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896
views
Can i use protein point mutation text mining as bioinformatic tool
bioconductor
crisprseek
9.6 years ago
krababah
• 0
0
votes
13
replies
3.2k
views
Gage and setp argument
gsea
gage
9.6 years ago
peter.chernek
• 0
2
votes
4
replies
2.2k
views
biomaRt File './ensembl_mart_84/mmusculus_gene_ensembl__translation__main.MYD' not found (Errcode: 13)
biomart
9.6 years ago
Darya Vanichkina
▴ 130
0
votes
1
reply
2.2k
views
Primer-blast with bioconductor packages
primer
blast
updated 9.6 years ago by
Hervé Pagès
16k • written 9.6 years ago by
Vinicius Henrique da Silva
▴ 40
1
vote
3
replies
2.6k
views
WGCNA clustering configuration
clustering
wgcna
microarray
updated 9.6 years ago by
Peter Langfelder
★ 3.0k • written 9.6 years ago by
Lluís Revilla Sancho
▴ 760
0
votes
0
replies
1.3k
views
set gRNA.pattern and install CRISPRseek
crisprseek
9.6 years ago
Julie Zhu
★ 4.3k
0
votes
1
reply
1.1k
views
Error Searching for gRNAs ...
crisprseek
updated 9.6 years ago by
Julie Zhu
★ 4.3k • written 9.6 years ago by
krababah
• 0
1
vote
3
replies
2.3k
views
csaw filterWindows function results in a warning: ("Zero library size detected.")
csaw
updated 9.6 years ago by
Aaron Lun
★ 29k • written 9.6 years ago by
chriad
▴ 10
1
vote
4
replies
2.0k
views
ChIPQC error: Error in generating sample data
ChIPQC
updated 9.6 years ago by
Rory Stark
★ 5.2k • written 9.6 years ago by
meeta.mistry
▴ 30
0
votes
4
replies
1.7k
views
mapToGenome minfi package
minfi
updated 9.6 years ago by
Kasper Daniel Hansen
★ 6.5k • written 9.6 years ago by
Asma rabe
▴ 290
0
votes
2
replies
1.5k
views
Methylation and gene expression data
methylation
geneexpression
updated 9.6 years ago by
arfranco
▴ 130 • written 9.6 years ago by
Asma rabe
▴ 290
1
vote
4
replies
1.3k
views
design matrix for a 2 groups
limma
updated 9.6 years ago by
chris86
▴ 420 • written 9.6 years ago by
AAAbdul
• 0
3
votes
1
reply
1.7k
views
window counts in csaw
csaw
counts
updated 9.6 years ago by
Aaron Lun
★ 29k • written 9.6 years ago by
nobishvarghese
• 0
5
votes
5
replies
3.4k
views
Is this the correct way of doing a paired t-test in limma using contrasts
limma
9.6 years ago
chris86
▴ 420
1
vote
2
replies
1.3k
views
What are the expression value of genes/probes in limma results of topTable
Heatmap
updated 9.6 years ago by
Aaron Lun
★ 29k • written 9.6 years ago by
rkp
• 0
1
vote
2
replies
1.4k
views
rsbml load error on Mac
R
sbml
rsbml
mac os x
9.6 years ago
resuper
▴ 10
0
votes
3
replies
2.1k
views
lumi package impossible to install - xtable library
lumi xtable
9.6 years ago
fournier.berlin
• 0
1
vote
1
reply
1.6k
views
minfi starting from beta values
minfi
9.6 years ago
Asma rabe
▴ 290
0
votes
0
replies
1.1k
views
Error in TSCAN
TSCAN
9.6 years ago
xuyang_dami
• 0
2
votes
6
replies
2.7k
views
Using TCGAbiolinks for exon and oligonucleotide level microarray
tcga
tcgabiolinks
microarray
exons
oligonucleotide
updated 9.6 years ago by
Tiago C. Silva
▴ 270 • written 9.6 years ago by
Fernando
• 0
0
votes
2
replies
4.1k
views
Get the reactions for a organism using KEGGREST
keggrest
9.6 years ago
kjboteroo
• 0
0
votes
2
replies
1.6k
views
BiocInstaller_1.16.5.zip not found when using biocLite("BiocUpgrade")
bioclite
biocupgrade
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
dan.gatti
• 0
1
vote
4
replies
1.9k
views
Issues installing GenomicAlignments
genomicalignments
9.6 years ago
Radhouane Aniba
▴ 240
0
votes
1
reply
1.0k
views
tRanslatome package plots
tRanslatome
updated 9.6 years ago by
toma.tebaldi
• 0 • written 9.6 years ago by
ilyco
• 0
0
votes
1
reply
1.5k
views
Pull request for customProDB package
customProDB
featurerequest
updated 9.6 years ago by
Dan Tenenbaum
★ 8.2k • written 9.6 years ago by
matt.chambers42
▴ 10
1
vote
4
replies
2.0k
views
DESeq2 , model matrix with 4 factors, error: inv(): matrix appears to be singular
deseq2
multiple factor design
model.matrix
updated 9.6 years ago by
Michael Love
43k • written 9.6 years ago by
cdemel
• 0
0
votes
1
reply
2.4k
views
Error in ChIPQC: "Error in if (res >= minval) { : missing value where TRUE/FALSE needed"
chipqc
updated 9.6 years ago by
Rory Stark
★ 5.2k • written 9.8 years ago by
liz.ingsimmons
▴ 140
0
votes
1
reply
1.4k
views
Error in makeOrganismDbFromBiomart call for Heliconius melpomene (Ensembl Metazoa)
OrganismDbi
updated 9.6 years ago by
Valerie Obenchain
★ 6.8k • written 9.6 years ago by
Thomas Sandmann
▴ 90
0
votes
2
replies
1.2k
views
plotZScores error in FourCSeq
fourCseq
9.7 years ago • updated 9.6 years ago
snowhune
• 0
5
votes
10
replies
5.6k
views
Interpretation of results for treat & topTreat functions from limma regarding microarray abalysis
limma
treat
topTreat
microarray
updated 9.6 years ago by
Gordon Smyth
53k • written 9.6 years ago by
svlachavas
▴ 840
0
votes
0
replies
2.0k
views
News:
Workshop: Clinical Bioinformatics as a Service, at ECCB 2016 - register till 29 May
workshop
News
9.7 years ago • updated 9.6 years ago
Wolfgang Huber
★ 13k
2
votes
2
replies
3.7k
views
How is the mean-variance plot calculated?
