Showing : heatmaps • reset
2
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5
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1.2k
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Heatmap of rnaseq data with z-score scale
heatmaps RNASeq
updated 3 months ago by ▴ 110 • written 3 months ago by ▴ 10
1
vote
5
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1.2k
views
Heatmap of a transformed deseq object with pheatmap
DESeq2 heatmaps
updated 3 months ago by 68k • written 3 months ago by ▴ 10
0
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2
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853
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DESeq2 Heatmap
heatmaps
updated 7 months ago by ★ 1.4k • written 7 months ago by • 0
0
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3
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1.5k
views
Label specific rows in pheatmap
heatmaps pheatmap
updated 10 months ago by 68k • written 10 months ago by ▴ 50
1
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5
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2.1k
views
Heatmap from the output of GSEA clusterProfiler?
clusterProfiler heatmaps
written 12 months ago by • 0
2
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1
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1.5k
views
DESeq2 is it OK to scale transformed data in order to plot heatmaps?
DESeq2 heatmaps
updated 12 months ago by ★ 4.9k • written 13 months ago by • 0
0
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0
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426
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Error in drawHeatmap function
GeneOverlap heatmaps
15 months ago • updated 14 months ago Johanna • 0
0
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2
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1.2k
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Cluster columns in Pheatmap
geneexp pheatmap heatmaps cluster
updated 15 months ago by 68k • written 15 months ago by • 0
0
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1
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2.5k
views
Error when trying to create a heatmap with DESeq2
Heatmap RNA-seqanalysis heatmaps DESeq2
updated 22 months ago by ▴ 780 • written 22 months ago by • 0
0
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1
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2.6k
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edgeR heatmap construction and interpretation
heatmaps
updated 22 months ago by 52k • written 22 months ago by • 0
0
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3
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1.3k
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Installing Gpart
gpart heat heatmaps
updated 23 months ago by 68k • written 23 months ago by • 0
0
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2
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1.2k
views
Drawing a heatmap with only limited genes
heatmaps
updated 2.2 years ago by • 0 • written 2.2 years ago by • 0
1
vote
1
reply
870
views
Add 'ColSideColors' using 'heatmap.2' function
ColSideColors heatmaps heatmap.2
updated 2.4 years ago by ▴ 90 • written 2.5 years ago by ▴ 10
0
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1
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1.1k
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Heatmap of two conditions from the normalized gene count data
GeneExpression heatmaps
updated 2.5 years ago by ★ 4.9k • written 2.5 years ago by • 0
0
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2
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1.7k
views
How to use the plotExprHeatmap function to draw heat maps according to groups
grou heatmaps CyTOFpower cytofWorkflow
2.5 years ago shuangshuang • 0
0
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0
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1.5k
views
WGCNA Heatmap and Export to Cytoscape Not Working
Cytoscape Heatmap heatmaps WGCNA
2.6 years ago gianni.drm • 0
0
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1
reply
1.2k
views
struggling to create a heatmap
DESeq2 heatmaps
updated 2.6 years ago by ★ 4.9k • written 2.6 years ago by ▴ 10
2
votes
3
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1.9k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 2.6 years ago by ▴ 40 • written 2.6 years ago by ▴ 10
2
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2
replies
1.1k
views
[DESeq2] There is no difference in expression in my heatmap
DESeq2 heatmaps
2.6 years ago Sooni ▴ 10
4
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5
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6.3k
views
How to identify top most variable genes from log2 normalized data?
supervised edgeR variance RNASeq heatmaps
updated 2.6 years ago by 52k • written 2.7 years ago by ▴ 10
2
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5
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2.6k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
2.7 years ago Katharina • 0
0
votes
1
reply
4.2k
views
Heatmap with result DESeq analysis
DESeq2 results Heatmaps plots
updated 2.9 years ago by 43k • written 2.9 years ago by • 0
0
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3
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2.2k
views
Generate Heatmap from Gene Names after DESEQ2
DESeq2 DESEQ2 tximeta SummarizedExperiment heatmaps
updated 3.0 years ago by 68k • written 3.0 years ago by • 0
0
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1
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2.4k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 3.0 years ago by ▴ 290 • written 3.0 years ago by • 0
1
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1
reply
1.5k
views
How fix lines of dendrogram that overlap in the column portion of a heatmap?
heat heatmaps
updated 3.2 years ago by 68k • written 3.2 years ago by • 0
0
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2
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8.1k
views
Scaling for p.heatmap
heatmaps pheatmap scaling
3.2 years ago Bhavana • 0
0
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3
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2.0k
views
Persisting error in making a heatmap
heatmaps gplots
3.2 years ago beslinail • 0
1
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1
reply
1.2k
views
Method for generating heatmap of overlapping DEGs?
heatm heatmaps
updated 3.4 years ago by 68k • written 3.4 years ago by • 0
0
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1
reply
1.6k
views
Help me do a gene enrichment analysis
DESeq2 topGO heatmaps
updated 4.0 years ago by ▴ 40 • written 4.0 years ago by • 0
0
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2
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2.3k
views
PCA and heatmaps: most variable genes selection
DESeq2 ExpressionData heatmaps pca
4.2 years ago Clara ▴ 10
0
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1
reply
3.4k
views
Can you colour dendrogram branch clusters in pheatmap?
R heatmaps pheatmap
updated 4.5 years ago by ★ 4.0k • written 4.5 years ago by ▴ 10
1
vote
1
reply
1.2k
views
PCA rand heatmap of raw data
DESeq2 DiffSeq PrincipalComponent rlog heatmaps
updated 4.5 years ago by 43k • written 4.5 years ago by ▴ 30
4
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5
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2.0k
views
DEseq2 results
heatmaps DEGs PCA
updated 4.5 years ago by ★ 4.0k • written 4.5 years ago by • 0
0
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0
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999
views
How to generate input file for Bioconductor package heatmaps
heatmaps input file
updated 6.5 years ago by 68k • written 6.5 years ago by ▴ 10
34 results • Page 1 of 1
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Comment: org.Ss.eg.db MAMDC4 maps to incorrect UNIPROT key by thundernight • 0
I'm actually having the same problem. [Spanish dictionary][1] [1]: https://spanishdictionary.cc
Comment: voomLmFit fitted log-CPM values by Gordon Smyth 52k
The fitted values are on the log2CPM scale. I would have told you if they were not! I think you may be getting confused by the differences…
Comment: voomLmFit fitted log-CPM values by Lina ▴ 10
Is the output from fitted(v) in the log2 CPM scale? or CPM scale?
Answer: voomLmFit fitted log-CPM values by Gordon Smyth 52k
Fitted values are obtained from limma MArrayLM objects by ``` fitted(v) ```
Comment: EuroBioC2024 abstract submission is open! by Finnianfly • 0
What specific requirements should be noted when preparing abstracts for presentation formats such as short talks, package demos, or posters…
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Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
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