Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
docker
•
reset
3
votes
9
replies
2.3k
views
Bioconductor docker tags and release versions
docker
release
9.0 years ago • updated 8.6 years ago
Karl Forner
▴ 70
1
vote
3
replies
1.5k
views
confused about bioconductor/release_microarray:3.2 tag
docker
microarray
8.5 years ago • updated 8.4 years ago
Karl Forner
▴ 70
3
votes
6
replies
2.1k
views
Bioconductor Docker Development container
docker
bioc-devel
updated 9.0 years ago by
Dan Tenenbaum
★ 8.2k • written 9.0 years ago by
Nathan Sheffield
▴ 10
5
votes
4
replies
2.7k
views
XVector installation fails because zlib.h is not found
XVector
docker
Install
2.5 years ago
RobKo
▴ 10
2
votes
2
replies
1.0k
views
docker image with VariantAnnotation package?
docker
updated 3.9 years ago by
Martin Morgan
25k • written 3.9 years ago by
Paul Shannon
▴ 470
0
votes
1
reply
1.9k
views
Install using BiocManager::install() doesn't work in docker container
Bioconductor
docker
Install
updated 3.4 years ago by
Martin Morgan
25k • written 3.4 years ago by
Khai-Chuong
• 0
1
vote
7
replies
5.1k
views
Installing Bioconductor packages in Docker
Bioconductor
DOCKER
RShiny
updated 21 months ago by
Sam
▴ 10 • written 3.3 years ago by
adklts
• 0
2
votes
3
replies
1.6k
views
How to use a specific Bioconductor version in custom Dockerfile
singularity
ensemblVEP
docker
17 months ago
jtaylor-predicine
• 0
3
votes
7
replies
1.9k
views
Installing densvis on a Singularity container
densvis
docker
updated 11 months ago by
alan.ocallaghan
▴ 160 • written 12 months ago by
James W. MacDonald
65k
3
votes
3
replies
3.0k
views
best way to terminate a Docker-based bioconductor/RStudio session?
docker
updated 8.7 years ago by
Dan Tenenbaum
★ 8.2k • written 8.7 years ago by
anton.kratz
▴ 60
0
votes
2
replies
1.1k
views
does bioconductor/bioconductor_docker:RELEASE_X_Y install CRAN packages from a fixed snapshot?
mran
docker
cran
updated 2.3 years ago by
James W. MacDonald
65k • written 2.3 years ago by
mk
▴ 20
0
votes
2
replies
562
views
Docker usage with Trio Bioconductor Package
VariantAnnotation
docker
trio
updated 12 months ago by
ATpoint
★ 4.1k • written 12 months ago by
sethberke
• 0
0
votes
1
reply
1.5k
views
apt-get problems with latest bioconductor/release_core docker
docker
7.5 years ago • updated 7.4 years ago
Karl Forner
▴ 70
4
votes
2
replies
5.6k
views
how can I install packages in docker/R/bioconductor so that they persist?
docker
8.5 years ago
anton.kratz
▴ 60
1
vote
1
reply
2.0k
views
Job:
junior level position in proteomics/data science
proteomics
machine learning
git
docker
Job
updated 6.4 years ago by
karimse07
• 0 • written 6.6 years ago by
petyuk
▴ 70
1
vote
4
replies
2.5k
views
Bioconductor docker images without Rstudio-server?
docker
updated 7.9 years ago by
Dan Tenenbaum
★ 8.2k • written 8.4 years ago by
Thomas Sandmann
▴ 90
6
votes
9
replies
2.3k
views
Install Bioconductor 3.7
docker
BiocManager
BiocVersion
updated 5.0 years ago by
Martin Morgan
25k • written 5.0 years ago by
Michael Steinbaugh
▴ 90
0
votes
1
reply
1.4k
views
Error installing flowDensity on latest docker container
R
package installation
docker
updated 6.5 years ago by
shepherl
3.9k • written 6.5 years ago by
bbrink
• 0
5
votes
2
replies
2.4k
views
how can I access my local files (data, R-scripts) from the *docker* R/Bioconductor?
docker
ubuntu
updated 8.7 years ago by
Dan Tenenbaum
★ 8.2k • written 8.7 years ago by
anton.kratz
▴ 60
3
votes
1
reply
1.1k
views
Docker container with bioconductor and devtools
docker
updated 4.6 years ago by
shepherl
3.9k • written 4.6 years ago by
raven
• 0
0
votes
1
reply
1.1k
views
News:
New Package and New Docker Image Submission Deadline for Bioc Release 3.11
release
package submission
docker
deadline
News
4.2 years ago • updated 4.1 years ago
shepherl
3.9k
2
votes
0
replies
1.0k
views
News:
Bioconductor Dockers Updated
bioconductor
docker
News
7.0 years ago
shepherl
3.9k
1
vote
4
replies
1.9k
views
how to install Rsamtools in bioconductor/devel_base docker
docker
Rsamtools
8.8 years ago
Ou, Jianhong
★ 1.3k
2
votes
4
replies
1.8k
views
no date tag included in docker ps output
docker
reproducibility
8.7 years ago
anton.kratz
▴ 60
1
vote
10
replies
2.7k
views
Building mzR package under docker fails
mzR
docker
debian
centos
rocker
8.6 years ago
mjmg
• 0
7
votes
0
replies
3.7k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
8.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.1k
views
AnnotationData Packages version and pipeline management
docker
annotation
pipeline
8.0 years ago
Elena Grassi
▴ 10
0
votes
1
reply
1.4k
views
bioconductor/release_core:20160630 - BiocInstaller version 3.2 is too old for R version 3.3.1
docker
bioconductor
7.9 years ago
Karl Forner
▴ 70
0
votes
10
replies
2.0k
views
Ability to use a particular package via Docker
Docker
flowcore
dockerfile
7.7 years ago
jordan.xanthopoulos
• 0
3
votes
0
replies
1.3k
views
News:
Updates to Bioconductor Dockers
docker
bioconductor
News
7.2 years ago
shepherl
3.9k
7
votes
0
replies
2.0k
views
News:
Announcing Docker containers for Bioconductor
docker
News
9.4 years ago
Dan Tenenbaum
★ 8.2k
0
votes
0
replies
1.3k
views
News:
Dockers have been updated for Bioc3.6 and Bioc3.7
docker
bioconductor
release
devel
News
6.5 years ago
shepherl
3.9k
0
votes
0
replies
872
views
Job:
Research Associate in Genomics Pipelines @ UEA, Norwich, UK
pipelines
NGS
Research associate
Docker
Job
4.8 years ago
Daniel Brewer
▴ 100
0
votes
5
replies
1.9k
views
How to add a BioConductor package to a Docker image based on rocker/shiny
docker
20 months ago
Sam
▴ 10
34 results • Page
1 of 1
Recent ...
Replies
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
JKim
• 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Awards
• All
Popular Question
to
Vincent J. Carey, Jr.
6.7k
Popular Question
to
Koen Van den Berge
▴ 180
Popular Question
to
shepherl
3.9k
Popular Question
to
Ken C
• 0
Popular Question
to
Johannes Rainer
★ 2.0k
Locations
• All
Hong Kong,
just now
Hong Kong,
just now
Poland,
30 minutes ago
Greece,
41 minutes ago
WEHI, Melbourne, Australia,
1 hour ago
Traffic: 449 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6