Showing : Packages • reset
4
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0
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135
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
16 days ago shepherl 3.9k
5
votes
1
reply
464
views
News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 6 months ago by 3.9k
0
votes
0
replies
610
views
News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
12 months ago shepherl 3.9k
0
votes
2
replies
600
views
Bioconductor API or dataset
Bioconductor Packages Dataset API
updated 15 months ago by 700 • written 15 months ago by • 0
1
vote
0
replies
809
views
News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
18 months ago shepherl 3.9k
4
votes
0
replies
667
views
News: Bioconductor Release 3.16 Schedule
Release Devel packages release devel
20 months ago shepherl 3.9k
0
votes
1
reply
1.2k
views
trouble installing DESeq2
install packages R DESeq2
updated 2.0 years ago by 3.9k • written 2.0 years ago by • 0
0
votes
2
replies
1.1k
views
cannot install various functions in R
GRanges packages installation
updated 2.0 years ago by 3.9k • written 2.0 years ago by • 0
8
votes
0
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881
views
News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
2.1 years ago • updated 2.0 years ago shepherl 3.9k
1
vote
6
replies
2.2k
views
Bioconductor installation problems
packages installation Bioconductor updating
updated 2.1 years ago by 700 • written 2.2 years ago by ▴ 10
1
vote
0
replies
840
views
News: Bioconductor Release 3.15 Schedule
Devel release packages Release devel
2.2 years ago shepherl 3.9k
8
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0
replies
906
views
News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
2.6 years ago • updated 2.5 years ago shepherl 3.9k
1
vote
0
replies
863
views
News: Bioconductor Release 3.14 Schedule
devel Devel release packages Release
2.7 years ago shepherl 3.9k
0
votes
0
replies
819
views
News: knitr ERROR on Biocondcutor builders
Devel Bioconductor Packages BuildReport devel
2.8 years ago shepherl 3.9k
0
votes
1
reply
669
views
Notification for package release?
packages
updated 3.0 years ago by ▴ 730 • written 3.0 years ago by ▴ 10
5
votes
0
replies
1.0k
views
News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
3.0 years ago shepherl 3.9k
4
votes
0
replies
953
views
News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
3.6 years ago shepherl 3.9k
0
votes
0
replies
996
views
News: Bioconductor Release 3.12 Schedule Posted
packages release deadlines builds News
3.7 years ago shepherl 3.9k
0
votes
3
replies
1.3k
views
Cant update old packages
software error packages update
updated 3.8 years ago by 65k • written 3.8 years ago by • 0
0
votes
4
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2.2k
views
Error: unexpected string constant in "suppressPackageStartupMessages(.getRequiredPackages(quietly = TRUE)), when installed the package "Mus.musculus"…
install packages Mus.musculus
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by • 0
1
vote
1
reply
870
views
Error when installing edgeR and DESeq package
software error packages
updated 3.9 years ago by 65k • written 3.9 years ago by • 0
1
vote
5
replies
3.0k
views
Updating Out of Date BiocManager Packages
biocmanager valid update packages
updated 4.0 years ago by ★ 3.9k • written 4.0 years ago by • 0
3
votes
3
replies
1.3k
views
Incomplete Install of Bioconductor Packages
Installation Packages Missing
updated 3.8 years ago by 1.6k • written 4.0 years ago by ▴ 10
4
votes
0
replies
827
views
News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.1 years ago shepherl 3.9k
3
votes
4
replies
1.5k
views
Can't install packages on R or via Bioconductor
R installation packages annotatr biocmanager
4.1 years ago dakarai_esgdaille ▴ 10
1
vote
0
replies
785
views
News: Bioconductor Release 3.11 Schedule Posted
release deadlines builds packages News
4.2 years ago shepherl 3.9k
0
votes
2
replies
1.3k
views
Unable to install package
packages installation GenomeGraphs
updated 4.3 years ago by 65k • written 4.3 years ago by • 0
2
votes
2
replies
1.0k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
4.5 years ago shepherl 3.9k
6
votes
0
replies
866
views
News: Bioconductor 3.10 is released!!
