23 months ago
Mikołaj Mierzejewski
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7
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Appropriate pre-processing pipeline for Human Transcriptome Array HTA 2.0 with oligo for DE analysis
updated 23 months ago by
Yang Shi
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written 7.1 years ago by
svlachavas
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2.9 years ago
jesus
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updated 3.1 years ago by
Guido Hooiveld
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Kevin Blighe
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written 3.2 years ago by
Lara
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1.5k
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updated 3.6 years ago by
Guido Hooiveld
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written 3.6 years ago by
olrema
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5
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updated 4.1 years ago by
James W. MacDonald
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written 4.1 years ago by
svlachavas
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830
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3
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698
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updated 4.4 years ago by
James W. MacDonald
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written 4.4 years ago by
pbachali
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1.3k
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updated 4.4 years ago by
Rise
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written 5.3 years ago by
Guido Hooiveld
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3.9k
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7
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2.0k
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updated 5.0 years ago by
Guido Hooiveld
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written 5.0 years ago by
naf
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updated 5.1 years ago by
Aaron Lun
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written 5.1 years ago by
pratikshasharma47
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updated 5.6 years ago by
Gordon Smyth
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written 5.6 years ago by
CantExitVIM
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5.7 years ago
CantExitVIM
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updated 6.1 years ago by
James W. MacDonald
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written 6.1 years ago by
trhood
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updated 6.6 years ago by
Mike Smith
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updated 6.7 years ago by
James W. MacDonald
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updated 7.2 years ago by
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written 7.2 years ago by
hallie.cla
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7.9 years ago
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updated 8.3 years ago by
Matthew McCall
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830
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updated 8.4 years ago by
Henrik Bengtsson
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written 8.4 years ago by
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updated 8.4 years ago by
James W. MacDonald
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written 8.4 years ago by
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updated 8.4 years ago by
James W. MacDonald
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written 8.4 years ago by
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8.4 years ago
KB
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1.3k
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queso012
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0
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0
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983
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4
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2.2k
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updated 9.0 years ago by
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written 9.0 years ago by
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6
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2
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updated 9.2 years ago by
Wolfgang Huber
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written 9.2 years ago by
svlachavas
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830
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1.0k
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updated 9.2 years ago by
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written 9.2 years ago by
svlachavas
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830
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0
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6
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5
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1.8k
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updated 9.3 years ago by
Gordon Smyth
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written 9.3 years ago by
Paulo Nuin
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200
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updated 9.3 years ago by
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15
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updated 9.6 years ago by
Gordon Smyth
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written 9.6 years ago by
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Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
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Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please.
```
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I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance.
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The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb.
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It's typical that results are presented with each group having its own FDR control.
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These two datasets are from completely different experiments / batches. It is utterly meaningless to compare them. I would suggest comparat…
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