Showing : DMRcate • reset
0
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Limma Interaction Effect with Covariates
limma DMRcate
2 days ago kitzhu • 0
0
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0
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146
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DMRcate pcutoff setting
EpicV2 DMRcate
6 weeks ago kitzhu • 0
3
votes
12
replies
3.5k
views
How to get DMR for Infinium methylation EPIC v2
ChAMP DMRcate minfi
updated 3 months ago by ▴ 200 • written 12 months ago by ▴ 10
3
votes
2
replies
757
views
limma Intercept vs No-intercept models completely changing DMR results?
limma DMRcate MethylationArray EPICV2
updated 5 months ago by 51k • written 6 months ago by • 0
1
vote
2
replies
1.5k
views
DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, parametric = FALSE, : NA/NaN/Inf in foreign function call (arg 1)"
DMRcate Gviz
updated 7 months ago by ▴ 200 • written 21 months ago by ▴ 10
0
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0
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308
views
DMRcate error need at least two non-NA values to interpolate
DNAMethylation DMRcate
7 months ago Macsue • 0
1
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2
replies
1.6k
views
EPIC array hg38 annotation?
minfi DMRcate
9 months ago mycetes • 0
0
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0
replies
316
views
What is the significance of DMR in DMRcate
DMRcate
9 months ago chuanjiao6 • 0
3
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2
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472
views
Question about DMRcate
DMRcate dmrcate
9 months ago chuanjiao6 • 0
8
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7
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1.8k
views
Why is DMRcate not available for Bioconductor version 3.18?
DMRcate
written 11 months ago by ▴ 30
0
votes
5
replies
897
views
error while running DMRcate
stattistics epicarray Epigenetics DMRcate
updated 13 months ago by 67k • written 13 months ago by ▴ 10
0
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1
reply
975
views
DMR.plot() Error in .local(.Object, ...) : Failed to obtain 'hguid' cookie
DMRcate DMR.plot
updated 13 months ago by 4.1k • written 13 months ago by • 0
3
votes
4
replies
1.3k
views
DMRcate design
Epigenetics EpigeneticsWorkflow DMRcate
14 months ago Jitendra ▴ 10
0
votes
1
reply
750
views
dmrcate needs at least two non-NA values to interpolate
miss DMRcate missMethyl
updated 15 months ago by ▴ 200 • written 15 months ago by • 0
2
votes
6
replies
1.4k
views
cpg.annotate() in DMRcate error
DNAMethylation methylationArrayAnalysis DMRcate MethylationArrayData MethylationArray
updated 19 months ago by ▴ 200 • written 19 months ago by • 0
6
votes
12
replies
2.3k
views
Error when loading DMRcate
DMRcate
21 months ago Bazingastats • 0
0
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0
replies
866
views
DMR.plot "Error: Too many stacks to draw"
DMRcate Gviz GV
21 months ago gilliangoobie • 0
2
votes
6
replies
2.2k
views
DMRcate
DMRcate R DMRcatedata Markdown
21 months ago yr542 • 0
0
votes
0
replies
1.1k
views
How to increase font for gene name and increase arrow size for GVIZ's ( UcscTrack function ) track?
DMRcate Gviz
2.9 years ago Ahdee ▴ 50
0
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1
reply
1.1k
views
Same error that DMRcate Error in if (nsig == 0) { : missing value where TRUE/FALSE needed
DMRcate
updated 3.1 years ago by 67k • written 3.1 years ago by ▴ 30
0
votes
2
replies
1.3k
views
DMRcate: how to compare two comparisons and whether replicate is necessary
DMRcate WGBS biological_replicate
3.2 years ago • updated 3.1 years ago xie186 • 0
0
votes
6
replies
1.5k
views
Find genes in pathways enrichment
dmrcate enrichment analysis epic array goregion missmethyl
updated 3.4 years ago by ▴ 20 • written 4.4 years ago by ▴ 10
1
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2
replies
1.7k
views
DMRcate extractRanges error
DMRcate
3.7 years ago macsue.jacques ▴ 10
0
votes
0
replies
894
views
DMRcate shows incorrect overlapping non-coding RNA genes
DMRcate
4.0 years ago Mike ▴ 10
3
votes
4
replies
1.3k
views
Is it possible to run DMRcate directly with genomic positions instead of probe names?
