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How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation software software error
updated 7.9 years ago by ★ 4.3k • written 8.0 years ago by ▴ 10
1
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8
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News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.1 years ago by 3.9k
0
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News: List of Deprecated Packages for Bioc3.19
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11 weeks ago • updated 23 days ago shepherl 3.9k
3
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6
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News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 13 months ago by • 0 • written 14 months ago by 3.9k
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5
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News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
2.6 years ago • updated 2.1 years ago shepherl 3.9k
2
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4
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package R software development
updated 3.6 years ago by 25k • written 3.6 years ago by • 0
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3
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.9 years ago shepherl 3.9k
1
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3
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Are there any bioconductor github mirrors for data packages?
software bioc-devel developers R
updated 8.5 years ago by ★ 8.2k • written 8.5 years ago by • 0
2
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3
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package for sex determination using sam/bam files
software sex package
8.6 years ago Pau Marc Muñoz Torres ▴ 20
0
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3
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1.0k
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.0 years ago by ▴ 160 • written 4.1 years ago by 3.9k
0
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2
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809
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What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 3.7 years ago by 3.9k • written 3.8 years ago by • 0
1
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2
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News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
3.6 years ago shepherl 3.9k
2
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2
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1.5k
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News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
3.4 years ago • updated 3.0 years ago shepherl 3.9k
0
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2
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News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
4.6 years ago • updated 4.5 years ago shepherl 3.9k
2
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2
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News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
4.5 years ago shepherl 3.9k
0
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2
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824
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Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 4.0 years ago by 65k • written 4.0 years ago by • 0
2
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1
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1.1k
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Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 8 months ago by ★ 4.1k • written 8 months ago by ▴ 10
0
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1
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1.2k
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Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.3 years ago by 65k • written 5.3 years ago by • 0
1
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1
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1.1k
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How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 4.4 years ago by ▴ 10 • written 4.5 years ago by ▴ 40
0
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1
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866
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.4 years ago shepherl 3.9k
0
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1
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1.2k
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News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
5.2 years ago shepherl 3.9k
0
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1
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292
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News: Bioconductor 3.19 Release Schedule
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10 weeks ago • updated 7 weeks ago shepherl 3.9k
5
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1
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461
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News: Bioconductor 3.18 is Released!
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written 6 months ago by 3.9k
0
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1
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1.1k
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News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
4.8 years ago • updated 4.7 years ago shepherl 3.9k
0
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421
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Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 11 months ago by 65k • written 11 months ago by • 0
0
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1
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876
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News: Initial List of Deprecated Packages Bioc 3.10
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5.0 years ago shepherl 3.9k
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1
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News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
5.4 years ago shepherl 3.9k
4
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130
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News: Bioconductor 3.19 is Released!
Release Bioconductor Packages Software
15 days ago shepherl 3.9k
0
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0
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Job: Harvard Medical School: Jr. Software Engineer/Biomedical Informatician
software engineer bioinformatician job Job
9.5 years ago Doe, Aimee ▴ 40
0
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0
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1.1k
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News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.1 years ago shepherl 3.9k
0
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0
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755
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
4.9 years ago jmaanaki • 0
0
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0
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860
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News: List of Deprecated Packages Bioc 3.10
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4.7 years ago • updated 4.6 years ago shepherl 3.9k
2
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0
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Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
4.6 years ago Laurent Gatto 1.6k
6
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News: Bioconductor 3.10 is released!!
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4.5 years ago shepherl 3.9k
0
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0
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.5 years ago shepherl 3.9k
0
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0
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796
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News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.2 years ago shepherl 3.9k
4
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0
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826
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.1 years ago shepherl 3.9k
0
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0
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838
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News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
3.9 years ago shepherl 3.9k
3
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0
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News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
3.7 years ago • updated 3.6 years ago shepherl 3.9k
0
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0
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1.1k
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Job: R programmer position in genetic epidemiology/bioconductor
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3.6 years ago Vincent J. Carey, Jr. 6.7k
4
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950
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News: Bioconductor 3.12 is Released!
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3.6 years ago shepherl 3.9k
0
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News: Bioconductor 3.17 is Released!
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12 months ago shepherl 3.9k
8
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904
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News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
2.6 years ago • updated 2.5 years ago shepherl 3.9k
0
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0
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629
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
2.1 years ago shepherl 3.9k
0
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0
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865
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Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
2.7 years ago Daniel • 0
5
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News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
3.0 years ago shepherl 3.9k
0
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0
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734
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News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
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19 months ago shepherl 3.9k
8
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0
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879
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News: Bioconductor 3.15 is Released!
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2.1 years ago • updated 2.0 years ago shepherl 3.9k
0
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0
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569
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News: Bioconductor 3.17 Release Schedule
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14 months ago shepherl 3.9k
0
votes
0
replies
793
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Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
18 months ago Robert Castelo ★ 3.3k
50 results • Page 1 of 1
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Comment: Ensembl plants at annotationHub? by Daniele • 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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