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Feature Counts -R XS Read Assignment Tag
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Could SGSeq utilizes "ts" tag produced from minimap2 other than "XS" tag?
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11 weeks ago jk • 0
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lfcSE
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11 weeks ago Gordon • 0
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12 weeks ago thomas.heigl.ibk • 0
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How to select cells that represents more accurately a cluster in a scRNA-seq dataset?
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Comparing the effects of a condition over time in two seperate tissues
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12 weeks ago Dillon • 0
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Installation problem of rtracklayer on Bioconductor version 3.19
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problems updating package
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12 weeks ago michael.shapiro • 0
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how to solve this error?
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FCS3.2 reading
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3 months ago Olena • 0
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3 months ago mat149 ▴ 70
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GDC slides download
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"Counts" in enrichGO
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502 error biomaRt getLDS()
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3 months ago mata • 0
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5
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3 months ago Max Bone • 0
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Sample-specific methylation values using QSEA
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3 months ago mikat • 0
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RSubread cellCounts - memory mapping error with NovoSeq but not NextSeq output
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Postdoc
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3 months ago sameerahmadguru • 0
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3 months ago Tobias • 0
1
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1
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updated 3 months ago by ▴ 160 • written 3 months ago by ★ 1.5k
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3 months ago hayleyw • 0
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3 months ago Basti ▴ 780
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3 months ago isaromero8888 • 0
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1,000 results • Page 3 of 20
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Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 66k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat by James W. MacDonald 66k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 66k
In that case, probably easiest to subset to the groups being compared.
Comment: Help with ENmix readidat by minardsmitha ▴ 10
Did you figure this out? I have the same issue.
Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720
Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …
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Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
Comment: DESeq2- Mysterious interaction suppresses DEGs
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