Bioconductor Rna

Showing : rna • reset

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584

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RNA RNASeqPower DEGseq

written 13 months ago by Jonathan • 0

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967

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GEO rnaseqGene RNA

17 months ago gallantk5 • 0

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1.9k

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fgsea rna

updated 22 months ago by James W. MacDonald 68k • written 22 months ago by Gordon • 0

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887

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RNA DESeq2

updated 23 months ago by Michael Love 43k • written 23 months ago by manuel • 0

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2.6k

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biomaRt ensembldb RNA ensembl

updated 2.7 years ago by Johannes Rainer ★ 2.1k • written 2.7 years ago by Christopher • 0

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3.5k

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Log2 edgeR RNA limma Normalization

3.1 years ago Sara • 0

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999

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RNASeq FeatureCounts Rna

3.2 years ago rridley3 • 0

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1.3k

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RNAseq ExperimentData RNAseq123 RNA ExperimentalDesign

updated 3.3 years ago by ATpoint ★ 5.0k • written 3.3 years ago by Mohamed ▴ 30

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1.2k

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MassSpectrometryData RNA DifferentialExpression

3.3 years ago António Miguel de Jesus Domingues ▴ 510

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1.5k

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RNA Alignment Rsubread

3.4 years ago • updated 3.3 years ago sreekalasn • 0

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1.7k

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RNAseq123 Rna

updated 3.5 years ago by Gordon Smyth 53k • written 3.5 years ago by Mikołaj Mierzejewski • 0

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2.6k

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RNA Combat sva R

3.6 years ago takemoto • 0

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1.2k

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methylation RNA native epitranscriptomics

updated 3.8 years ago by tcalvo ▴ 100 • written 3.8 years ago by megha.hs28 ▴ 10

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1.4k

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tximport rna rnaseqGene biomaRt

updated 4.0 years ago by ATpoint ★ 5.0k • written 4.0 years ago by st3472 • 0

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985

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RNA Normalization

4.7 years ago nancy • 0

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2.1k

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limma edgeR rna

4.7 years ago Nirad ▴ 10

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3.2k

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edgeR RNASeq

updated 5.1 years ago by Gordon Smyth 53k • written 5.1 years ago by weichengz ▴ 10

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3.6k

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annotation rna

updated 5.2 years ago by James W. MacDonald 68k • written 5.2 years ago by anthony.nash ▴ 20

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1.9k

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affy rna hta2.0 r

updated 5.6 years ago by James W. MacDonald 68k • written 5.6 years ago by Marco_aurelio • 0

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1.3k

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deseq2 RNA

updated 5.7 years ago by Michael Love 43k • written 5.7 years ago by agsousa • 0

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2.1k

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deseq2 RNA RNASeq

updated 5.8 years ago by Michael Love 43k • written 5.8 years ago by stephen.hartley • 0

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1.2k

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single cell RNA Data analysis Bioinformatics Job

6.5 years ago jmaanaki • 0

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2.0k

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RNA WGCNA filter

6.5 years ago modarzi ▴ 10

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1.3k

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RNA DESeq2

updated 6.7 years ago by Michael Love 43k • written 6.7 years ago by Merlin ▴ 10

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1.1k

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deseq2 RNA

updated 6.7 years ago by Michael Love 43k • written 6.7 years ago by Merlin ▴ 10

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2.2k

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rna singlecell limma

updated 6.7 years ago by Aaron Lun ★ 29k • written 6.7 years ago by Bioinformatician_R ▴ 20

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2.3k

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rna-seq rna

updated 6.7 years ago by Steve Lianoglou ★ 13k • written 6.7 years ago by Anthony Nash ▴ 20

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1.3k

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computational biology molecular biology RNA r-loop ncRNA Job

7.2 years ago l.brown ▴ 10

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1.4k

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r code rna wobble

7.9 years ago fawazfebin ▴ 60

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1.4k

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RNA rnaseq deseq2

updated 8.4 years ago by Michael Love 43k • written 8.4 years ago by Bioinformatician_R ▴ 20

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1.8k

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deseq2 RNA rnaseq

updated 8.4 years ago by Michael Love 43k • written 8.4 years ago by Bioinformatician_R ▴ 20

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2.5k

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outliers rna microarray

updated 8.6 years ago by chris86 ▴ 420 • written 8.6 years ago by bhgyu ▴ 30

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1.8k

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DGE rnaseq RNA edger

updated 8.6 years ago by londonflavido • 0 • written 8.6 years ago by Pietro ▴ 40

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2.5k

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RNA rna-seq science bioinformatics

updated 8.7 years ago by James W. MacDonald 68k • written 8.7 years ago by Bioinformatician_R ▴ 20

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5.0k

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RNA limma rsem edgeR

updated 8.7 years ago by Gordon Smyth 53k • written 8.7 years ago by Bioinformatician_R ▴ 20

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1.9k

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R bioconductor RNA mRNA RNA binding proteins

8.8 years ago Walter F. Baumann ▴ 10

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2.1k

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EdgeR deseq2 RNA differential expression

updated 9.3 years ago by Aaron Lun ★ 29k • written 9.3 years ago by tyssowski • 0

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5.6k

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RNA rnaseq Covariate adjustment deseq

updated 9.8 years ago by Michael Love 43k • written 9.8 years ago by sjs0282 • 0

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1.6k

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rna normalization

11.2 years ago aristotele_m ▴ 40

39 results • Page 1 of 1

Recent ...

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Comment: Bioinformatician at the Lausanne University Hospital by TikTsokaasocissalpc • 0

The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …

Comment: DECIPHER DesignProbes unable to design FISH-probes by TikTsokaasocissalpc • 0

If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…

Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k

I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…

Answer: wgcna module preseravtion taking too long? by ATpoint ★ 5.0k

WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

Votes

Limma-voom sample weights and impact on DEG numbers

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

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