DMRcate
updated 4.1 years ago by ▴ 200 • written 4.1 years ago by ▴ 10
0
votes
2
replies
939
views
The smoothed Y statistic is far elevated from limma Y statistic, and parameter "betacutoff" never used
dmrcate
4.3 years ago zh9118 • 0
4
votes
9
replies
3.4k
views
DMRcate Error in if (nsig == 0) { : missing value where TRUE/FALSE needed
DMRcate differencial methylation
updated 3.1 years ago by ▴ 30 • written 4.4 years ago by ▴ 10
1
vote
8
replies
2.4k
views
extract CpGs from DMRcate results
dmrcate cpgs results.ranges DMRcate
updated 4.5 years ago by ▴ 200 • written 4.5 years ago by ▴ 40
3
votes
5
replies
1.7k
views
DMRcate: Cpgids in DMR
methylation Epic annotation DMRcate
updated 5.1 years ago by 67k • written 5.1 years ago by ▴ 10
0
votes
3
replies
1.9k
views
Significant DMRs in genes with no single significant CpG using limma
DMRcate
updated 5.3 years ago by ▴ 200 • written 5.3 years ago by • 0
0
votes
2
replies
1.4k
views
cpg.annotate model requirements
DMRcate ChAMP
updated 5.3 years ago by ▴ 290 • written 5.3 years ago by • 0
1
vote
3
replies
1.4k
views
DMRcate liftover to grch38
hg19 liftover matrixeqtl DMRcate
updated 5.5 years ago by 67k • written 5.5 years ago by ▴ 10
2
votes
18
replies
5.6k
views
DMRcate results cg ID of significant DMR
dmrcate
updated 6.4 years ago by • 0 • written 8.5 years ago by ▴ 160
0
votes
3
replies
1.9k
views
DMRcate package :How to find the gene associated with coordinate
dmrcate gene symbol coordinate
6.4 years ago 574233829 • 0
2
votes
6
replies
2.2k
views
Bumphunting for longitudinal data
bumphunter minfi lmer dmrcate dmr analysis
updated 6.5 years ago by ▴ 200 • written 6.5 years ago by • 0
0
votes
3
replies
2.1k
views
error in champ.DMR using DMRcate (v2.8.3)
champ dmrcate IlluminaHumanMethylationEPICanno.ilm10b2.hg19
updated 7.4 years ago by ▴ 90 • written 7.4 years ago by • 0
1
vote
2
replies
1.8k
views
DMRcate results file ordered by genomic location and not Stouffer p-val?
DMRcate dmrcate methylation
updated 7.5 years ago by ▴ 200 • written 7.5 years ago by • 0
1
vote
3
replies
1.7k
views
coef in dmrcate
dmrcate bumphunter methylation epic
updated 7.6 years ago by 67k • written 7.6 years ago by ▴ 10
0
votes
11
replies
4.5k
views
bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype arguments
DMRcate minfi
updated 9 months ago by ▴ 200 • written 7.7 years ago by ★ 2.0k
1
vote
10
replies
3.4k
views
minfi, lumi, methylumi, DMRcate installation error
minfi lumi methylumi dmrcate illuminahumanmethylation450kanno.ilmn12.hg19
updated 7.7 years ago by ▴ 200 • written 7.7 years ago by ▴ 10
0
votes
1
reply
1.7k
views
DMRcate: Scaling factor for bandwidth
dmrcate dmr analysis dmr
updated 7.8 years ago by ▴ 200 • written 7.8 years ago by ▴ 10
0
votes
2
replies
1.6k
views
DMRcate DMR.plot Turn Off Group Means
dmrcate visualization
updated 7.8 years ago by ▴ 200 • written 7.8 years ago by • 0
1
vote
2
replies
1.3k
views
DMRcate error in extractCoords function
software error DMRcate extractRanges
updated 7.8 years ago by ▴ 200 • written 7.8 years ago by ▴ 10
0
votes
1
reply
1.1k
views
Betacutoff is not used in dmrcate function.
DMRcate
updated 7.9 years ago by ▴ 200 • written 7.9 years ago by • 0
0
votes
9
replies
20k
views
dmrcate(): Error in `$<-.data.frame`(`*tmp*`, "sig", value = logical(0)) : replacement has 0 rows, data has 1963
dmrcate
updated 7.9 years ago by ▴ 200 • written 8.1 years ago by • 0
1
vote
15
replies
2.6k
views
DMRcate results meanpvals
dmrcate
updated 8.4 years ago by ▴ 200 • written 8.4 years ago by ▴ 160
0
votes
1
reply
1.1k
views
conflicts in chromosome number
DMRcate
updated 8.4 years ago by ▴ 200 • written 8.4 years ago by • 0
2
votes
2
replies
1.9k
views
DMRcate error: object 'annotated' not found
dmrcate error
updated 8.9 years ago by ▴ 200 • written 8.9 years ago by • 0
0
votes
5
replies
2.5k
views
DMRcate cpg.annotate error: "Error in data.frame"
dmrcate
9.0 years ago par.larsson • 0
2
votes
2
replies
2.7k
views
DMRcate cpg.annotate error
dmrcate design matrix
updated 9.0 years ago by ▴ 200 • written 9.0 years ago by ▴ 160
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Answer: Unlocking Potential: NURS FPX Strategies and Insights by efsane_kral2000 • 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
Comment: Unlocking Potential: NURS FPX Strategies and Insights by efsane_kral2000 • 0
https://www.hayalsohbet.net https://www.yerlichat.com https://www.yerlichat.net https://www.mavisim.net https://www.hayalchat.com http…
Comment: Is it recommended to analyze different tissues together when using edgeR by Gordon Smyth 51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data by Melisa Tecik • 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data by James W. MacDonald 67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
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Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Is it recommended to analyze different tissues together when using edgeR
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