release software packages bioconductor News
4.6 years ago shepherl 3.9k
0
votes
1
reply
1.1k
views
Couldnt find getAE and ae2bioc?
getAE ae2bioc bioconductor packages library
updated 4.7 years ago by ★ 6.5k • written 4.7 years ago by • 0
1
vote
4
replies
1.5k
views
Merging two files based on the identifier column (gene symbols)?
merge files R packages gene annotations
4.7 years ago mohammedtoufiq91 ▴ 10
0
votes
1
reply
4.7k
views
monocle error at orderCells
scRNA monocle packages Tutorial
4.7 years ago 444579004 • 0
0
votes
1
reply
1.8k
views
R: oligo packages install error
oligo packages error
updated 4.9 years ago by 25k • written 4.9 years ago by • 0
0
votes
1
reply
1.9k
views
Installation of r2excel package
github packages
updated 5.3 years ago by 50k • written 5.3 years ago by ▴ 10
2
votes
1
reply
1.0k
views
Large Size of R packages containing S4 classes
S4 packages
updated 5.7 years ago by ★ 11k • written 5.7 years ago by ▴ 10
1
vote
1
reply
993
views
News: DEADLINE: commits to Bioc 3.7
release bioconductor packages package updates News
6.1 years ago shepherl 3.9k
0
votes
2
replies
2.0k
views
Issues installing packages miniconda environment
bioclite deseq2 miniconda packages
6.2 years ago cpat • 0
2
votes
2
replies
1.3k
views
Packages employing RangedSummarizedExperiment objects
rangedsummarizedexperiment packages granges iranges
updated 6.4 years ago by ★ 28k • written 6.4 years ago by ▴ 60
1
vote
2
replies
2.4k
views
Error : object path is not exported by namespace:Rsamtools
packages installation problem rsamtools chippeakanno ensembldb
6.4 years ago inzirio ▴ 10
0
votes
1
reply
1.1k
views
News: Single Package Builder Updates and Testing
packages review spb News
6.4 years ago shepherl 3.9k
0
votes
2
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1.3k
views
News: Single Package Builder / New Package Submission
new submission build report packages News
6.5 years ago shepherl 3.9k
12
votes
5
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1.9k
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News: DOI for packages
DOI doi packages citation publication News
6.6 years ago shepherl 3.9k
3
votes
3
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1.5k
views
Question regarding best bioconductor package for RNA-seq
rna-seq packages
updated 7.2 years ago by ▴ 360 • written 7.2 years ago by ▴ 10
3
votes
6
replies
2.2k
views
List of package names with versions
packages
updated 8.2 years ago by • 0 • written 8.2 years ago by • 0
0
votes
0
replies
1.5k
views
News: New Package Submission Deadline
Packages News
8.2 years ago Martin Morgan 25k
0
votes
4
replies
1.5k
views
Newbee question: how to output/write data (measureents) to a text file?
packages
8.4 years ago Reinert Korsnes • 0
2
votes
1
reply
2.7k
views
Installation of bioConductor packages
installation packages bioconductor all
updated 8.5 years ago by 25k • written 8.5 years ago by • 0
2
votes
4
replies
2.4k
views
Package RnBeads not available for R 3.1.2?
RnBeads packages R 3.1.2
8.8 years ago bmreilly • 0
0
votes
0
replies
1.6k
views
what R package prediction secondary structure for amino acids
packages
9.1 years ago m016648 • 0
2
votes
7
replies
1.3k
views
Is there a way to find corresponding svn revision for the current /devel/src/contrib/PACKAGES and /release?
svn PACKAGES
updated 9.2 years ago by ★ 8.2k • written 9.2 years ago by • 0
50 results • Page 1 of 1
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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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