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bioclite
•
reset
1
vote
2
replies
1.3k
views
bioclite behaviour with defunct packages
bioclite
10.2 years ago
David.Duffy
▴ 10
0
votes
6
replies
3.2k
views
Problems installing BiocLite on Fedora 23, R 3.2.2
bioclite
gcc
install
fedora
updated 10.2 years ago by
Martin Morgan
25k • written 10.2 years ago by
Knut Hansen
▴ 20
2
votes
10
replies
7.0k
views
Install older specific version from an R package that is on the Bioconductor Repository
Bioconductor
biocLite
R packages
oldversion
10.2 years ago
svlachavas
▴ 840
0
votes
4
replies
3.8k
views
Impossible to use goseq package - problem with geneLenDataBase
goseq
geneLenDataBase
bioclite
rstudio
updated 10.2 years ago by
Martin Morgan
25k • written 10.2 years ago by
amyfm
▴ 10
0
votes
5
replies
2.6k
views
openCyto fails to load
opencyto
bioclite
updated 10.2 years ago by
yang.chen
• 0 • written 10.2 years ago by
pavitrarc
▴ 20
0
votes
4
replies
6.6k
views
Error in biocLite("BiocUpgrade") when trying to update to latest release
biocinstaller
bioclite
updated 10.3 years ago by
Dan Tenenbaum
★ 8.2k • written 10.3 years ago by
Stephanie M. Gogarten
▴ 890
0
votes
1
reply
2.2k
views
Questions regarding removal and following re-installation of a specific R package using a custom library path
package installation
custom library path
biocLite
bioconductor
10.3 years ago
svlachavas
▴ 840
1
vote
2
replies
1.9k
views
how to load edgeR each time I start R?
edger
bioclite
installation
updated 10.5 years ago by
James W. MacDonald
68k • written 10.5 years ago by
lplough
• 0
1
vote
3
replies
1.9k
views
graphite functions missing, installed version is out of date
graphite
bioclite
10.6 years ago
mhlinder
• 0
0
votes
4
replies
2.7k
views
update packages when installing a new package
bioclite
package updates
updated 10.6 years ago by
Dan Tenenbaum
★ 8.2k • written 10.6 years ago by
carol white
▴ 680
0
votes
3
replies
1.9k
views
biocLite on R 3.2.0 stalls then vanishes
software error
bioclite
updated 10.7 years ago by
Dan Tenenbaum
★ 8.2k • written 10.7 years ago by
Will Landau
• 0
0
votes
5
replies
5.1k
views
FactoMineR failed after installing Bioconductor
software error
factomineR
bioclite
updated 10.7 years ago by
Martin Morgan
25k • written 10.7 years ago by
dany_wm44
• 0
4
votes
2
replies
4.3k
views
Cannot load or update GO.db
GO.db
bioclite
10.7 years ago
Steve Pederson
▴ 170
2
votes
2
replies
5.0k
views
Help with installing biocLite.R
biocLite
biocinstaller
10.8 years ago
thomas.mohr
▴ 20
1
vote
2
replies
1.9k
views
error in sourcing biocLite: Error in get(".BioC_version_associated_with_R_version", envir = asNamespace("tools")
bioclite
10.8 years ago
melanie.shook
• 0
2
votes
2
replies
8.5k
views
biocLite() fails to update packages when main library not writable
bioclite
package updates
updated 10.9 years ago by
Dan Tenenbaum
★ 8.2k • written 10.9 years ago by
Jenny Drnevich
★ 2.0k
0
votes
1
reply
2.3k
views
Warning messages with biocLite()
bioclite
11.2 years ago
Robert Baer
▴ 70
6
votes
2
replies
2.3k
views
BiocUpgrade without being promped to confirm
bioclite
biocinstaller
biocupgrade
updated 11.2 years ago by
Dan Tenenbaum
★ 8.2k • written 11.2 years ago by
Simon Coetzee
▴ 50
1
vote
4
replies
1.5k
views
devel version: rtracklayer depends on GenomicRanges 1.19.3 but that's not available
rtracklayer
genomicranges
bioclite
updated 11.2 years ago by
Marc Carlson
★ 7.2k • written 11.2 years ago by
Janet Young
▴ 740
5
votes
4
replies
6.0k
views
Problem using BiocUpgrade
update
bioclite
updated 11.2 years ago by
Dan Tenenbaum
★ 8.2k • written 11.2 years ago by
dianmante
• 0
2
votes
1
reply
1.6k
views
problems in biocLite
biocLite
installation
updated 11.3 years ago by
Martin Morgan
25k • written 11.3 years ago by
sara.m79
• 0
0
votes
1
reply
1.6k
views
Is there a way to revert from usedevel() mode in bioconductor
usedevel
bioclite
updated 11.3 years ago by
Steve Lianoglou
★ 13k • written 11.3 years ago by
skm770
• 0
72 results • Page
2 of 2
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Answer: Are individual-mouse-based statistics possible in CellChat?
by
ATpoint
★ 5.0k
Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/
Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups
by
ATpoint
★ 5.0k
apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Martin Morgan
25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Benjamin
• 0
Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…
Votes
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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