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1.9k
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News: BioC2023 abstract submission is now open!
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News: Bioconductor 3.17 Release Schedule
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deseq2 RLE normalization
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2.7 years ago anmolanp ▴ 10
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Does it make sense to have so many statistically significant gene differentially expressed after DESeq2 paired sample analysis?
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2.7 years ago Jitendra ▴ 10
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No BSgenome for Human HG19 or HG38 with R version 4.2.2 and Bioconductor 3.16
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DESeq Normalization and miRNAs Filtering
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Determining a delta G for full metabolic pathway changes
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2.7 years ago chelsea.st.germain • 0
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2.7 years ago Sep • 0
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How to save primers in a local file with openPrimeR
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Reduce the number of nodes appear in the cnetplot of clusterprofiler
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2.7 years ago Layla • 0
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Which software can prune 5 Million SNPs?
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Does the running time of DESeq function is much more longer for design factor containing two variable compare to design factor containing only one v…
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scRNAseq package and cell type annotations
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updated 2.7 years ago by 43k • written 2.7 years ago by • 0
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please resolve the issue
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specifying comparison of interest in the minfi Bumhunter function
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2.7 years ago HELEN • 0
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Does DiffBind make consensus peaks sets for samples from a given condition (e.g. case control)?
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2.7 years ago tahir.msajid • 0
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697
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DiffBind---peak region reads or all reads？
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DEXSeq Subsetting pre or post dispersion calculation?
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2.7 years ago Ben J ▴ 20
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add column with name in R
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46,691 results • Page 58 of 934
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Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
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BTW, I tested with no issue on MacOS ARM on our previous github issue.
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The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
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For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
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