Biostar DESeq2

44

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20

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26k

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rnaseq batch effect deseq2 combat removebatcheffect()

updated 5.2 years ago by adam • 0 • written 5.6 years ago by AB ▴ 100

26

votes

17

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8.2k

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deseq2

6.9 years ago • updated 5.3 years ago Michael Love 33k

26

votes

16

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10k

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tximport deseq2 TPM RPKM rnaseq

updated 3.3 years ago by luxeredias ▴ 10 • written 5.1 years ago by tangming2005 ▴ 170

25

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11

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5.8k

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deseq deseq2 edgeR normalization

updated 5.7 years ago by Simon Anders ★ 3.7k • written 5.7 years ago by Nik Tuzov ▴ 70

23

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22

replies

12k

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deseq2 deseq chipseq

updated 4.1 years ago by k.vitting.seerup ▴ 100 • written 5.9 years ago by tangming2005 ▴ 170

22

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7

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9.1k

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RNAseq deseq2 ercc

updated 4.8 years ago by Simon Anders ★ 3.7k • written 4.8 years ago by mbeckste ▴ 20

21

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14

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26k

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deseq2 lowcount

updated 5 months ago by Michael Love 33k • written 6.4 years ago by aristotele_m ▴ 30

20

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12

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14k

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deseq2

updated 23 months ago by Micheal Stark • 0 • written 4.2 years ago by Michael Love 33k

18

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12

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2.1k

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edgeR deseq2 rna-seq independent filtering

updated 6.1 years ago by Michael Love 33k • written 6.1 years ago by Ryan C. Thompson 7.6k

18

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24

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10k

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deseq2 timecourse

updated 5 months ago by ethicalhackers • 0 • written 6.4 years ago by john ▴ 100

17

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17

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2.8k

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deseq2 differential expression logfoldchange lfcshrink lfcthreshold

updated 8 weeks ago by Michael Love 33k • written 3.1 years ago by emi.sch ▴ 20

16

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9

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4.2k

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diffbind medip-seq edger deseq2

updated 3.7 years ago by Rory Stark ★ 4.0k • written 5.4 years ago by florian.noack ▴ 60

15

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12

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1.2k

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deseq2 ZINB-WaVE single cell RNA-seq differential expression

updated 3.0 years ago by Michael Love 33k • written 3.0 years ago by rory.kirchner ▴ 60

15

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4

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1.5k

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edger limma deseq2 rnaseq

updated 5.1 years ago by Ryan C. Thompson 7.6k • written 5.1 years ago by WouterDeCoster ▴ 130

15

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8

replies

9.3k

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deseq2 deseq

6.7 years ago salahm ▴ 70

14

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7

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3.4k

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limma deseq2 edger rnaseq

updated 3.8 years ago by Gordon Smyth 43k • written 3.8 years ago by Jack • 0

14

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7

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6.3k

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deseq2 ensembl

updated 3.5 years ago by James W. MacDonald 57k • written 3.5 years ago by casey.rimland ▴ 130

13

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19

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7.2k

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DESeq2 linear model model

updated 11 weeks ago by Michael Love 33k • written 6.7 years ago by andrew.j.skelton73 ▴ 340

13

votes

9

replies

16k

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deseq2

updated 6 months ago by Michael Love 33k • written 5.5 years ago by ribioinfo ▴ 90

13

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4

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13k

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deseq2

updated 3.0 years ago by Fuqi Xu ▴ 10 • written 5.6 years ago by raya.fai ▴ 50

13

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32

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1.9k

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NanoString Differential Expressed Genes Analysis DESeq2

updated 8 weeks ago by Michael Love 33k • written 2.0 years ago by lim6432 ▴ 30

13

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16

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3.2k

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edgeR deseq2 ase allele

5.8 years ago trianglescout ▴ 40

13

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4

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22k

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deseq2 edger

updated 5.7 years ago by Gordon Smyth 43k • written 5.7 years ago by tonja.r ▴ 60

13

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10

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2.4k

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edger deseq2

updated 5.7 years ago by Gordon Smyth 43k • written 5.7 years ago by Matarit • 0

13

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3

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18k

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deseq2 r

updated 4.5 years ago by Michael Love 33k • written 4.5 years ago by tombernardryan ▴ 40

