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How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation software software error
updated 7.9 years ago by ★ 4.3k • written 8.0 years ago by ▴ 10
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News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
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updated 13 months ago by • 0 • written 14 months ago by 3.9k
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News: Final List of Deprecated Packages for Bioc3.14
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News: List of Deprecated Packages Bioc 3.10
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4.9 years ago shepherl 3.9k
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Are there any bioconductor github mirrors for data packages?
software bioc-devel developers R
updated 8.5 years ago by ★ 8.2k • written 8.5 years ago by • 0
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package for sex determination using sam/bam files
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News: Final List of Deprecated Packages for Bioc3.11
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updated 4.0 years ago by ▴ 160 • written 4.1 years ago by 3.9k
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2
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What is Software, Annotationdata, Experimentdata and workflow category?
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updated 3.7 years ago by 3.9k • written 3.8 years ago by • 0
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News: Final List of Deprecated Packages for Bioc3.12
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3.6 years ago shepherl 3.9k
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News: Final List of Deprecated Packages for Bioc3.13
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3.4 years ago • updated 3.0 years ago shepherl 3.9k
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annotation software TxDb
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Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
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Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.3 years ago by 65k • written 5.3 years ago by • 0
1
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How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
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863
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News: List of Deprecated Packages Bioc 3.11
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News: Bioconductor 3.19 Release Schedule
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News: Bioconductor 3.18 is Released!
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News: List of Deprecated Packages Bioc 3.10
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Generate false reads for testing
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Job: Harvard Medical School: Jr. Software Engineer/Biomedical Informatician
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
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News: List of Deprecated Packages Bioc 3.10
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Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
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News: List of Deprecated Packages for Bioc3.12
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Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
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News: Bioconductor 3.13 is Released!
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Job: Research software engineer at UPF Barcelona
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17 months ago Robert Castelo ★ 3.3k
50 results • Page 1 of 1
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Answer: Store output of matchPWM() by mat149 ▴ 70
hitlist<-lapply(irs, FUN = matchPWM, min.score="90%", with.score=TRUE, pwm = pwm) ot <- endoapply(hitlist, function(x) as(x, "IRanges")) …
Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by alex.pico ▴ 20
Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …
Comment: ChipQC 'names' attribute [9] must be the same length as the vector [2]' by bandconductor • 0
thanks! you have saved me so much time
Comment: Problem finding certain variables when importing a public database GSE73103 by Guido Hooiveld ★ 3.9k
FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k
This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…
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Comment: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: Store output of matchPWM()
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
ChipQC 'names' attribute [9] must be the same length as the vector [2]'
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