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genomics
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0
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6
replies
6.7k
views
Error in DESeqDataSet(se, design = design, ignoreRank) : all variables in design formula must be columns in colData
deseq2
R
genomics
6.3 years ago
mokunf
• 0
3
votes
5
replies
3.1k
views
Element-wise setdiff when psetdiff fails for GenomicRanges
genomicranges
iranges
genomics
updated 9.3 years ago by
Michael Lawrence
▴ 60 • written 9.3 years ago by
Kipper Fletez-Brant
▴ 150
0
votes
0
replies
2.6k
views
Job:
Postdoc in Population Genomics - UC Davis
bioinformatics
evolution
sequencing
genome analysis
genomics
Job
5.6 years ago
hschmidt
• 0
3
votes
0
replies
2.6k
views
Job:
PhD opportunity in Cambridge (Computational Biology and Data Science)
cancer
deep learning
genomics
Job
computational biology
6.6 years ago • updated 6.5 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
2.4k
views
Job:
Full position as Bioinformatician at ETH Zurich in Personalized Medicine Data Fusion and Method Implementation
bioinformatics
personalized medicine
genomics
Job
9.6 years ago
Daniel Stekhoven
▴ 10
2
votes
0
replies
2.3k
views
Job:
Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics
genomics
transcriptomics
software
Job
4.6 years ago
Laurent Gatto
1.6k
1
vote
0
replies
2.2k
views
Job:
Postdoctoral/Senior Scientist Position in New York City- Mount Sinai School of Medicine
genomics
data integration
job
ngs
computational biology
Job
8.9 years ago
supindab
▴ 10
0
votes
0
replies
2.1k
views
Job:
Abbvie -- Senior Manager/Associate Director, Exploratory Statistics
genomics
genetics
proteomics
rnaseq
microarray
Job
9.2 years ago
Feng Hong
• 0
0
votes
0
replies
2.0k
views
Job:
Post-doc/Senior Scientist in Integrative Genomics: Mount Sinai School of Medicine, New York, NY
postdoc
genomics
Job
bioinformatician
computational biology
8.7 years ago
supindab
▴ 10
0
votes
0
replies
1.9k
views
Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
genomics
NGS
R
genetics
statistics
5.8 years ago • updated 3.4 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.9k
views
Job:
Harvard Medical School- Bioinformatics/Genomics signal processing Intern
genomics
bioinformatics
Job
9.4 years ago
Doe, Aimee
▴ 40
0
votes
0
replies
1.8k
views
Job:
Post-Doctoral Research Fellow - Patient Genomics Data Visualization
visualization
genomics
personalized medicine
systemsbiology
js
Job
9.1 years ago
Hamid Bolouri
▴ 50
1
vote
0
replies
1.8k
views
Job:
PostDoc at Novartis Oncology Basel - Intratumor heterogeneity
cancer
genomics
postdoc
job
Job
8.0 years ago
Kauffmann, Audrey
▴ 60
0
votes
0
replies
1.8k
views
Job:
Variant Curator/ Bioinformatics Scientist
genomics
Job
5.2 years ago
shira.rockowitz
▴ 10
0
votes
0
replies
1.8k
views
Job:
Data scientist/bioinformatician - Paris
Genomics
metabolomics
biostatistics
data integration
Job
8.5 years ago
David Enot
▴ 30
0
votes
0
replies
1.7k
views
Job:
Bioinformatician / NGS Data Analyst (Stark Group, Vienna, Austria)
bioinformatician job
ngs
genomics
Job
9.0 years ago
stark
• 0
0
votes
0
replies
1.7k
views
Job:
Research Scientist in Bioinformatics/Statistical Genomics, Max Planck Institute, Nijmegen, Netherlands
job
rnaseq
rna-seq
genomics
data integration
Job
8.6 years ago
clyde.francks
• 0
2
votes
3
replies
1.7k
views
ggbio tracks() function handling x axis in the wrong way
ggbio
ggplot2
tracks
genomics
plot
7.7 years ago
oswaldo.lorenzo
▴ 10
0
votes
0
replies
1.7k
views
Job:
Research Associate (Postdoctoral) position at the MRC Cancer Unit, University of Cambridge, UK.
