Bioconductor Scater

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beachmat scater

updated 6.3 years ago by galib36 ▴ 10 • written 6.4 years ago by j.xu3 • 0

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3

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1.9k

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sc3 scater scRNAseq

updated 7.2 years ago by Vladimir Kiselev ▴ 150 • written 7.2 years ago by Assa Yeroslaviz ★ 1.5k

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15

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4.0k

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size factor negative scran singlecellexperiment scater

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by Marina V.V. • 0

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8

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2.4k

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sc3 scater

updated 6.4 years ago by Vladimir Kiselev ▴ 150 • written 6.5 years ago by alexandriapinto1 ▴ 10

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7

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6.3k

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biocparallel scater

updated 6.9 years ago by andrew.blake ▴ 40 • written 7.0 years ago by nhejazi • 0

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7

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runUMAP scater Matrix

updated 10 weeks ago by Hervé Pagès 16k • written 6 months ago by inzirio ▴ 10

3

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3

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399

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scater

updated 3 months ago by alan.ocallaghan ▴ 160 • written 3 months ago by Dario Strbenac ★ 1.5k

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scater rnaseq single-cell

updated 6.1 years ago by angela.ubn • 0 • written 7.0 years ago by CodeAway ▴ 70

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software error scater plotRLE

7.0 years ago ian.oslo • 0

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scater SingleCellExperiment

updated 6.6 years ago by davis ▴ 90 • written 6.6 years ago by chriad ▴ 10

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5

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scran SingleCellExperiment scuttle scater

updated 3.3 years ago by Aaron Lun ★ 28k • written 3.3 years ago by enricoferrero ▴ 660

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4

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scran scater scuttle

updated 3.8 years ago by Aaron Lun ★ 28k • written 3.8 years ago by enricoferrero ▴ 660

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16

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2.4k

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scater

updated 7.0 years ago by davis ▴ 90 • written 7.0 years ago by siajunren • 0

5

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2

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5.9k

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singlecellexperiment sc3 scater

updated 6.5 years ago by Vladimir Kiselev ▴ 150 • written 6.5 years ago by chengyuzou ▴ 10

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670

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scater

updated 6.3 years ago by Aaron Lun ★ 28k • written 6.3 years ago by Andrew_McDavid ▴ 270

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scater singlecellexperiment simplesinglecell

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by Xingyu • 0

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scater sce biotype R

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by thebadpenny • 0

5

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2

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1.7k

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splatter singlecellexperiment scater

6.1 years ago luke.zappia ▴ 50

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1

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scater scran umi monocle

updated 6.1 years ago by Aaron Lun ★ 28k • written 6.1 years ago by supremerulersuraj • 0

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3

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scater scran single-cell

updated 5.9 years ago by Martin Morgan 25k • written 6.0 years ago by MengChun Tseng ▴ 10

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1

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995

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scater plotQC scRNAseq

updated 5.8 years ago by Aaron Lun ★ 28k • written 5.8 years ago by Vladimir Krasikov ▴ 90

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6

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scater

5.8 years ago mayank.geit89 • 0

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5

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singlecellexperiment single-cell rnaseq seurat scater

5.6 years ago hamza_karakurt ▴ 50

2

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6

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scater scran scrnaseq clustering

updated 5.5 years ago by Aaron Lun ★ 28k • written 5.5 years ago by shbrief ▴ 20

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2

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scater R biocmanager bioconductor

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by hfberg • 0

3

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5

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scater R singlecellexperiment

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by TJ • 0

2

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1

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1.2k

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scater pca features

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by jws • 0

1

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3

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1.1k

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scater scran singlecellexperiment

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by Abhishek Singh ▴ 20

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1

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2.5k

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scater seurat singlecellexperiment rnaseq

updated 5.4 years ago by Gordon Smyth 50k • written 5.4 years ago by hamza_karakurt ▴ 50

3

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3

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2.7k

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Scater LoomR SCopeloomR

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by Abhishek Singh ▴ 20

7

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5

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1.6k

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scran scater

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by heyao ▴ 30

1

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2

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scran scater normalized counts

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by Radek ▴ 90

2

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2

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1.4k

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scater

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by lileijie1992 • 0

2

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5

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scran scater Rtsne ggplot2 scRNA-Seq

updated 20 months ago by jamie.gearing ▴ 60 • written 5.2 years ago by hamza_karakurt ▴ 50

2

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5

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1.4k

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scater scran igraph scRNA-Seq rots

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by hamza_karakurt ▴ 50

1

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2

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1.4k

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scRNA-Seq clustering scater scran dunn index

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by hamza_karakurt ▴ 50

7

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3

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rpkm scater calcaverage R expression

updated 5.1 years ago by Aaron Lun ★ 28k • written 5.1 years ago by kushshah ▴ 10

4

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5

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1.8k

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SC3 Scater Scran scRNA-Seq Batch Correction

updated 5.1 years ago by Vladimir Kiselev ▴ 150 • written 5.1 years ago by hamza_karakurt ▴ 50

2

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4

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3.6k

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scater scran singlecellexperiment normalize qc

updated 2.1 years ago by Dayme • 0 • written 5.1 years ago by kushshah ▴ 10

2

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3

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1.6k

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scater plotexpression singlecellexperiment plotting

updated 5.1 years ago by Aaron Lun ★ 28k • written 5.1 years ago by kushshah ▴ 10

8

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4

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2.3k

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scater scran scRNA-Seq doubletCells

updated 5.1 years ago by Aaron Lun ★ 28k • written 5.1 years ago by hamza_karakurt ▴ 50

2

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1

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1.2k

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scater BiocSingular DelayedArray

updated 5.0 years ago by Aaron Lun ★ 28k • written 5.0 years ago by kevin.rue ▴ 350

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7

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2.2k

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scater limma scde scran sc3

4.9 years ago Bogdan ▴ 670

1

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4

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1.5k

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scran scater sc3

updated 4.9 years ago by Aaron Lun ★ 28k • written 4.9 years ago by Bogdan ▴ 670

4

votes

4

replies

1.5k

views

scater scran

updated 4.9 years ago by Aaron Lun ★ 28k • written 4.9 years ago by Bogdan ▴ 670

3

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7

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2.0k

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scater scran

updated 4.9 years ago by Aaron Lun ★ 28k • written 4.9 years ago by Bogdan ▴ 670

4

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4

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2.8k

views

limma edgeR simplesingleCell scran scater

updated 4.8 years ago by Aaron Lun ★ 28k • written 4.8 years ago by Bogdan ▴ 670

2

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1

reply

2.0k

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scRNA-Seq scater scran rna-seq MNN

updated 4.6 years ago by Aaron Lun ★ 28k • written 4.6 years ago by hamza_karakurt ▴ 50

4

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1

reply

1.2k

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scater

updated 4.6 years ago by Aaron Lun ★ 28k • written 4.6 years ago by moldach ▴ 20

0

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1

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1.0k

views

scater SingleCellExperiment

updated 4.5 years ago by Aaron Lun ★ 28k • written 4.5 years ago by santos22903 • 0