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News:
List of Deprecated Packages for Bioc3.18
Deprecation
devel
Bioconductor
Devel
10 months ago • updated 14 days ago
shepherl
3.8k
1
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8
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News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.1 years ago by
shepherl
3.8k
0
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7
replies
680
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News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
8 weeks ago • updated 8 days ago
shepherl
3.8k
0
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4
replies
720
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News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 6 months ago by
Guido Hooiveld
★ 3.9k • written 6 months ago by
shepherl
3.8k
0
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3
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1.2k
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News:
European Bioconductor Conference 2023 planning
Europe
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EuroBioC
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updated 9 days ago by
lauryfriese932
• 0 • written 18 months ago by
Maria Doyle
▴ 70
1
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2
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646
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News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia
BioCAsia
Conferences
Events
BioC
written 18 months ago by
Peter Hickey
▴ 740
0
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2
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864
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News:
List of Deprecated Packages for Bioc3.17
Bioconductor
Deprecation
Devel
devel
12 months ago • updated 11 months ago
shepherl
3.8k
0
votes
2
replies
1.1k
views
News:
Final List of Deprecated Packages for Bioc3.7
deprecate
package
release
News
written 6.1 years ago by
shepherl
3.8k
0
votes
1
reply
256
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
8 weeks ago • updated 5 weeks ago
shepherl
3.8k
5
votes
1
reply
434
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 6 months ago by
shepherl
3.8k
1
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1
reply
706
views
News:
Join the Community Advisory Board -- upcoming elections -- deadline Today
Bioconductor
CAB
bioconductoroversight
community
written 16 months ago by
shepherl
3.8k
3
votes
1
reply
751
views
News:
[Pre-print] Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
biorxiv
spatialLIBD
News
written 4.2 years ago by
Leonardo Collado Torres
★ 1.0k
3
votes
1
reply
307
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News:
Bioconductor.org has a new look!
Bioconductor
Website
written 3 months ago by
shepherl
3.8k
0
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1
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1.5k
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News:
News:Ensembl 110 has been released
ensembldb
biomaRt
updated 9 months ago by
Michael Love
41k • written 9 months ago by
Benjamin
▴ 30
1
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1
reply
1.4k
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News:
Bioinformatics Summer School - July 2019 - UCLouvain (Belgium)
RNAseq
deseq2
proteomics
transcriptomics
workshop
News
written 5.2 years ago by
Laurent Gatto
1.6k
0
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1
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1.2k
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News:
BioC2023 abstract submission is now open!
presentation
BioC2023
Conference
community
Bioconductor
written 14 months ago by
Maria Doyle
▴ 70
1
vote
1
reply
1.0k
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News:
Nominations for Bioconductor 2022 Awards!
Bioc2022
Awards
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Recognition
written 2.1 years ago by
shepherl
3.8k
2
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1
reply
276
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News:
"Edit" button not working
Bioconductor
Website
SupportSite
updated 3 months ago by
Lori
• 0 • written 3 months ago by
shepherl
3.8k
0
votes
1
reply
299
views
News:
BioC2024 abstract submission is open!