job
computational biology
genomics
cancer
systemsbiology
Job
9.5 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
1.7k
views
Job:
Single Cell Cancer Genomics
cancer
single cell
genomics
Job
9.4 years ago
crispin.miller
• 0
0
votes
1
reply
1.6k
views
Job:
Bioinformatics Post-Doc Positions
cancer
BIOINFORMATICS
genomics
RNAseq
miRseq
Job
9.2 years ago
aaron
• 0
1
vote
1
reply
1.6k
views
How to show chromosome position and SNP label at the same time in x axis
ggbio
ggplot2
genomics
plot
7.7 years ago
oswaldo.lorenzo
▴ 10
0
votes
0
replies
1.6k
views
Job:
Calling all Clinical Genomic Scientist
computational biology
genomics
genetics
Python
java
Job
8.9 years ago
careers
• 0
0
votes
0
replies
1.6k
views
Job:
Computational Biologist (Genome Statistical Analyst) position in CRUK Manchester Institute, UK
job
bioinformatics
ngs
genomics
statistics
Job
8.2 years ago
Hui Sun Leong
▴ 10
0
votes
0
replies
1.6k
views
Job:
Associate Scientist - NGS Informatics @ AstraZeneca (Metro Boston, MA)
cancer
translation
ngs
genomics
Job
9.1 years ago
jhjohnsn
• 0
1
vote
0
replies
1.6k
views
Job:
Job Opening: Computational Biologists in Cambridge, MA and NYC
ngs
computational biology
R
genomics
bioinformatics
Job
8.5 years ago
mmartin
▴ 20
0
votes
0
replies
1.5k
views
Job:
Research Scientist in Biostatistics/Bioinformatics
statistics
genetics
genomics
R
Job
7.2 years ago • updated 7.1 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.5k
views
Job:
Postdoctoral Research Associate, Wellcome Trust-MRC Institute of Metabolic Science (Fixed Term)
genetics
job
genomics
postdoc
obesity
Job
7.2 years ago
njc65
• 0
1
vote
0
replies
1.5k
views
Job:
Research Assistant position (Fixed Term -12 months initially - application deadline 9th June) in Machine Learning & Computational Cancer Genomics @ …
cancer
deep learning
genomics
Job
5.0 years ago • updated 4.9 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
1.5k
views
Job:
Come apply for our Epidemiologist, AncestryHealth role
genomics
genetics
design
statistics
scientist
Job
8.9 years ago
careers
• 0
2
votes
0
replies
1.4k
views
Job:
Two year postdoc position at Trento, Laboratory of Neurogenomic Biomarkers, Italy
job
GWAS
genetics
genomics
neuro
Job
7.9 years ago
enridomenici
▴ 10
1
vote
0
replies
1.4k
views
Job:
Bioinformatics Scientist at NEXUS Personalized Health Technologies in Zurich
clinicaldata
translational
genomics
diagnostics
research
Job
7.7 years ago
Daniel Stekhoven
▴ 10
0
votes
0
replies
1.3k
views
Job:
Postdoc in Bioinformatics for Cancer Genomics
cancer
genomics
bioinformatics
machine learning
next-generation sequencing
Job
6.9 years ago
yang4414
• 0
0
votes
0
replies
1.3k
views
Job:
Postdoc and PhD student in Bioinformatics/Biostatistics
NGS
R
statistics
genomics
big data
Job
5.2 years ago • updated 4.4 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.3k
views
Job:
Bioinformatics Postdoc in Functional Evolutionary Genomics, Heidelberg, Germany
rnaseq
genomics
evolution
Job
8.1 years ago
henrik.kaessmann
• 0
1
vote
0
replies
1.3k
views
Job:
Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
computational biology
drug development
genomics
Job
7.0 years ago
mmartin
▴ 20
1
vote
0
replies
1.3k
views
Job:
Computational Biologist position in CRUK Manchester Institute, UK
ngs
prostate cancer
genomics
computational biology
bioinformatician job
Job
6.8 years ago
huisun.leong
▴ 10
0
votes
0
replies
1.3k
views
Job:
Bioinformaticist, Research Programmer
R
genomics
statistics
Job
7.2 years ago
radel
• 0
0
votes
0
replies
1.2k
views
Job:
Research Associate, Computational Biology / Bioinformatics, CRUK-CI, University of Cambridge, UK
bioinformatics
computational biology
chemical biology
genomics
Job
7.5 years ago
sergio.martinezcuesta
▴ 10
0
votes
0
replies
1.2k
views
Job:
Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
genetics
job
biostatistics
genomics
bioinformatics
Job
6.1 years ago
xzhousph
• 0
0
votes
0
replies
1.2k
views
Job:
postdoc 3yrs bioinformatics bacterial population genomics: Wellington, New Zealand
bacteria
evolution
population
genomics
Job
6.8 years ago
una.ren
• 0
0
votes
0
replies
1.2k
views
Job:
Bioinformatician/Bioinformatics Data Analyst, CCRI Vienna, Austria
bioinformatician job
computational biology
cancer
genomics
job
Job
7.6 years ago
Max Kauer
▴ 140
1
vote
1
reply
1.2k
views
News:
Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology
go
ontology
bioinformatics
genomics
News
5.6 years ago
laurent.albou
• 0
3
votes
0
replies
1.2k
views
Job:
Postdoctoral Scientist position at intersection of Single-Cell Cancer Genomics, Data Science and Bioconductor Software Development
job
single-cell
data science
cancer
genomics
Job
5.3 years ago
Stephanie Hicks
▴ 80
0
votes
0
replies
1.2k
views
Job:
Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
job
biostatistics
data science
genomics
Job
5.1 years ago
Patrick Kimes
▴ 10
0
votes
0
replies
1.1k
views
Job:
Postdoctoral Associate - Cancer Computational Biology
cancer
genomics
xenograph
cloud
Job
5.9 years ago
tyler.chukwu
• 0
0
votes
0
replies
1.1k
views
Job:
Postdoctoral Fellow position in Computational/Statistical Epigenomics @ Moffitt Cancer Center, Tampa, FL
genomics
bioinformatics
data science
cancer research
tampa
Job
3.8 years ago
tengmx
• 0
1
vote
0
replies
1.1k
views
Job:
2 Postdoc and 2 PhD positions in Regulatory genomics / Rare disease Gagneur lab, TU Munich
genomics
genetics
machine learning
Job
5.5 years ago
gagneur
▴ 10
0
votes
0
replies
1.1k
views
Job:
R programmer position in genetic epidemiology/bioconductor
genetics
genomics
software
Job
3.5 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.1k
views
Job:
Cancer Genomics Analysis Post
cancer
genomics
Job
9.4 years ago
crispin.miller
• 0
50 results • Page
1 of 1
Recent ...
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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