Bioconductor Rna

Showing : rna • reset

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RNA RNASeqPower DEGseq

written 12 months ago by Jonathan • 0

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931

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GEO rnaseqGene RNA

16 months ago gallantk5 • 0

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fgsea rna

updated 21 months ago by James W. MacDonald 68k • written 22 months ago by Gordon • 0

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870

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RNA DESeq2

updated 22 months ago by Michael Love 43k • written 22 months ago by manuel • 0

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biomaRt ensembldb RNA ensembl

updated 2.7 years ago by Johannes Rainer ★ 2.1k • written 2.7 years ago by Christopher • 0

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Log2 edgeR RNA limma Normalization

3.0 years ago Sara • 0

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RNASeq FeatureCounts Rna

3.1 years ago rridley3 • 0

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RNAseq ExperimentData RNAseq123 RNA ExperimentalDesign

updated 3.2 years ago by ATpoint ★ 5.0k • written 3.2 years ago by Mohamed ▴ 30

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MassSpectrometryData RNA DifferentialExpression

3.3 years ago António Miguel de Jesus Domingues ▴ 510

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RNA Alignment Rsubread

3.3 years ago sreekalasn • 0

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RNAseq123 Rna

updated 3.5 years ago by Gordon Smyth 53k • written 3.5 years ago by Mikołaj Mierzejewski • 0

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RNA Combat sva R

3.5 years ago takemoto • 0

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methylation RNA native epitranscriptomics

updated 3.7 years ago by tcalvo ▴ 100 • written 3.7 years ago by megha.hs28 ▴ 10

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tximport rna rnaseqGene biomaRt

updated 3.9 years ago by ATpoint ★ 5.0k • written 3.9 years ago by st3472 • 0

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RNA Normalization

4.6 years ago nancy • 0

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limma edgeR rna

4.6 years ago Nirad ▴ 10

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edgeR RNASeq

updated 5.0 years ago by Gordon Smyth 53k • written 5.0 years ago by weichengz ▴ 10

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annotation rna

updated 5.1 years ago by James W. MacDonald 68k • written 5.1 years ago by anthony.nash ▴ 20

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affy rna hta2.0 r

updated 5.5 years ago by James W. MacDonald 68k • written 5.5 years ago by Marco_aurelio • 0

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deseq2 RNA

updated 5.6 years ago by Michael Love 43k • written 5.6 years ago by agsousa • 0

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deseq2 RNA RNASeq

updated 5.7 years ago by Michael Love 43k • written 5.7 years ago by stephen.hartley • 0

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single cell RNA Data analysis Bioinformatics Job

6.4 years ago jmaanaki • 0

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RNA WGCNA filter

6.4 years ago modarzi ▴ 10

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RNA DESeq2

updated 6.6 years ago by Michael Love 43k • written 6.6 years ago by Merlin ▴ 10

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deseq2 RNA

updated 6.6 years ago by Michael Love 43k • written 6.6 years ago by Merlin ▴ 10

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rna singlecell limma

updated 6.7 years ago by Aaron Lun ★ 29k • written 6.7 years ago by Bioinformatician_R ▴ 20

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rna-seq rna

updated 6.7 years ago by Steve Lianoglou ★ 13k • written 6.7 years ago by Anthony Nash ▴ 20

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computational biology molecular biology RNA r-loop ncRNA Job

7.1 years ago l.brown ▴ 10

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r code rna wobble

7.8 years ago fawazfebin ▴ 60

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RNA rnaseq deseq2

updated 8.3 years ago by Michael Love 43k • written 8.3 years ago by Bioinformatician_R ▴ 20

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deseq2 RNA rnaseq

updated 8.3 years ago by Michael Love 43k • written 8.3 years ago by Bioinformatician_R ▴ 20

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outliers rna microarray

updated 8.5 years ago by chris86 ▴ 420 • written 8.5 years ago by bhgyu ▴ 30

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DGE rnaseq RNA edger

updated 8.6 years ago by londonflavido • 0 • written 8.6 years ago by Pietro ▴ 40

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RNA rna-seq science bioinformatics

updated 8.6 years ago by James W. MacDonald 68k • written 8.6 years ago by Bioinformatician_R ▴ 20

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RNA limma rsem edgeR

updated 8.6 years ago by Gordon Smyth 53k • written 8.6 years ago by Bioinformatician_R ▴ 20

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R bioconductor RNA mRNA RNA binding proteins

8.7 years ago Walter F. Baumann ▴ 10

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EdgeR deseq2 RNA differential expression

updated 9.2 years ago by Aaron Lun ★ 29k • written 9.2 years ago by tyssowski • 0

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RNA rnaseq Covariate adjustment deseq

updated 9.8 years ago by Michael Love 43k • written 9.8 years ago by sjs0282 • 0

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rna normalization

11.2 years ago aristotele_m ▴ 40

39 results • Page 1 of 1

Recent ...

Replies

Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

Votes

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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