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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
To me, 100 and 200 kb both look fine.
You want to have blocks smaller than segmentation regions.
Comment: ChAMP installation issue
by
e1271094
•
0
I discovered that the dataset data("probe.features.epicv1") is unavailable. Instead, the dataset data("probe.features.epic") is accessible.…
Comment: ChAMP installation issue
by
e1271094
•
0
I apologise for any inconvenience. I have successfully installed the ChAMP package. However, I am now encountering a new error:
myLoad <- …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
Yes, blockLength=200000, and seg=seg.
I am concerned about the inter-feature distance of features. I generated this plot for various bloc…
Answer: Can I trust the differential expression analysis when the two groups overlap on
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Michael Love
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Can you use `vst` instead of `rlog` and increase to 1000 or 2000 genes?
I'm wondering if there's a way to characterize these 7 samples. …
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