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CellCODE estimate cell proportions SPV analysis grouping comparisons faulty
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9.7 years ago christopher.clarskon15 ▴ 20
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GenomicFeatures coordinates UCSC
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9.7 years ago ribioinfo ▴ 100
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updated 9.7 years ago by ★ 1.6k • written 9.7 years ago by ▴ 90
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Job: PostDoc at Novartis Oncology Basel - Intratumor heterogeneity
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9.7 years ago Kauffmann, Audrey ▴ 60
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Contribution of Signature in each sample
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combine different GSE on different GPL
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9.7 years ago wahaha123 • 0
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baySeq pairedData error
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9.7 years ago Fernando • 0
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DESeq2 Dispersion Per Condition
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mapFromTranscripts strand problem
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DiffBind - Error in dba.count() when passing mask or peaks
diffbind
updated 9.7 years ago by • 0 • written 9.9 years ago by • 0
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How can I use RefGene.gtf with DEXSeq
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9.7 years ago julie.sedbon • 0
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3
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2.2k
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updated 9.7 years ago by ▴ 280 • written 9.7 years ago by ▴ 20
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Is there a way to align Hi-C half heatmaps to Gviz track?
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updated 9.7 years ago by ▴ 260 • written 9.7 years ago by ▴ 120
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Unable to retrieve sequences using biomaRt::getsequence()
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BioConductor Package submission
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9.7 years ago thomas.nigel.lawson • 0
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EdgeR - topTags sort up and down?
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9.7 years ago susan klein ▴ 10
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3
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updated 9.7 years ago by 53k • written 9.7 years ago by ▴ 10
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about VCF and BAM files
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9.7 years ago Bogdan ▴ 670
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5
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DESeq2 PCA different from Prcomp PCA
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updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 10
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heatmap2 error key
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updated 9.7 years ago by 68k • written 9.7 years ago by ▴ 90
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Complexheatmap question on sorting columns
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9.7 years ago tmcelrath • 0
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Create list of genes within each GOslim term
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9.7 years ago mirko • 0
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5
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merging issue cytofkit
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updated 9.7 years ago by ▴ 30 • written 9.7 years ago by • 0
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1
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Fitting somatic signatures to alexandrovs's
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updated 9.7 years ago by ★ 1.3k • written 9.7 years ago by • 0
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43
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Find overlap for more than 2 GRanges object simultaneously (reproducible example is updated) ?
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updated 9.7 years ago by 25k • written 9.9 years ago by ▴ 80
0
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1
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1.7k
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'could not find function "R (>= 2.1"' while trying https://bioconductor.org/packages/3.2/bioc, trying https://bioconductor.org/packages/3.1/bioc …
cancer probe microarray
updated 9.7 years ago by 25k • written 9.7 years ago by • 0
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Error in file(file, "rt") : cannot open the connection - Using ExiMir Package
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9.7 years ago 31sharmajittu1991 • 0
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design matrix in GLM
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updated 9.7 years ago by ★ 29k • written 9.7 years ago by • 0
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0
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merging issue cytofkit
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9.7 years ago margherita.coccia • 0
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Functions of DESeq2 package
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updated 9.7 years ago by ★ 13k • written 9.7 years ago by • 0
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Error with Rsamtools
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updated 9.7 years ago by 25k • written 9.7 years ago by • 0
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DESeq2 Design with Multiple Interactions
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updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 10
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biomaRt vingette example returns invalid result
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extractUpstreamSeqs with custom genome, no gene_id shown
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updated 9.7 years ago by 25k • written 9.7 years ago by ▴ 30
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9.7 years ago Marcel Ramos 700
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updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 40
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1.2k
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Error with findOverlapsOfPeaks
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9.7 years ago alex.tamburino • 0
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3
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CHiPpeakAnno GO and/or KEGG results presenting
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9.7 years ago lokapal • 0
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9.7 years ago galib36 ▴ 10
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4
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Difference in differentially expressed genes captured from two sets of same sample
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updated 9.7 years ago by 43k • written 9.7 years ago by • 0
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Job: Bioconductor Core Team: Web / System Administrator
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9.7 years ago Martin Morgan 25k
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Plotting genomic interactions in Gviz
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9.7 years ago enricoferrero ▴ 680
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Error in readCtData
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9.7 years ago lizhensor • 0
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2
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Same or different tools: AnnotationHub and AnnotationDbi?
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updated 9.7 years ago by 25k • written 9.7 years ago by • 0
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Using p.nominal DE genes from limma
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updated 9.7 years ago by ▴ 370 • written 9.7 years ago by ▴ 420
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Fluidigm data analysis - how to get adj p-values for 96 genes
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updated 9.7 years ago by 53k • written 9.7 years ago by • 0
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RNASeq analysis - Test for effect of two variables on one (Genotype)
deseq2 multiple factor design rnaseqdata
updated 9.7 years ago by 43k • written 9.7 years ago by ▴ 80
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34
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how to check which probesets belong to which transcript?
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updated 9.7 years ago by ★ 3.9k • written 9.8 years ago by ▴ 120
10
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updated 9.7 years ago by ▴ 120 • written 9.7 years ago by ▴ 60
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