BioC2024
Conference
Bioconductor
updated 6 weeks ago by
howell
• 0 • written 10 weeks ago by
Maria Doyle
▴ 70
0
votes
0
replies
459
views
News:
Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
Bioconductor
Community
BioC2023
11 months ago
Maria Doyle
▴ 70
0
votes
0
replies
417
views
News:
Bioconductor 3.18 Release Schedule
Release
Software
release
7 months ago
shepherl
3.8k
0
votes
0
replies
169
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
11 weeks ago
Maria Doyle
▴ 70
0
votes
0
replies
392
views
News:
EMBO|EMBL Conference "AI and Biology"
EMBL
Heidelberg
AI
Conference
5 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
269
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
4 months ago
info
▴ 10
1
vote
0
replies
15
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
5 hours ago
shepherl
3.8k
0
votes
0
replies
351
views
News:
May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor
Awards
Bioc2023
Recognition
11 months ago
shepherl
3.8k
0
votes
0
replies
220
views
News:
Online course - Flow cytometry data analysis with R/Bioconductor
flowDensity
flowCore
3 months ago
info
▴ 10
0
votes
0
replies
479
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News:
course - single-cell RNAseq data analysis with R and Bioconductor
Workshop
scRNAseq
11 months ago
info
▴ 10
0
votes
0
replies
145
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News:
Online course: Mass Spectrometry and Proteomics with R/Bioconductor
MSnbase
8 weeks ago
info
▴ 10
0
votes
0
replies
139
views
News:
Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024
Conference
Bioconductor
5 weeks ago
Maria Doyle
▴ 70
0
votes
0
replies
96
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News:
Course Manipulation of NGS Data for Genomic and Population Genetics Analyses
sequencing
Sequencing
SequencingData
20 days ago
communication
• 0
1
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0
replies
173
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News:
Nominations for Bioconductor Awards 2024!
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Awards
Bioconductor
Bioc204
5 weeks ago
shepherl
3.8k
1
vote
0
replies
203
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News:
Ensembl 111 has been released
Ensembl
biomaRt
3 months ago
Benjamin
▴ 30
0
votes
0
replies
501
views
News:
Nominations for Bioconductor 2023 Awards!
Awards
Bioconductor
Bioc2023
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12 months ago • updated 11 months ago
shepherl
3.8k
0
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0
replies
284
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News:
CRAN downtime
BiocManager
Bioconductor
5 months ago
shepherl
3.8k
0
votes
0
replies
535
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News:
Bioconductor Community Engagement, Outreach, and Diversity Award
Awards
Bioconductor
Bioc2023
Recognition
12 months ago • updated 11 months ago
shepherl
3.8k
0
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0
replies
361
views
News:
COURSE - Developing R/Bioconductor Packages for Genomics
Bioconductor
PackageTypeData
PackageType
6 months ago
info
▴ 10
0
votes
0
replies
94
views
News:
Call for proposals: European CarpentryConnect - 12-14 November 2024, at EMBL Heidelberg
carpentry
conference
23 days ago
Wolfgang Huber
★ 13k
0
votes
0
replies
60
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News:
Interested in the analysis of Spatial Omics data?
tidySpatialExperiment
SpatialExperiment
MoleculeExperiment
8 days ago
info
▴ 10
0
votes
0
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14
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Spam:
Spreading Smiles with Group Greeting Cards!
CARNIVAL
9 months ago
carterethan745
0
2
votes
0
replies
483
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News:
Bioconductor's Transition Away from Twitter/X
Bioconductor
5 months ago
Maria Doyle
▴ 70
0
votes
0
replies
160
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News:
Join BOC Sciences at Drug Discovery Chemistry 2024
DFP
7 weeks ago
cv.jam.zhxf17875
• 0
1
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0
replies
389
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News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
7 months ago
kayla.interdonato
▴ 160
0
votes
0
replies
530
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News:
Bioconductor Long-term Contribution Award
Bioc2023
Bioconductor
Awards
Recognition
12 months ago • updated 11 months ago
shepherl
3.8k
1
vote
0
replies
602
views
News:
News: BioCAsia2023 Abstract Submission & Registration Now Open!
Events
BioCAsia
Conference
8 months ago
Maria Doyle
▴ 70
0
votes
0
replies
81
views
News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
19 days ago
shepherl
3.8k
1
vote
0
replies
267
views
News:
Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
10 weeks ago • updated 8 weeks ago
shepherl
3.8k
0
votes
0
replies
218
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News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
3 months ago
shepherl
3.8k
0
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0
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72
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News:
TIDES USA 2024
flowBeads
14 days ago
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62 results • Page
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Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
• 0
Thank for your response. It is Illumina 450 K. I use this code ```{r } library(IlluminaHumanMethylation450kanno.ilmn12.hg19) annotat…
Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★ 5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Votes
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
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