0
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0
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12
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Create multiple DoparParams with different number of registered cores
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3 hours ago ATpoint ★ 4.2k
0
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0
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31
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ligand-receptor-interactions for bulk RNAseq in R
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2 days ago silvaesilva.da • 0
0
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0
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40
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Otsu threshold segmentation using EBImage
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2 days ago medha.bulusu • 0
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0
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BiomaRt attribute "description" doesn't return NCBI's gene summary anymore
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3 days ago Reese • 0
0
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0
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42
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Scoreplot for OPLS
splots
3 days ago devarti.mahakalkar • 0
0
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4
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Single Cell Experiment : Differential Expression "List of length 0" - Help!
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4 days ago • updated 3 days ago vohara4 • 0
0
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0
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43
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Error in drawHeatmap function
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5 days ago • updated 3 days ago Johanna • 0
1
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4
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162
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error loading collectTRI regulon
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5 days ago • updated 3 days ago silvaesilva.da • 0
0
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0
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53
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Combining analysis of EPICv1 and EPICv2 using SeSAMe package
sesameData EPICv2 EPICv1
5 days ago archibold.mposhi • 0
0
votes
1
reply
219
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When I tried to use the functions from the celldex package to fetch information, I encountered the following error. How can I resolve this?"
celldex SingleR
updated 6 days ago by ★ 4.2k • written 8 days ago by • 0
0
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0
replies
102
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Amplican doesn't recognize forward reads fast q file
amplican
9 days ago landenshanie ▴ 40
0
votes
0
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90
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DEXSeq estimateDispersions - Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
DEXSeq
11 days ago Sara • 0
0
votes
3
replies
138
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STRINGdb server response time for mapping
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updated 11 days ago by ▴ 90 • written 12 days ago by • 0
1
vote
3
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212
views
STRINGdb v.2.16.4 does not render the plot [libpng error: Not a PNG file]
STRINGdb
updated 10 days ago by ▴ 90 • written 12 days ago by • 0
0
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0
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73
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does TMixClust recognise biological replicates
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13 days ago ta_awwad ▴ 10
0
votes
0
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100
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How to fix fix $PnR in flowCore
flowCore
updated 13 days ago by 66k • written 15 days ago by • 0
0
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0
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93
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Error in xj[i] : invalid subscript type 'list' when running jDUreport on Aspli
ASpli
updated 14 days ago by 66k • written 16 days ago by • 0
0
votes
0
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77
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EuroBioC2024 Registration is Open!
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17 days ago Maria Doyle ▴ 70
0
votes
0
replies
82
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Message 'invalid data format' on impute.MAR function
impute
17 days ago marcosdossantosferreira • 0
0
votes
0
replies
85
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scds creates sparse->dense coercion
scds
17 days ago Lluís Revilla Sancho ▴ 730
0
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0
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72
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Import_picrust2 question
microbiomeMarker
18 days ago Jay • 0
0
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0
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104
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gmapR source package contains x86_64 binaries
gmapR
21 days ago Tom Lin • 0
0
votes
0
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105
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conumee with Infinium MethylationEPIC v2.0
conumee
23 days ago Maximus • 0
1
vote
9
replies
485
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Cannot install oligo on Fedora
oligo source Install
23 days ago • updated 6 days ago Guido Hooiveld ★ 4.0k
0
votes
6
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641
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Using featureCounts with SAF annotation file gives "Error: only GTF files contain additional attributes"
RNASeq Rsubread
24 days ago • updated 18 days ago atan • 0
0
votes
0
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92
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Problem in execuation of filterAndTrim command in DADA2
Bioconductor dada2
26 days ago • updated 25 days ago abhisek001 • 0
0
votes
0
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93
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Conditional analysis
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26 days ago SuperDad • 0
0
votes
0
replies
93
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FindOverlaps, makeVennDiagram and "others"
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27 days ago • updated 26 days ago Raghad • 0
0
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0
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12
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Spam: Understanding Laser Hair Removal?
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28 days ago shahrozimmac 0
0
votes
0
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73
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Processing of curatedmetagenomics
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28 days ago Edward • 0
0
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0
replies
94
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scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
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29 days ago Bibi • 0
0
votes
0
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82
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Minor allele data from grch38 giving NAs from getBM ?
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4 weeks ago • updated 29 days ago Abiologist • 0
0
votes
3
replies
226
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STRINGdb : error with string_db$plot_network()
STRINGdb
updated 4 weeks ago by ▴ 90 • written 4 weeks ago by • 0
0
votes
0
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107
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determine k during RUVSeq
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4 weeks ago Ειρήνη • 0
0
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0
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ReactomeGSA for RNASeq
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4 weeks ago Shaimaa Gamal • 0
0
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0
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16
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Spam: Unveiling Unmatched Best Custom Patches
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4 weeks ago oliverelijhan 0
0
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0
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ChIPseeker peak_Profile_Heatmap color palette
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4 weeks ago Anton01 • 0
0
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0
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93
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GAGE results interpretation with gene-foldchange as input for cases of all-negative foldchange
GO KEGG gage pathview
4 weeks ago danalvoronov ▴ 10
0
votes
0
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query regarding how to apply WGCNA on replicates
replicatesRNAseq WGCNA
4 weeks ago k200987 • 0
0
votes
0
replies
88
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Difference in Contrast in DiffBind
DiffBind
4 weeks ago zzrammal • 0
0
votes
0
replies
97
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QSEA- Extraction of Normalized methylation across the samples
qsea ngsReports correlation
4 weeks ago Researcher • 0
1
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2
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315
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How can I create a eigencorplot of pca created from deseq2 object with PCAtools
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4 weeks ago BioinfGuru ▴ 30
0
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2
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166
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Problem finding certain variables when importing a public database GSE73103
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4 weeks ago Yveto • 0
0
votes
7
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503
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ChAMP installation issue
Cha ChAMP
updated 25 days ago by 66k • written 5 weeks ago by • 0
0
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0
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115
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Recommendations on deploying cytoviewer shiny.appobj to shinyapps.io?
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5 weeks ago neilzhao ▴ 30
2
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7
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deseq2 results
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5 weeks ago sajadahmad41454 • 0
0
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0
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Treeio as.treedata function seq lenght error
treeio
5 weeks ago nromerov • 0
0
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0
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130
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need help with Diffbind multiple groups
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5 weeks ago Dinesh • 0
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0
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161
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dba.plotProfile() plotting and interpretation
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6 weeks ago Henry ▴ 10
0
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0
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121
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flowStats for CyTOF
flowStats
6 weeks ago tholmes • 0
1,000 results • Page 1 of 20
Recent ...
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Answer: biomaRt has encountered an unknown server error while using getLDS by Mike Smith ★ 6.5k
There's a lot to unpack here! First, unfortunatley the getLDS funciontallity started failing with the release of BioMart 106. I've aske…
Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0
Well, I was looking at the result table (enrich18k@result, or yy@result in your example), and it gives every pathway even the non-significa…
Comment: Trouble reading samplesheet in with diffbind to create dba by Mallory • 0
Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …
Answer: Trouble reading samplesheet in with diffbind to create dba by Anthony • 0
I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …
Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
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Answer: biomaRt has encountered an unknown server error while using getLDS
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Answer: Get the latest gene name from Entrez ID
Get the latest gene name from Entrez ID
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