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News:
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written 3.3 years ago by
Maria Doyle
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Maria Doyle
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Maria Doyle
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16 months ago • updated 10 months ago
shepherl
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Gene Set Enrichment Analysis in Bioconductor course
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11 months ago
info
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EuroBioC2024
written 2.0 years ago by
Maria Doyle
▴ 110
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10 months ago
shepherl
4.3k
1
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Introduction to Epigenomics data analysis with R and Bioconductor course (online) - 14th-18th April
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10 months ago
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198
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Course: Single-cell analysis with R/Bioconductor
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5 months ago
Ludwig Geistlinger
▴ 80
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EuroBioC2025: Abstract Submissions Open!
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11 months ago
Maria Doyle
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updated 3 months ago by
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• 0 • written 17 months ago by
Maria Doyle
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10 months ago
shepherl
4.3k
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415
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News:
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684
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News:
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written 4 weeks ago by
Frances Turner
▴ 20
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436
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News:
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written 5 months ago by
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updated 8 months ago by
Ray
• 0 • written 23 months ago by
Maria Doyle
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News:
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laurah ondari
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shepherl
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News:
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
Bioconductor
3 months ago
Maria Doyle
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216
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News:
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written 10 days ago by
laurah ondari
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News:
Announcing a New Journal - Bioinformatics Methods and Applications - Now Open for Submissions
Bioconductor
written 7 months ago by
Wei Shi
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written 5.0 years ago by
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543
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News:
GSEA in R/Bioconductor course
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written 11 months ago by
info
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written 4 weeks ago by
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News:
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written 8 weeks ago by
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435
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News:
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shepherl
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written 3 months ago by
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Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name
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Thanks for the quick reply! If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…
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Hello, I was also wondering about the same issue. Did you figure it out?
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FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…
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This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…
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