformatician job biofilm NGS Job
8.8 years ago Daniel Brewer ▴ 100
0
votes
0
replies
1.4k
views
Job: 2015 Movember Foundation PhD Studentship in Bioinformatics @ UEA, Norwich, UK
Phd NGS cancer prostate Job
8.2 years ago Daniel Brewer ▴ 100
0
votes
0
replies
1.3k
views
Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
5.3 years ago • updated 4.5 years ago Luo Weijun ★ 1.6k
1
vote
0
replies
1.3k
views
Job: Computational Biologist position in CRUK Manchester Institute, UK
bioinformatician job ngs leukemia cancer Job
8.0 years ago Hui Sun Leong ▴ 10
0
votes
0
replies
1.3k
views
Job: EXTENDED: Bioinformatics Specialist at the University of Illinois
microbiome epigenomics bioinformatics analyst NGS Job
6.1 years ago Jenny Drnevich ★ 2.0k
1
vote
0
replies
1.3k
views
Job: Computational Biologist position in CRUK Manchester Institute, UK
ngs prostate cancer genomics computational biology bioinformatician job Job
6.9 years ago • updated 6.8 years ago huisun.leong ▴ 10
0
votes
0
replies
1.3k
views
Job: Senior Bioinformatician, Children's Cancer Research Institute Vienna, Austria
postdoc rnaseq NGS WGS bioinformatician job Job
6.3 years ago da.de ▴ 30
0
votes
0
replies
1.2k
views
Job: Bioinformatician / Statistician Position - Ref.: 2016/45 - in Badalona, Barcelona, Spain
ngs microarray bioinformatician job Job
7.9 years ago Lauro Sumoy ▴ 10
0
votes
0
replies
1.2k
views
Job: Hunting for Human Infectious Agents in Cancer using data from Genomics England's 100,000 genome project : PhD Studentship @ UEA, Norwich
phd cancer pathogens NGS Job
7.0 years ago Daniel Brewer ▴ 100
0
votes
0
replies
1.2k
views
Job: Bioinformatics Engineer / Data Analyst
python bio ngs linux Job
6.2 years ago EMBL Recruitment • 0
0
votes
1
reply
1.1k
views
counting reads with muliple hits with SummarizeOverlaps
R seq ngs summarizeoverlaps
updated 6.1 years ago by ★ 6.8k • written 6.1 years ago by • 0
0
votes
0
replies
1.0k
views
Job: Two bioinformatics positions at Boston Children's Hospital
NGS Job
updated 3.5 years ago by 42k • written 3.6 years ago by • 0
0
votes
0
replies
1.0k
views
Job: Bioinformatician ('CHBIO15) (m/f)
bioinformatician job Linux NGS Job
5.5 years ago l.brown ▴ 10
0
votes
0
replies
969
views
Sequencing database tool in R: tracking Sanger and NGS of large-scale directed evolution projects
rmysql fastq seqinr ngs sangerseqr
6.0 years ago JoeMG • 0
0
votes
0
replies
888
views
Job: Open position for a bioinformatician in Copenhagen
R NGS Job
5.8 years ago gretchen.repasky ▴ 20
0
votes
0
replies
872
views
Job: Research Associate in Genomics Pipelines @ UEA, Norwich, UK
pipelines NGS Research associate Docker Job
4.8 years ago Daniel Brewer ▴ 100
0
votes
0
replies
704
views
Job: Bioinformatics Analyst/Data Science Analyst
bioinformatics ngsReports NGS analyst science
14 months ago marisona.almazan • 0
0
votes
0
replies
686
views
Rsamtools and data.table OR advice of packages
data.table Rsamtools NGS
2.3 years ago sara • 0
0
votes
0
replies
175
views
Job: PhD-position in bioinformatics / computational biology
Mergeomics Epigenome Evolution NGS Aging
5 weeks ago arne.sahm • 0
36 results • Page 1 of 1
Recent ...
Replies
Answer: Numerical differences in DESeq2 output depending on different design matrix cons by Michael Love 42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs by Michael Love 42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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