Showing : org.Hs.eg.db • reset
7
votes
19
replies
17k
views
Can't load package "org.Hs.eg.db"
org.Hs.eg.db
updated 2.8 years ago by • 0 • written 8.6 years ago by ▴ 40
15
votes
9
replies
13k
views
Best way to convert uniprot accessions to entrez gene identifiers in R
org.hs.eg.db uniprot accessions entrez gene identifiers
updated 8.7 years ago by 65k • written 8.7 years ago by ▴ 160
0
votes
1
reply
13k
views
Problem with installation of org.Hs.eg.db
software error org.hs.eg.db
updated 7.5 years ago by ★ 2.0k • written 7.5 years ago by • 0
1
vote
3
replies
12k
views
Converting gene symbol list to Entrez IDs
org.hs.eg.db entrez gene identifiers genesymbols
updated 6.2 years ago by ▴ 70 • written 6.2 years ago by ▴ 10
44
votes
29
replies
11k
views
.onLoad failed in loadNamespace() for 'org.Hs.eg.db'
org.Hs.eg.db pathview
updated 3.0 years ago by ▴ 130 • written 3.0 years ago by ▴ 160
6
votes
15
replies
5.9k
views
Couldn't load org.Hs.eg.db
org.Hs.eg.db
updated 3.0 years ago by • 0 • written 3.0 years ago by ▴ 30
3
votes
2
replies
5.7k
views
error with many packages: "Error : .onLoad failed in loadNamespace() for 'org.Hs.eg.db'"
software error org.hs.eg.db
updated 9.4 years ago by 25k • written 9.4 years ago by • 0
5
votes
2
replies
5.4k
views
org.Hs.eg.db - convert ALIAS to ENTREZID, GENENAME
org.hs.eg.db select
8.6 years ago Brian Smith ▴ 120
3
votes
3
replies
5.0k
views
failing to install the package org.Hs.eg.db in R (version 3.5.2 )
org.Hs.eg.db AnnotationDbi
updated 14 months ago by • 0 • written 5.2 years ago by • 0
5
votes
13
replies
4.1k
views
Getting error
enrichplot clusterProfiler org.Hs.eg.db
updated 2.1 years ago by ▴ 40 • written 2.1 years ago by • 0
11
votes
13
replies
4.0k
views
How to retrieve genomic coordinates for a list of entrezID and their respective gene names
genomic AnnotationHub GenomicRanges org.Hs.eg.db
3.4 years ago • updated 3.2 years ago rohitsatyam102 ▴ 20
0
votes
4
replies
4.0k
views
org.Hs.eg.db - hg38 build?
org.hs.eg.db
updated 7.8 years ago by ▴ 180 • written 7.8 years ago by ▴ 120
2
votes
9
replies
3.9k
views
Unable to calculate in parallel what can be calculated on a for loop
biocparallel foreach org.hs.eg.db gostats
updated 7.4 years ago by 25k • written 7.5 years ago by ▴ 730
0
votes
1
reply
3.7k
views
ERROR: lazy loading failed for package ‘org.Hs.eg.db’
org.hs.eg.db annotationdbi error
updated 9.0 years ago by ★ 8.2k • written 9.0 years ago by • 0
0
votes
4
replies
3.7k
views
Problem with install installation("org.Hs.eg.db") package
org.Mm.eg.db org.Hs.eg.db
3.1 years ago Eslam • 0
3
votes
3
replies
3.6k
views
Correct annotation of DGEList object from edgeR package regarding an RNA-Seq dataset
edger DGEList org.hs.eg.db gene annotation
updated 2.6 years ago by • 0 • written 6.4 years ago by ▴ 830
7
votes
4
replies
3.5k
views
PDCD1 missing from TxDb.Hsapiens.UCSC.hg38.knownGene?
txdb txdb.hsapiens.ucsc.hg19.knowngene txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db annotation
8.0 years ago enricoferrero ▴ 660
0
votes
5
replies
3.0k
views
Ensembl identifiers mapping to Gene Symbol
org.Hs.eg.db
7.8 years ago maedakus ▴ 10
1
vote
3
replies
2.8k
views
Error in installing org.Hs.eg.db
org.Hs.eg.db org.H
2.4 years ago 2041792073 • 0
1
vote
12
replies
2.8k
views
Error: C stack usage when installing Txdb package
txdb.hsapiens.ucsc.hg38.knowngene org.hs.eg.db
updated 6.4 years ago by ★ 3.7k • written 6.4 years ago by ★ 1.1k
2
votes
6
replies
2.8k
views
Error: hgu95av2PFAM is defunct
org.Hs.eg.db
8.8 years ago Aditya ▴ 160
2
votes
2
replies
2.6k
views
mapping gene type or biotype to ENSEMBL ID
ensembldb biomaRt org.Hs.eg.db Annotation
updated 3.3 years ago by ★ 2.0k • written 3.3 years ago by • 0
5
votes
7
replies
2.5k
views
Duplicated ENTREZID gene annotations org.Hs.eg.db
ENTREZID SYMBOL AnnotationDbi org.Hs.eg.db
updated 3.3 years ago by 50k • written 3.3 years ago by • 0
1
vote
1
reply
2.5k
views
Use of org.Hs.eg.db and TxDb.Hsapiens.UCSC.hg19.knownGene
TxDb.Hsapiens.UCSC.hg19.knownGene org.hs.eg.db
updated 7.5 years ago by 6.7k • written 7.5 years ago by • 0
3
votes
3
replies
2.4k
views
Get the latest gene name from Entrez ID
AnnotationDbi org.Hs.eg.db
3.1 years ago sgupt46 • 0
0
votes
3
replies
2.4k
views
.onLoad failed in loadNamespace() for 'org.Hs.eg.db'
org.Hs.eg.db loadNamespace .onLoad dbFileConnect(dbfile)
updated 6.5 years ago by 65k • written 6.5 years ago by • 0
2
votes
2
replies
2.3k
views
Error while installing "org.Hs.eg.db"
org.Hs.eg.db
3.4 years ago sevencds ▴ 10
4
votes
6
replies
2.3k
views
OrgDb (org.Hs.eg.db) missing many EntrezIDs and their Symbols (Compared to Ensembl GRChg8 v103)
AnnotationHub OrganismDbi org.Hs.eg.db
updated 2.1 years ago by 50k • written 2.1 years ago by • 0
4
votes
3
replies
2.3k
views
Gene conversion from SYMBOL to ENTREZ using AnnotationDbi doesn't convert some of the genes
AnnotationDbi org.Hs.eg.db
3.4 years ago Emilia ▴ 30
0
votes
3
replies
2.2k
views
org.Hs.eg.db errors out and stops R (independent of RSQLite v1.0.0 or v0.11.4)
org.Hs.eg.db
updated 9.4 years ago by 6.7k • written 9.4 years ago by • 0
6
votes
4
replies
2.0k
views
org.Hs.eg.db error same ensembl ID in different genes
org.hs.eg.db
updated 6.6 years ago by ▴ 50 • written 6.6 years ago by ▴ 10
1
vote
6
replies
2.0k
views
why org.Hs.egGO2ALLEGS contain genes number difference from GO database?
