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News: Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release devel bioconductor News
5.7 years ago shepherl 4.2k
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News: Bioconductor Release 3.10 Code Freeze Deadline
release deadline bioconductor News
5.7 years ago shepherl 4.2k
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News: Bioconductor 3.11 db0s are available
annotation db0 news release News
5.7 years ago kayla.interdonato ▴ 160
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News: Importing alevin inferential replicates into R with tximport
tximport News
5.7 years ago Michael Love 43k
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News: Bioconductor Release 3.11 Schedule Posted
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5.7 years ago shepherl 4.2k
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News: BioC2019 Code of Conduct violation response
bioc2019 News
updated 5.7 years ago by 25k • written 5.7 years ago by ★ 1.1k
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News: [rOpenSci] Community Call: Maintaining an R Package
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5.7 years ago Leonardo Collado Torres ★ 1.1k
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News: [CDSB] Workshop 2020: Building workflows with RStudio and Bioconductor for single cell RNA-seq analysis
CDSB Mexico Workshop News
5.7 years ago Leonardo Collado Torres ★ 1.1k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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5.7 years ago shepherl 4.2k
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News: Bioc2020 - Deadline for workshops/talk/poster TOMORROW
bioc2020 event conference bioconductor News
5.7 years ago shepherl 4.2k
2
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News: [CDSB] From Bioconductor users to developers: our first community submission
CDSB News
5.7 years ago Leonardo Collado Torres ★ 1.1k
3
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News: [Pre-print] Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
biorxiv spatialLIBD News
written 5.7 years ago by ★ 1.1k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.7 years ago shepherl 4.2k
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950
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News: Changes to BioMart in Ensembl release 100 and Ensembl Genomes release 47
biomaRt Ensembl News
5.8 years ago Astrid_Ensembl • 0
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
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5.8 years ago shepherl 4.2k
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921
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News: RNAseq data analysis with R and Bioconductor
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5.8 years ago info ▴ 10
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1.1k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in two weeks!
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5.8 years ago shepherl 4.2k
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1.1k
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News: Bioc2020 - Registration - Call for abstracts for workshops/talks/poster - travel and caregiver scholarships
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5.8 years ago shepherl 4.2k
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News: News: Bioinformatics Summer School - July 2020 - UCLouvain (Belgium)
rnaseq course proteomics transcriptomics scrnaseq News
5.8 years ago Laurent Gatto 1.6k
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News: Bioconductor Community Advisory Board Nominees
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updated 5.8 years ago by 21k • written 5.8 years ago by ▴ 1000
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News: Results: Bioconductor Community Survey
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5.8 years ago Matthew Ritchie ▴ 1000
1
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1.1k
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News: Bioc2020 - Registration Open - Call for abstracts workshops/talks/posters Open
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5.8 years ago shepherl 4.2k
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News: Ensembl 99 has been released and renaming of species
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5.9 years ago Thomas Maurel ▴ 800
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News: Updates to this Bioconductor Support Site
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5.9 years ago shepherl 4.2k
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News: EMBO | EMBL Symposium: The Molecular Basis and Evolution of Sexual Dimorphism
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5.9 years ago EMBL Events • 0
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
5.9 years ago shepherl 4.2k
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News: May Institute Computation and statistics for mass spectrometry and proteomics
conference mass spectrometry proteomics News
5.9 years ago shepherl 4.2k
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1.1k
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News: New BSgenome data packages for bosTau9, rheMac10, danRer11, and galGal6
BSgenome News
6.0 years ago Hervé Pagès 16k
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News: BioC2020: mark your calendars!
conference News
6.0 years ago Levi Waldron ★ 1.1k
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News: EnsDb databases for Ensembl release 98 provide now also transcripts' GC content
annotation ensembldb EnsDb AnnotationHub News
6.0 years ago Johannes Rainer ★ 2.1k
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News: course - Protemics with R and Bioconductor - 17-19 February 2020 in Berlin
Bioconductor R Proteomics News
6.0 years ago info ▴ 10
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News: Single Package Builder for New Package Submissions
new package submission release News
6.0 years ago shepherl 4.2k
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1.2k
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
6.0 years ago shepherl 4.2k
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2
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2.5k
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
6.1 years ago • updated 6.0 years ago shepherl 4.2k
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News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
6.1 years ago shepherl 4.2k
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News: Bioconductor 3.10 is released!!
release software packages bioconductor News
6.1 years ago shepherl 4.2k
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3
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News: European Bioconductor meeting 2019, 9 - 10 December in Brussels, Belgium
conference EuroBioc News
6.2 years ago • updated 6.1 years ago Laurent Gatto 1.6k
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News: Important Deadlines for RELEASE
release devel deadline News
updated 6.1 years ago by 25k • written 6.1 years ago by 4.2k
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News: Bioconductor 3.10 db0s are available
news release annotation db0 deadline News
6.1 years ago kayla.interdonato ▴ 160
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News: Deadline for commits to current Release 3.9 Branch
release deadline News
6.1 years ago shepherl 4.2k
3
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1.4k
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News: Bioconductor Community Survey
feedback community News
6.1 years ago Matthew Ritchie ▴ 1000
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News: Package Submission Deadline is TODAY!!
release new submission package submission deadline News
6.1 years ago shepherl 4.2k
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News: Certificate ERROR resolved
website bioconductor News
6.2 years ago shepherl 4.2k
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1.4k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
6.2 years ago shepherl 4.2k
0
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1.2k
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News: Deadline for commits to current Release 3.9 Branch and Devel 3.10
release freeze deadline devel News
6.2 years ago shepherl 4.2k
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1.4k
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News: Ensembl 98 has been released and renaming of species
biomart ensembl e98 mart News
6.2 years ago Thomas Maurel ▴ 800
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0
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1.1k
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News: Bay area Biotech-Pharma Statistics Workshop, with free R user meetup (Nov 6-8)
cancer meetup News
6.2 years ago Ning Leng • 0
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1.5k
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News: Organizing Committee for BioC2020
conference committee Bioc2020 News
6.2 years ago shepherl 4.2k
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938
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News: Protemics with R and Bioconductor course in Berlin
R Proteomics News
6.2 years ago info ▴ 10
5
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News: Cite Bioconductor packages using Zotero (browser extension)
Zotero News
6.2 years ago Qiang ▴ 80
345 results • Page 2 of 7
Recent ...
Replies
Comment: upstream git branches of bioc-release by TrentonCollier99 • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR by JKim • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release by Jeroen ▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k
I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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