Showing : software • reset
0
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7
replies
689
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News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
9 weeks ago • updated 9 days ago shepherl 3.9k
1
vote
8
replies
1.5k
views
News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.1 years ago by 3.9k
0
votes
8
replies
2.2k
views
How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation software software error
updated 7.9 years ago by ★ 4.3k • written 7.9 years ago by ▴ 10
0
votes
3
replies
1.0k
views
News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.0 years ago by ▴ 160 • written 4.1 years ago by 3.9k
0
votes
5
replies
1.3k
views
News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
2.6 years ago • updated 2.0 years ago shepherl 3.9k
1
vote
2
replies
1.4k
views
News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
3.6 years ago • updated 3.5 years ago shepherl 3.9k
0
votes
2
replies
1.6k
views
News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
4.6 years ago • updated 4.5 years ago shepherl 3.9k
2
votes
2
replies
1.5k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
3.4 years ago • updated 3.0 years ago shepherl 3.9k
2
votes
3
replies
2.8k
views
package for sex determination using sam/bam files
software sex package
8.6 years ago Pau Marc Muñoz Torres ▴ 20
2
votes
4
replies
1.2k
views
Bioconductor package development
package R software development
updated 3.6 years ago by 25k • written 3.6 years ago by • 0
0
votes
1
reply
258
views
News: Bioconductor 3.19 Release Schedule
Release release Software
8 weeks ago • updated 5 weeks ago shepherl 3.9k
1
vote
3
replies
1.6k
views
Are there any bioconductor github mirrors for data packages?
software bioc-devel developers R
updated 8.5 years ago by ★ 8.2k • written 8.5 years ago by • 0
3
votes
6
replies
1.1k
views
News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 13 months ago by • 0 • written 14 months ago by 3.9k
2
votes
1
reply
1.0k
views
Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 7 months ago by ★ 4.1k • written 7 months ago by ▴ 10
1
vote
1
reply
1.1k
views
How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 4.4 years ago by ▴ 10 • written 4.4 years ago by ▴ 40
0
votes
1
reply
1.0k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
4.8 years ago • updated 4.7 years ago shepherl 3.9k
0
votes
2
replies
818
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 3.9 years ago by 65k • written 3.9 years ago by • 0
0
votes
1
reply
1.1k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.3 years ago by 65k • written 5.3 years ago by • 0
0
votes
2
replies
793
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 3.7 years ago by 3.9k • written 3.7 years ago by • 0
5
votes
1
reply
435
views
News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 6 months ago by 3.9k
0
votes
1
reply
868
views
News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.0 years ago • updated 4.9 years ago shepherl 3.9k
0
votes
1
reply
412
views
Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 11 months ago by 65k • written 11 months ago by • 0
0
votes
1
reply
855
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.3 years ago shepherl 3.9k
0
votes
0
replies
724
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
19 months ago shepherl 3.9k
8
votes
0
replies
856
views
News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
2.0 years ago • updated 24 months ago shepherl 3.9k
0
votes
0
replies
557
views
News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
13 months ago shepherl 3.9k
0
votes
0
replies
771
views
Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
17 months ago Robert Castelo ★ 3.3k
0
votes
0
replies
419
views
News: Bioconductor 3.18 Release Schedule
Release Software release
8 months ago shepherl 3.9k
1
vote
0
replies
792
views
News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
18 months ago shepherl 3.9k
0
votes
0
replies
1.5k
views
News: The NIH Software Discovery Index | We invite your comments
software NIH index News
9.6 years ago Sean Davis 21k
3
votes
0
replies
41
views
News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
1 day ago shepherl 3.9k
0
votes
0
replies
1.9k
views
Job: Harvard Medical School: Jr. Software Engineer/Biomedical Informatician
software engineer bioinformatician job Job
9.5 years ago Doe, Aimee ▴ 40
0
votes
0
replies
1.1k
views
News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.0 years ago shepherl 3.9k
0
votes
1
reply
1.1k
views
News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
5.3 years ago shepherl 3.9k
0
votes
1
reply
1.2k
views
News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
5.2 years ago shepherl 3.9k
0
votes
3
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.9 years ago shepherl 3.9k
0
votes
0
replies
747
views
Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
4.9 years ago jmaanaki • 0
0
votes
0
replies
850
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.7 years ago • updated 4.6 years ago shepherl 3.9k
2
votes
0
replies
2.3k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
4.6 years ago Laurent Gatto 1.6k
6
votes
0
replies
854
views
News: Bioconductor 3.10 is released!!
release software packages bioconductor News
4.5 years ago shepherl 3.9k
2
votes
2
replies
1.0k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
4.5 years ago shepherl 3.9k
0
votes
0
replies
882
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.5 years ago shepherl 3.9k
0
votes
0
replies
778
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.2 years ago shepherl 3.9k
4
votes
0
replies
815
views
News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.0 years ago shepherl 3.9k
0
votes
0
replies
820
views
News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
3.9 years ago shepherl 3.9k
3
votes
0
replies
1.4k
views
News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
3.7 years ago • updated 3.6 years ago shepherl 3.9k
0
votes
0
replies
1.1k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
3.5 years ago Vincent J. Carey, Jr. 6.7k
4
votes
0
replies
942
views
News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
3.5 years ago shepherl 3.9k
0
votes
0
replies
594
views
News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
12 months ago shepherl 3.9k
8
votes
0
replies
892
views
News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
2.5 years ago shepherl 3.9k
50 results • Page 1 of 1
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Comment: Timecourse RNASeq analysis by Aurora • 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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