org.Hs.eg.db org.Hs.egGO2ALLEGS
updated 22 months ago by • 0 • written 4.7 years ago by • 0
4
votes
4
replies
1.9k
views
Annotation with org.Hs.eg.db Genome Build 38
AnnotationDbi org.Hs.eg.db
3.4 years ago Bine ▴ 40
0
votes
5
replies
1.8k
views
enrichGO returning NA
clusterprofiler org.hs.eg.db
updated 6.3 years ago by ★ 1.2k • written 6.3 years ago by • 0
4
votes
3
replies
1.8k
views
Gene-GO-term relationship discrepancy between org.Hs.eg.db and geneontology.org
org.hs.eg.db
updated 5.7 years ago by 65k • written 5.7 years ago by • 0
0
votes
3
replies
1.8k
views
Problem with mapp ensemble protein ids to entrez ids using org.Hs.eg.db
org.Hs.eg.db entrez gene identifiers ensemble
updated 7.2 years ago by 65k • written 7.2 years ago by • 0
2
votes
1
reply
1.7k
views
Ensemble and Entrez disconnected?
ensembl entrez biomart org.hs.eg.db
updated 5.4 years ago by 65k • written 5.4 years ago by • 0
0
votes
4
replies
1.6k
views
Faulty entry in org.Hs.eg.db, a force check perhaps?
org.Hs.eg.db
9.0 years ago Dan Du ▴ 210
0
votes
1
reply
1.6k
views
Error installing org.Hs.eg.db
org.hs.eg.db error
updated 7.0 years ago by 65k • written 7.0 years ago by • 0
0
votes
1
reply
1.6k
views
problem of install packages "org.Hs.eg.db"
org.Hs.eg.db
updated 3.2 years ago by 25k • written 3.2 years ago by • 0
0
votes
1
reply
1.6k
views
org.Hs.eg.db loadNamespace() error
org.hs.eg.db
updated 8.7 years ago by 25k • written 8.7 years ago by • 0
0
votes
1
reply
1.6k
views
Get Gene IDs for a list of Gene Names in R
r bioinformatics org.Hs.eg.db genetics
updated 5.8 years ago by 25k • written 5.8 years ago by • 0
3
votes
6
replies
1.5k
views
error using org.Hs.eg.db package : Error in get(load(file)) :
org.hs.eg.db select
9.0 years ago tina.khajeh • 0
0
votes
1
reply
1.5k
views
topGO: "There are no adj nodes for node"
software error topGO org.hs.eg.db
5.4 years ago natske ▴ 10
4
votes
5
replies
1.5k
views
Getting CDSCHROM values from ENSEMBL/SYMBOL keys using mapIds from TxDb.Hsapiens.UCSC.hg19.knownGene
ensembl cdschrom org.Hs.eg.db AnnotationDbi SingleCellExperiment
updated 5.1 years ago by 65k • written 5.1 years ago by ▴ 10
7
votes
3
replies
1.5k
views
Presence of GO annotations for human mitochondrial genes in org.Hs.eg.db?
org.hs.eg.db gene ontology mitochondria
updated 6.5 years ago by 65k • written 6.5 years ago by ▴ 40
1
vote
2
replies
1.4k
views
PATHVIEW incorrect values being plotted in output
pathview org.Hs.eg.db
3.0 years ago Rodrigo • 0
3
votes
2
replies
1.4k
views
Why does requireNamespace("org.Hs.eg.db") load DBI and RSQLite?
org.hs.eg.db DBI rsqlite
updated 8.0 years ago by 25k • written 8.0 years ago by 50k
0
votes
2
replies
1.4k
views
Missing GenBank accession numbers in the org.Hs.egACCNUM object?
org.hs.eg.db bioconductor
updated 7.2 years ago by 65k • written 7.2 years ago by ▴ 30
4
votes
2
replies
1.4k
views
ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
AnnotationDbi EnsDb.Hsapiens org.Hs.eg.db
updated 3.3 years ago by ★ 2.0k • written 3.3 years ago by • 0
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Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
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Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…
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