edaseq
updated 9.6 years ago by
Wolfgang Huber
★ 13k • written 9.6 years ago by
neverstop
• 0
1
vote
3
replies
1.9k
views
How to resolve length bias and get GO/KEGG pathway for "non-standard" species in limma or goseq ?
rna-seq
limma
goseq
updated 9.6 years ago by
Nadia Davidson
▴ 320 • written 9.6 years ago by
CandiceChuDVM
▴ 40
0
votes
1
reply
1.1k
views
[bug] build problem: compiler is
DESeq2
updated 9.6 years ago by
Dan Tenenbaum
★ 8.2k • written 9.6 years ago by
d.lituiev
• 0
0
votes
3
replies
1.5k
views
UcscTrack scan() error
Gviz
updated 9.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.7 years ago by
shuoguo
▴ 10
3
votes
3
replies
1.6k
views
Gviz: Should the add53 parameter react to reverseStrand = TRUE ?
gviz
updated 9.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.9 years ago by
stianlagstad
▴ 90
3
votes
10
replies
2.9k
views
Shifted dashed frame in Gviz boxplot
gviz
boxplot
updated 9.6 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.7 years ago by
enricoferrero
▴ 680
2
votes
1
reply
1.4k
views
Obsolete use of AC_INIT macro
rtracklayer
updated 9.6 years ago by
Michael Lawrence
★ 11k • written 9.6 years ago by
Charles Plessy
▴ 180
3
votes
0
replies
1.9k
views
Job:
PhD Positions in Computational Cancer Research
jobs
bioinformatics
biostatistics
cancer
next-generation sequencing
Job
9.6 years ago
Bernd Fischer
▴ 550
2
votes
1
reply
1.3k
views
Epivisr namespace error
epivizr
updated 9.6 years ago by
Hector Corrada Bravo
▴ 60 • written 9.6 years ago by
ashley.doane
▴ 20
3
votes
1
reply
1.4k
views
shiftApply verbosity (in ChIPQC)
ChIPQC
s4vectors
updated 9.6 years ago by
Thomas Carroll
▴ 420 • written 9.8 years ago by
liz.ingsimmons
▴ 140
0
votes
1
reply
1.1k
views
ChipQC report tables
ChIPQ
updated 9.6 years ago by
Thomas Carroll
▴ 420 • written 9.7 years ago by
ashley.doane
▴ 20
0
votes
1
reply
1.2k
views
biomaRt changed host issues
biomart
updated 9.6 years ago by
James W. MacDonald
68k • written 9.6 years ago by
kylvalda
• 0
0
votes
0
replies
2.0k
views
GOseq tutorial for not supported organisms: am I doing it correctly?
deseq2
goseq
biomart
r
rnaseq
9.6 years ago
CandiceChuDVM
▴ 40
4
votes
3
replies
2.3k
views
Error installing AnnotationHub on Fedora
Annotationhub
curl
httr
fedora
updated 9.6 years ago by
anastazie.d
▴ 30 • written 10.3 years ago by
barashe
▴ 10
1
vote
3
replies
1.4k
views
nice 3D displays for PCA analysis
PCA
updated 8 days ago by
adam80haynes
• 0 • written 9.6 years ago by
Bogdan
▴ 670
0
votes
5
replies
2.5k
views
MetagenomSeq, perform anova or kruskall wallis with three groups ?
metagenomeseq
anova
metagenomics
9.7 years ago • updated 9.6 years ago
David
▴ 860
2
votes
5
replies
11k
views
Difference in Wald and LRT test for two condition RNAseq data.
deseq2
updated 9.6 years ago by
Michael Love
43k • written 9.6 years ago by
unique379
• 0
2
votes
1
reply
3.0k
views
Using Limma to identify any differences between multiple treatment groups (without making pairwise comparisons)
microarray
limma
multiple treatments
lfc
updated 9.6 years ago by
Aaron Lun
★ 29k • written 9.6 years ago by
brionyk9
• 0
2
votes
4
replies
1.2k
views
How to calculate design matrix and conduct moderate t test to find DEGs
limma
updated 9.6 years ago by
chris86
▴ 420 • written 9.6 years ago by
itsjay510
• 0
46,704 results • Page
395 of 935
Recent ...
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Answer: Guitar R package requires update due to dependency GenomicFeatures
by
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★ 4.0k
Greetings, This issue is indeed caused by recent changes in the Bioconductor 3.20+ release cycle. The function makeTxDbFromGFF() was previ…
Answer: ATACseq rudimentary questions
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