12

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11

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2.3k

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bplapply biocparallel deseq2

updated 6.0 years ago by Valerie Obenchain ★ 6.7k • written 6.0 years ago by Lauren ▴ 40

12

votes

6

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2.1k

views

rnaseq deseq2 edger

5.7 years ago martiningi ▴ 40

12

votes

7

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2.7k

views

limma removebatcheffect deseq2

updated 5.2 years ago by Ryan C. Thompson 7.6k • written 5.2 years ago by ompandey • 0

12

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12

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43k

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deseq2

updated 6.3 years ago by Steve Lianoglou 13k • written 6.4 years ago by john ▴ 100

12

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8

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1.0k

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deseq2

updated 4.6 years ago by Michael Love 33k • written 4.6 years ago by Matthew McCall ▴ 830

11

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8

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6.0k

views

WGCNA RNA-Seq DESeq2 voom removebatcheffect()

updated 4.9 years ago by Peter Langfelder ★ 2.6k • written 4.9 years ago by gokce.ouz ▴ 70

11

votes

1

reply

3.5k

views

deseq2 plotpca PCa

updated 3.8 years ago by Michael Love 33k • written 3.8 years ago by lirongrossmann ▴ 60

11

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6

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3.9k

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deseq2 rnaseq statistics

updated 3.8 years ago by James W. MacDonald 57k • written 3.8 years ago by Russ Fraser ▴ 20

11

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17

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12k

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deseq2 annotation granges

written 6.8 years ago by Darya Vanichkina ▴ 120

10

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14

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2.1k

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limma edger deseq deseq2

updated 3.8 years ago by Gordon Smyth 43k • written 3.8 years ago by Nik Tuzov ▴ 70

10

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9

replies

946

views

deseq2

updated 5.3 years ago by Michael Love 33k • written 5.3 years ago by Nik Tuzov ▴ 70

10

votes

1

reply

11k

views

rnaseq deseq2

updated 5.7 years ago by Michael Love 33k • written 5.7 years ago by tony_cybercloud ▴ 20

10

votes

9

replies

8.0k

views

deseq2

6.6 years ago aburkha69 ▴ 30

10

votes

6

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3.0k

views

rnaseq deseq2 edger voom limma

updated 3.8 years ago by Paul Harrison ▴ 90 • written 6.1 years ago by Sean Davis 21k

10

votes

7

replies

6.9k

views

deseq2 lfc coef contrast

updated 4.0 years ago by Michael Love 33k • written 4.0 years ago by Anke Busch • 0

9

votes

6

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1.2k

views

independent filtering edger deseq2

updated 6.0 years ago by Aaron Lun ★ 27k • written 6.0 years ago by Ryan C. Thompson 7.6k

9

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9

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9.0k

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deseq2 deseq rna-seq

6.6 years ago gavrielmatt • 0

9

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10

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1.5k

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deseq2 nanopore

2.2 years ago David Eccles (gringer) ▴ 20

9

votes

17

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708

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deseq2 deseq differential binding analysis

updated 3.6 years ago by Michael Love 33k • written 3.6 years ago by rbronste ▴ 60

9

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8

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7.8k

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deseq2 dnaseq

updated 6.9 years ago by Michael Love 33k • written 6.9 years ago by hughes.drew ▴ 100

9

votes

1

reply

1.7k

views

deseq2

updated 4.2 years ago by Michael Love 33k • written 4.2 years ago by wanziyi89 • 0

9

votes

7

replies

7.6k

views

deseq2 rnaseq pca tsne

updated 4.1 years ago by Kushal K Dey ▴ 10 • written 4.1 years ago by s.w.vanderlaan ▴ 30

9

votes

7

replies

6.5k

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deseq2 estimatesizefactors

updated 5.6 years ago by Michael Love 33k • written 5.6 years ago by ssabri ▴ 20

9

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6

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16k

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deseq2 multiple factor design

updated 6.2 years ago by Michael Love 33k • written 6.2 years ago by kmu004 ▴ 40

9

votes

14

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5.2k

views

deseq2 rna-seq

5.0 years ago • updated 4.9 years ago anand_mt ▴ 80